BAC Information

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BAC

Clone NameB6Ng01-069N03
Chromosome11 (Build37)
Map Location 20,295,268 - 20,423,858
singlet/doubletdoublet
Overlap geneLOC382492
Upstream geneLOC100042708, Glns-ps1, LOC665868, LOC100041937, Spred2, Actr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746
Downstream geneSertad2, LOC665953, Aftph, 1110067D22Rik, LOC100042035, Peli1, Vps54, Ugp2, LOC100042081, 4932414J04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069N03.bB6Ng01-069N03.g
ACCDH888010DH888011
length1,1011,062
definitionDH888010|Mus musculus domesticus DNA, BAC clone: B6Ng01-069N03, 5' end.DH888011|Mus musculus domesticus DNA, BAC clone: B6Ng01-069N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,422,754 - 20,423,858)(20,295,268 - 20,296,340)
sequence
gaattcaatcgtaagtttagaaggtgctaactaaaggaaagaaaataaag
gtctagaaagggggacaaagtggttggagagatggctcagtgattaagag
cactgaccgctcttccaaaggttctgagttcaaatcccagcaaccacatg
atggctcacaaccatctgtaatgagatctaatgccctcttctggggtgtc
tgaagacagctacagtgtacttacatataataaataaataaatctttggg
ccagagcaagcagggctggagtgagcgaggccagggagagtggggccaga
gagacaggaaaaatgtgtctgaagagagctgcagtgtacttaacatataa
taaataaataaatcattaaaagagaaaaaaaaaagaaacaaagggggggg
gcaaaggtgtgcagcttctggggtggaggtgctgacaagaaggccccggg
ccccaaaagccagaaccttcgggcatgctttatgcaaagacacagcagaa
tcatggaatccaagaaagagtgaaagccaggtgagggccaatgaagtggc
cacacagtgtagaggagatgaagccgcgcatggggaaacttggtttggac
aatcaatcacctggatcgttggcacccgttctagaagtacctgccttcct
tcccagtgagagagagaagcctgggtttagttggcagttaggacaaaatt
tagatatattgttgtagttgatgggaaaagacaaatcaccagagaaactt
aaaaatctgtgtaatcttccacttgaaacctttccatggcttctttattt
ctggtgaagccacagcccctatggctcctccctctcagtttcccaacatc
ctctcccgcctcagctggtcacagcccctttgcacactggtcctgggcct
cttctgcaactgctgtagacgtgctcttcccctaccccatccctgcacgc
cctcaggtgtccttgattgtcatctctgcgacattcttcaggggaccatg
tataaaggtcccgattccaattatttttcttctctcccttcaccatcacc
tgcttggcataaaaaaacattgcagttatttcctctctgccctgggcatc
a
gaattcaaatcaatacgttgggtgccatttgtgttgtggtaaatctccaa
cccaaatacgccccggcaatgaaaacacaacacagataatatgattatat
gctgggtgcctagattgggcagatctatacactaccctcttccacatcta
tgagaccccttagaacttgcagtttctccagccatgtgcttctgctccac
ttttcttcttcttcctcttcctcctcctcctcctctgcatcctctccctc
ttccattttttccttcttctccctccctgttcctctccacctttccttta
tctgcccaatcatcagctctcctttattttacaaattaaggtgggaagca
ggtttacaggaaatcacctgagtgctgactcattccttgtttgcagcccc
tcacaggagaatggaattaacatcaaatataattagccccaggactatcc
acaacatgtagccacagaaggagccagaaagtaaatggcttctttataaa
gggaagaaaataaggggacaggttccacttagggtctcatgctgtgttta
taatctaagtctgaggtgaggtccccgccctcccaggtgaggctgaggct
tacctcatgaggctgagctacccaccatctaaccagtattgatgctacat
agagagtcaaaggatgccctggcctggaaaaattgacctggtttaaatat
tggcaggaatgagctgggatctcactgaggctgccttcccttgagttacc
catgacctggcgggtgataaaggtcttgcgagtgctttgtgtggcttccg
tgcacgtagcagcaggaccaatattttgctttctgatcccgaaagtgagg
cgctgctgggactttctgatgctgctcagtcagcatctgctgcgaaatac
ccacaagaggtctgggctctgggccctgggccctgtgagcactcactggc
tgagcttgatgctctgtggtctttccgaaacacacacataacacacagag
cagttgggacgttggacagcgctgccttgtactaggccatgcagccagat
cacagaggcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_20422754_20423858
seq2: B6Ng01-069N03.b_47_1147 (reverse)

seq1  TGATGCCCCAAGGGGCAGAGAGAAAATAACTGCAATG-TTTTTTATGCCA  49
      ||||||||    |||||||||| |||||||||||||| ||||||||||||
seq2  TGATGCCC---AGGGCAGAGAGGAAATAACTGCAATGTTTTTTTATGCCA  47

seq1  GACA-GTGATGGGTGAAGGGGAGAGAAGGAAAAATAATTGGAATTCGGGG  98
        || ||||| |||||| ||||||||| ||||||||||||||||   |||
seq2  AGCAGGTGAT-GGTGAA-GGGAGAGAA-GAAAAATAATTGGAAT--CGGG  92

seq1  ACCTTTTATACATGGTCCCCTGAAGAATGTCTGCAGAGATGACAATCAAG  148
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACC-TTTATACATGGTCCCCTGAAGAATGTC-GCAGAGATGACAATCAAG  140

seq1  GACACCCTGAGGGCGTGCAGGGATGGGGTAGGGG-AGAGCACGTCTACAG  197
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  GACA-CCTGAGGGCGTGCAGGGATGGGGTAGGGGAAGAGCACGTCTACAG  189

seq1  CAG-TGCAG-AGAGG-CCAGGACCAGTGTGC-AAGGGGCTGTGACCAGCT  243
      ||| ||||| ||||| ||||||||||||||| ||||||||||||||||||
seq2  CAGTTGCAGAAGAGGCCCAGGACCAGTGTGCAAAGGGGCTGTGACCAGCT  239

seq1  GAGGCGGGAGAGGATGTTGGGAAACTGAGAGGGAGGAGCCATAGGGGCTG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGGGAGAGGATGTTGGGAAACTGAGAGGGAGGAGCCATAGGGGCTG  289

seq1  TGGCTTCACCAGAAATAAAGAAGCCATGGAAAGGTTTCAAGTGGAAGATT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCACCAGAAATAAAGAAGCCATGGAAAGGTTTCAAGTGGAAGATT  339

seq1  ACACAGATTTTTAAGTTTCTCTGGTGATTTGTCTTTTCCCATCAACTACA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGATTTTTAAGTTTCTCTGGTGATTTGTCTTTTCCCATCAACTACA  389

seq1  ACAATATATCTAAATTTTGTCCTAACTGCCAACTAAACCCAGGCTTCTCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATATCTAAATTTTGTCCTAACTGCCAACTAAACCCAGGCTTCTCT  439

seq1  CTCTCACTGGGAAGGAAGGCAGGTACTTCTAGAACGGGTGCCAACGATCC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTGGGAAGGAAGGCAGGTACTTCTAGAACGGGTGCCAACGATCC  489

seq1  AGGTGATTGATTGTCCAAACCAAGTTTCCCCATGCGCGGCTTCATCTCCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATTGATTGTCCAAACCAAGTTTCCCCATGCGCGGCTTCATCTCCT  539

seq1  CTACACTGTGTGGCCACTTCATTGGCCCTCACCTGGCTTTCACTCTTTCT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTGTGTGGCCACTTCATTGGCCCTCACCTGGCTTTCACTCTTTCT  589

seq1  TGGATTCCATGATTCTGCTGTGTCTTTGCATAAAGCATGCCCGAAGGTTC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCCATGATTCTGCTGTGTCTTTGCATAAAGCATGCCCGAAGGTTC  639

seq1  TGGCTTTTGGGGCCCGGGGCCTTCTTGTCAGCACCTCCACCCCAGAAGCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTGGGGCCCGGGGCCTTCTTGTCAGCACCTCCACCCCAGAAGCT  689

seq1  GCACACCTTTGCCCCCCCCCTTTGTTTCTTTTTTTTTTCTCTTTTAATGA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCTTTGCCCCCCCCCTTTGTTTCTTTTTTTTTTCTCTTTTAATGA  739

seq1  TTTATTTATTTATTATATGTTAAGTACACTGCAGCTCTCTTCAGACACAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTATATGTTAAGTACACTGCAGCTCTCTTCAGACACAT  789

seq1  TTTTCCTGTCTCTCTGGCCCCACTCTCCCTGGCCTCGCTCACTCCAGCCC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGTCTCTCTGGCCCCACTCTCCCTGGCCTCGCTCACTCCAGCCC  839

seq1  TGCTTGCTCTGGCCCAAAGATTTATTTATTTATTATATGTAAGTACACTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCTCTGGCCCAAAGATTTATTTATTTATTATATGTAAGTACACTG  889

seq1  TAGCTGTCTTCAGACACCCCAGAAGAGGGCATTAGATCTCATTACAGATG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTCTTCAGACACCCCAGAAGAGGGCATTAGATCTCATTACAGATG  939

seq1  GTTGTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTTGGAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAGCCATCATGTGGTTGCTGGGATTTGAACTCAGAACCTTTGGAA  989

seq1  GAGCGGTCAGTGCTCTTAATCACTGAGCCATCTCTCCAACCACTTTGTCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGGTCAGTGCTCTTAATCACTGAGCCATCTCTCCAACCACTTTGTCC  1039

seq1  CCCTTTCTAGACCTTTATTTTCTTTCCTTTAGTTAGCACCTTCTAAACTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTAGACCTTTATTTTCTTTCCTTTAGTTAGCACCTTCTAAACTT  1089

seq1  ACGATTGAATTC  1105
      ||||||||||||
seq2  ACGATTGAATTC  1101

seq1: chr11_20295268_20296340
seq2: B6Ng01-069N03.g_68_1129

seq1  GAATTCAAATCAATACGTTGGGTGCCATTTGTGTTGTGGTAAATCTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCAATACGTTGGGTGCCATTTGTGTTGTGGTAAATCTCCAA  50

seq1  CCCAAATACGCCCCGGCAATGAAAACACAACACAGATAATATGATTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATACGCCCCGGCAATGAAAACACAACACAGATAATATGATTATAT  100

seq1  GCTGGGTGCCTAGATTGGGCAGATCTATACACTACCCTCTTCCACATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTGCCTAGATTGGGCAGATCTATACACTACCCTCTTCCACATCTA  150

seq1  TGAGACCCCTTAGAACTTGCAGTTTCTCCAGCCATGTGCTTCTGCTCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCCCTTAGAACTTGCAGTTTCTCCAGCCATGTGCTTCTGCTCCAC  200

seq1  TTTTCTTCTTCTTCCTCTTCCTCCTCCTCCTCCTCTGCATCCTCTCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTTCTTCCTCTTCCTCCTCCTCCTCCTCTGCATCCTCTCCCTC  250

seq1  TTCCATTTTTTCCTTCTTCTCCCTCCCTGTTCCTCTCCACCTTTCCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTTTCCTTCTTCTCCCTCCCTGTTCCTCTCCACCTTTCCTTTA  300

seq1  TCTGCCCAATCATCAGCTCTCCTTTATTTTACAAATTAAGGTGGGAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCAATCATCAGCTCTCCTTTATTTTACAAATTAAGGTGGGAAGCA  350

seq1  GGTTTACAGGAAATCACCTGAGTGCTGACTCATTCCTTGTTTGCAGCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTACAGGAAATCACCTGAGTGCTGACTCATTCCTTGTTTGCAGCCCC  400

seq1  TCACAGGAGAATGGAATTAACATCAAATATAATTAGCCCCAGGACTATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGAGAATGGAATTAACATCAAATATAATTAGCCCCAGGACTATCC  450

seq1  ACAACATGTAGCCACAGAAGGAGCCAGAAAGTAAATGGCTTCTTTATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATGTAGCCACAGAAGGAGCCAGAAAGTAAATGGCTTCTTTATAAA  500

seq1  GGGAAGAAAATAAGGGGACAGGTTCCACTTAGGGTCTCATGCTGTGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAAAATAAGGGGACAGGTTCCACTTAGGGTCTCATGCTGTGTTTA  550

seq1  TAATCTAAGTCTGAGGTGAGGTCCCCGCCCTCCCAGGTGAGGCTGAGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTAAGTCTGAGGTGAGGTCCCCGCCCTCCCAGGTGAGGCTGAGGCT  600

seq1  TACCTCATGAGGCTGAGCTACCCACCATCTAACCAGTATTGATGCTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCATGAGGCTGAGCTACCCACCATCTAACCAGTATTGATGCTACAT  650

seq1  AGAGAGTCAAAGGATGCCCTGGCCTGGAAAAATTGACCTGGTTTAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTCAAAGGATGCCCTGGCCTGGAAAAATTGACCTGGTTTAAATAT  700

seq1  TGGCAGGAATGAGCTGGGATCTCACTGAGGCTGCCTTCCCTTGAGTTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGAATGAGCTGGGATCTCACTGAGGCTGCCTTCCCTTGAGTTACC  750

seq1  CATGACCTGGCGGGTGATAAAGGTCTTGCGAGTGCTTTGTGTGGCTTCCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTGGCGGGTGATAAAGGTCTTGCGAGTGCTTTGTGTGGCTTCCG  800

seq1  TGCACGTAGCAGGCAGGACCAATA-TTTGCTTTCTGATCCCGAAAGTGAG  849
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  TGCACGTAGCA-GCAGGACCAATATTTTGCTTTCTGATCCCGAAAGTGAG  849

seq1  GCGCTGCTGGGACTTTCTGATGCTGCTCAGTCAGCATCTGCTGCGAAATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTGCTGGGACTTTCTGATGCTGCTCAGTCAGCATCTGCTGCGAAATA  899

seq1  CCCACAAGAAGGTTCTGGGCTCTGGGCCCTGGGCCCTGGTGAGCACTCAC  949
      |||||||||  | |||||||||||||||||||||||| ||||||||||||
seq2  CCCACAAGA--GGTCTGGGCTCTGGGCCCTGGGCCCT-GTGAGCACTCAC  946

seq1  TGGCTGAAGCTTGGATGCTCTGTGTTCTTTCCGGAAACACACACATACAC  999
      |||||| ||||| ||||||||||| ||||||| |||||||||||||| ||
seq2  TGGCTG-AGCTT-GATGCTCTGTGGTCTTTCC-GAAACACACACATA-AC  992

seq1  ACACAAGAGCAGTTGGGACGTTGGGACAGCGCTGGCTTTGTAACTAGGCA  1049
      |||| ||||||||||||||||| |||||||||| || |||| ||||||| 
seq2  ACAC-AGAGCAGTTGGGACGTT-GGACAGCGCT-GCCTTGT-ACTAGGCC  1038

seq1  CTGCAGCCAGATCACAGAGGCAGC  1073
       |||||||||||||||||||||||
seq2  ATGCAGCCAGATCACAGAGGCAGC  1062