BAC Information

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BAC

Clone NameB6Ng01-070B03
Chromosome11 (Build37)
Map Location 111,455,020 - 111,456,212
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041523, Kcnj16, Kcnj2, LOC667003, LOC100041539
Downstream geneLOC100041559, EG629966, LOC629967, LOC100041589, LOC100043020, EG668396, EG667038
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070B03.bB6Ng01-070B03.g
ACCDH888183DH888184
length1,2421,188
definitionDH888183|Mus musculus domesticus DNA, BAC clone: B6Ng01-070B03, 5' end.DH888184|Mus musculus domesticus DNA, BAC clone: B6Ng01-070B03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtatcaaaaacgttgaagctgggttggtgattccgtctttttc
ctgagggtcctatctatctcctggaggtggtctcttcaggttccatctct
cagctgttggccatttcagctaaagtcatctccattgagtcctggctact
tctcaaattgcaggtctctgggttcccccctaacccctaccctcagaagc
tgcatattcccattcattcccctggccctctgggcttctctcctgttgcc
ccgttatacctgatcctgtcctctttcccctcccacccaggttcctcttt
tcctttgacttctgtcattattttgttccctctcctaagtgggattgaag
cattatcagttgtaccttccttcttgtttaacttcttacagtctatggat
tttattatgggtattctaaacgttttggctaatatccactcatcagtgag
gacatatcatgcatgtccttttgggtctggcttacctcactcaggatatt
ttctagttccatccatttgcctgcaagccccatgatgtcctcatttctaa
tagctgaattgtaccccatcacgtaaatgaaccacatattctgtatccat
tcttcagttgatggacatctgtggcatttccagcttctggccatcacaga
taaggctgctatgaacataatggtgcatgtggccttgtggtatagtggag
catcttttggatgtatgccctggagctgtatatttgggtctttgagtaga
actgtttccaatttcctgaggaaccgccagactggtttctagtgtggttt
taccagtttgcaatcccaccagcaatggaggagtgttcctttctccacat
ccttaccagcatgtgcagtcacttgagtttttgattctgattgatgtaaa
gtggaatcacagagagagcaaaatggagcagagactgaagtaaaggccat
ttactgactggccaacatggaatctattccgtggatgggtaccaaaccct
gactttatactaatgttatgttgggcttgcaaacagaacctagcatagct
gggttgtcttctagacttgacagccagactgagacagtgcagatacttta
aagcccaatcattgaactgagtcatgggacctatggaagagtaggggaag
attgagaccttagatgcagctctagagacattgttactagcttggacctt
tagagatccagagtctagaacctcaccacaggcctaacctga
gaattcaagaagtagggactgtgaaaggattatgggtcttcgctatggtc
ttctgtgtctgaagattcaagtgttttagatttctgtctttataaaccgt
atgcagcatctgattttgtgttgataatgacaggtacatatccattgtca
aagagagctcacagagttgtttttgtagtaagggttgcgtatggctgggt
tttattaaattcactgaaggaacaatactaaaacatacaaaaaaaaaata
aattatccaaagaccagcttggcattgcagtttcttcctattataccata
aataatatctaacaactctctcaaagctgggactacattcaaatattgat
tatatagagttaaaaattctaaatttccctgaaaattttggtgttcttta
attttctaagactgtgaaagatatttatggatgaaacataataatttttt
aggaaagaatgggaagtctaaagaggaaaccattaaaaacctttaaccta
aaacatcatgtataagaaaaatgaaaatccaagttgacgttaatatttcc
aatcttaaccagaaacaaatttagctaaaattttaaaattgagaaaaaca
atcaacatgaaatctcactttttgagaacttcagtcctaacttgattgaa
ttctagacaacaaattacttggaaaacttccttgctatgttttatgcttt
aaatattgtttttatgggatagaaagatggttcagtcattaagagcactg
gatgcccttttagaggacccaggttcaattcccagaacacacacagcagt
cccaaacatctgtaactacagtcccagattatctgatatcccttatggct
gctgcgagtaccaggcacacaagcatacattcaggtgaaccacttataca
cataaatacaataaatatgtgtttttattatatatggtgagaatttatat
actgtatctggaatatattcacctcatcccaacctcatccaaagtccatc
tctctttcatggcaacttcaattgtgtttcacaattattttaaacccgca
gaatctgatttatgctgctatttattcttgggtgtgtggctatctaacac
ttctacaatgtgcacttattgaattttaaactattatttagctgctattt
ttacttataaggccatccaattaaatttactttattac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_111455020_111456212
seq2: B6Ng01-070B03.g_65_1252 (reverse)

seq1  GTAATAAAGTAAAATTTTATTTTGATTGCC-TATAAGT-AAAATAGCAGC  48
      |||||||||||||  |||| || ||| ||| ||||||| |||||||||||
seq2  GTAATAAAGTAAA--TTTAATTGGATGGCCTTATAAGTAAAAATAGCAGC  48

seq1  TTAAATGAATAGTTTTAAAATTCAATAAGTGCACATTGTAGAAGTTGTTA  98
       ||||| ||||| ||||||||||||||||||||||||||||||| |||||
seq2  -TAAAT-AATAG-TTTAAAATTCAATAAGTGCACATTGTAGAAG-TGTTA  94

seq1  GATAGCCACACACCCAAGAATAAATAGCAGCATAAATCAGATTCTGCGGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCACACACCCAAGAATAAATAGCAGCATAAATCAGATTCTGCGGG  144

seq1  TTTAAAATAAATTGTGAAACACAATTG-AGTTGCCATGAAAGAGAGATGG  197
      |||||||| |||||||||||||||||| ||||||||||||||||||||||
seq2  TTTAAAAT-AATTGTGAAACACAATTGAAGTTGCCATGAAAGAGAGATGG  193

seq1  ACTTTGGATGAGGTTGGGATGAGGTGAATATATTCCAGATACAGTATATA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGATGAGGTTGGGATGAGGTGAATATATTCCAGATACAGTATATA  243

seq1  AATTCTCACCATATATAATAAAAACACATATTTATTGTATTTATGTGTAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCACCATATATAATAAAAACACATATTTATTGTATTTATGTGTAT  293

seq1  AAGTGGTTCACCTGAATGTATGCTTGTGTGCCTGGTACTCGCAGCAGCCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTTCACCTGAATGTATGCTTGTGTGCCTGGTACTCGCAGCAGCCA  343

seq1  TAAGGGATATCAGATAATCTGGGACTGTAGTTACAGATGTTTGGGACCTG  397
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAAGGGATATCAGATAATCTGGGACTGTAGTTACAGATGTTTGGGA-CTG  392

seq1  CTGTGTGTGTTCTGGGAATTGAACCTGGGTCCTCTAAAAGGGCATCCAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTGTTCTGGGAATTGAACCTGGGTCCTCTAAAAGGGCATCCAGT  442

seq1  GCTCTTAATGACTGAACCATCTTTCTATCCCATAAAAACAATATTTAAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAATGACTGAACCATCTTTCTATCCCATAAAAACAATATTTAAAG  492

seq1  CATAAAACATAGCAAGGAAGTTTTCCAAGTAATTTGTTGTCTAGAATTCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAACATAGCAAGGAAGTTTTCCAAGTAATTTGTTGTCTAGAATTCA  542

seq1  ATCAAGTTAGGACTGAAGTTCTCAAAAAGTGAGATTTCATGTTGATTGTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTTAGGACTGAAGTTCTCAAAAAGTGAGATTTCATGTTGATTGTT  592

seq1  TTTCTCAATTTTAAAATTTTAGCTAAATTTGTTTCTGGTTAAGATTGGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAATTTTAAAATTTTAGCTAAATTTGTTTCTGGTTAAGATTGGAA  642

seq1  ATATTAACGTCAACTTGGATTTTCATTTTTCTTATACATGATGTTTTAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAACGTCAACTTGGATTTTCATTTTTCTTATACATGATGTTTTAGG  692

seq1  TTAAAGGTTTTTAATGGTTTCCTCTTTAGACTTCCCATTCTTTCCTAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGTTTTTAATGGTTTCCTCTTTAGACTTCCCATTCTTTCCTAAAA  742

seq1  AATTATTATGTTTCATCCATAAATATCTTTCACAGTCTTAGAAAATTAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTATGTTTCATCCATAAATATCTTTCACAGTCTTAGAAAATTAAA  792

seq1  GAACACCAAAATTTTCAGGGAAATTTAGAATTTTTAACTCTATATAATCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCAAAATTTTCAGGGAAATTTAGAATTTTTAACTCTATATAATCA  842

seq1  ATATTTGAATGTAGTCCCAGCTTTGAGAGAGTTGTTAGATATTATTTATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGAATGTAGTCCCAGCTTTGAGAGAGTTGTTAGATATTATTTATG  892

seq1  GTATAATAGGAAGAAACTGCAATGCCAAGCTGGTCTTTGGATAATTTATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATAGGAAGAAACTGCAATGCCAAGCTGGTCTTTGGATAATTTATT  942

seq1  TTTTTTTTGTATGTTTTAGTATTGTTCCTTCAGTGAATTTAATAAAACCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGTATGTTTTAGTATTGTTCCTTCAGTGAATTTAATAAAACCC  992

seq1  AGCCATACGCAACCCTTACTACAAAAACAACTCTGTGAGCTCTCTTTGAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATACGCAACCCTTACTACAAAAACAACTCTGTGAGCTCTCTTTGAC  1042

seq1  AATGGATATGTACCTGTCATTATCAACACAAAATCAGATGCTGCATACGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATATGTACCTGTCATTATCAACACAAAATCAGATGCTGCATACGG  1092

seq1  TTTATAAAGACAGAAATCTAAAACACTTGAATCTTCAGACACAGAAGACC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAGACAGAAATCTAAAACACTTGAATCTTCAGACACAGAAGACC  1142

seq1  ATAGCGAAGACCCATAATCCTTTCACAGTCCCTACTTCTTGAATTC  1193
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCGAAGACCCATAATCCTTTCACAGTCCCTACTTCTTGAATTC  1188