BAC Information

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BAC

Clone NameB6Ng01-068D01
Chromosome11 (Build37)
Map Location 48,916,834 - 48,917,028
singlet/doubletsinglet
Overlap geneOlfr56
Upstream geneLOC192895, Hn1l-ps2, LOC667163, LOC432554, Gnb2l1, Trim41, LOC100039945, Trim7, Irgm, EG432555, OTTMUSG00000005523, Psme2b-ps, LOC667214, Tgtp, LOC667219, 9930111J21Rik, LOC100039796, Ifi47
Downstream geneOlfr1396, Olfr1395, Olfr1394, Btnl9, Zfp62, Mgat1, Olfr1393, Olfr1392, Olfr10, Olfr1391, Olfr1390, LOC667286, Olfr1389, Olfr1388, Olfr1387, Olfr1386, Olfr1385, Olfr1549-ps1, Olfr1384, Olfr1383, Olfr1382, GA_x5J8B7TT7LR-4113-3651, Olfr1381, Olfr1380, Flt4, LOC100040032, Scgb3a1, Cnot6, LOC666899, LOC100040073, Gfpt2, Mapk9, Rasgef1c, Rnf130
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068D01.bB6Ng01-068D01.g
ACCDH886852DH886853
length1951,154
definitionDH886852|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D01, 5' end.DH886853|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agtggctcagagtagtctcacctattatgaaagcaaacagccacatgggg
gcagcagagagccaagaagcaagaaccaggcctgcgagtaagaaaggaat
ctctggctttgagtgtgtttgcttttcggtttttggtttttttccttggt
tgtattttgggttgtttgatttgggtttggatttggagggagggg
gaattctcaccggaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgcttgcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcacgcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatattccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagagcccagat
gtccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactaatcagctattaaaaagaacgaatttatgaaattcctaggcaa
tggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgaaatgtactcactgataagtgaatattaacccagaaatt
tagtatagcgagatataaggtacaatatgcaaaacatatgaaactgaaga
agaatgaagaccaaagtgtggacactttggtcattcttagaattggaaac
aatcacccatggaaggagttacagagacacattttggagctgagacaaaa
ggatcgtccatctagagactgccatatccagggatccatcccataattag
cctccaaatgatgacaccattgcatacactagcgagcctttggtgcaagg
atggtgatatagctgtcctttgtgagactaggccggggcctagcaaacac
agaagtggatgctcacagtcaactattggatggatcacagggccccaatg
agagctagagaagtatccaaggagctaagagatctgcaccttatcggtgg
aacacattatgaactaccagtacccagagctcttgactctagctgcattg
tatcaaagatgacttagtcgcatcctgcagaagagccatgattaagtaac
tcatagtccatacagggacaccatggccaaaatgtgaatgtcttgttgag
aagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_48916834_48917028
seq2: B6Ng01-068D01.b_57_251 (reverse)

seq1  CCCCTCCCTCCAAATCCAAACCCAAATCAAACAACCCAAAATACAACCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCTCCAAATCCAAACCCAAATCAAACAACCCAAAATACAACCAA  50

seq1  GGAAAAAAACCAAAAACCGAAAAGCAAACACACTCAAAGCCAGAGATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAACCAAAAACCGAAAAGCAAACACACTCAAAGCCAGAGATTCC  100

seq1  TTTCTTACTCGCAGGCCTGGTTCTTGCTTCTTGGCTCTCTGCTGCCCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTACTCGCAGGCCTGGTTCTTGCTTCTTGGCTCTCTGCTGCCCCCA  150

seq1  TGTGGCTGTTTGCTTTCATAATAGGTGAGACTACTCTGAGCCACT  195
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTGTTTGCTTTCATAATAGGTGAGACTACTCTGAGCCACT  195