BAC Information

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BAC

Clone NameB6Ng01-067I14
Chromosome11 (Build37)
Map Location 93,331,476 - 93,529,597
singlet/doubletdoublet
Overlap geneCar10, LOC629636
Upstream geneLOC382545, LOC100039286
Downstream geneUtp18, Mbtd1, Nme2, Nme1, Spag9, LOC100039431, LOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3, Cacna1g, Spata20, Epn3, Mycbpap, Rsad1, BC018371, Chad, Lrrc59, Eme1, Mrpl27, Xylt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067I14.bB6Ng01-067I14.g
ACCDH886395DH886396
length143553
definitionDH886395|Mus musculus domesticus DNA, BAC clone: B6Ng01-067I14, 5' end.DH886396|Mus musculus domesticus DNA, BAC clone: B6Ng01-067I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,529,455 - 93,529,597)(93,331,476 - 93,332,034)
sequence
ctatgatgttactgtctatcttgtgttgtgagttggtggtagcttttcag
accccatgagtaccgagagtgagtaggtccaagggatgctttgttcctcc
tcctcttcctcctcctcttcctcctcctttaactcctcctcct
tgatgccaggagtttcttttctttctatatctgttgttggagaatatgca
aataaacaaactgatatacatttttttctgctaatagttggattgtccag
caaattaaacacccattgaagaaactacagttcagagaagttcagcaacc
tgtccaacagtgcacagcgaagtgtccatatcctgacacttttgttatat
agtccctggagtcctgtctgcctcacctacagggtttcctatctttgtag
gctgcagctcacactaaacactgtttagctagtaatggtctcagcatctc
tcttctgctgcagtctaatcttggctctactgctttcgaatatcttctgt
taactcttccaggtatccatgtgtctgtatggtcagagccatctcagctc
actggacagatccctgggcccttccaggttcctgatgttctagctagatt
aattgtatcaaagccagatgtgtttctggctttgatcccccaccacaaac
cacatacatgtacacactcacacagagagagagagagagagagggggggg
gag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_93529455_93529597
seq2: B6Ng01-067I14.b_53_195 (reverse)

seq1  AGGAGGAGGAGGGAAAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAA  50
      |||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGGAGTTAAAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAA  50

seq1  CAAAGCATCCCTTGGACCTACTCACTCTCGGTACTCATGGGGTCTGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATCCCTTGGACCTACTCACTCTCGGTACTCATGGGGTCTGAAAA  100

seq1  GCTACCACCAACTCACAACACAAGATAGACAGTAACATCATAG  143
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCACCAACTCACAACACAAGATAGACAGTAACATCATAG  143

seq1: chr11_93331476_93332034
seq2: B6Ng01-067I14.g_68_626

seq1  GAATTCTGATGCCAGGAGTTTCTTTTCTTTCTATATCTGTTGTTGGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATGCCAGGAGTTTCTTTTCTTTCTATATCTGTTGTTGGAGAA  50

seq1  TATGCAAATAAACAAACTGATATACATTTTTTTCTGCTAATAGTTGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAATAAACAAACTGATATACATTTTTTTCTGCTAATAGTTGGATT  100

seq1  GTCCAGCAAATTAAACACCCATTGAAGAAACTACAGTTCAGAGAAGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCAAATTAAACACCCATTGAAGAAACTACAGTTCAGAGAAGTTCA  150

seq1  GCAACCTGTCCAACAGTGCACAGCGAAGTGTCCATATCCTGACACTTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTGTCCAACAGTGCACAGCGAAGTGTCCATATCCTGACACTTTTG  200

seq1  TTATATAGTCCCTGGAGTCCTGTCTGCCTCACCTACAGGGTTTCCTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGTCCCTGGAGTCCTGTCTGCCTCACCTACAGGGTTTCCTATCT  250

seq1  TTGTAGGCTGCAGCTCACACTAAACACTGTTTAGCTAGTAATGGTCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGCTGCAGCTCACACTAAACACTGTTTAGCTAGTAATGGTCTCAG  300

seq1  CATCTCTCTTCTGCTGCAGTCTAATCTTGGCTCTACTGCTTTCGAATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCTTCTGCTGCAGTCTAATCTTGGCTCTACTGCTTTCGAATATC  350

seq1  TTCTGTTAACTCTTCCAGGTATCCATGTGTCTGTATGGTCAGAGCCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTAACTCTTCCAGGTATCCATGTGTCTGTATGGTCAGAGCCATCT  400

seq1  CAGCTCACTGGACAGATCCCTGGGCCCTTCCAGGTTCCTGATGTTCTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCACTGGACAGATCCCTGGGCCCTTCCAGGTTCCTGATGTTCTAGC  450

seq1  TAGATTAATTGTATCAAAGCCAGATGTGTTTCTGGCTTTGATCCCCCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTAATTGTATCAAAGCCAGATGTGTTTCTGGCTTTGATCCCCCACC  500

seq1  ACAAACCACATACATGTACACACTCACACAGAGAGAGAGAGAGAGAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCACATACATGTACACACTCACACAGAGAGAGAGAGAGAGAGAGG  550

seq1  GGGGGGGAG  559
      |||||||||
seq2  GGGGGGGAG  559