BAC Information

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BAC

Clone NameB6Ng01-070G09
Chromosome11 (Build37)
Map Location 121,287,579 - 121,288,478
singlet/doubletsinglet
Overlap geneBC032265
Upstream geneNploc4, Tspan10, Pde6g, 1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12, Slc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b
Downstream geneFn3k, Tbcd, Zfp750, B3gntl1, Metrnl, Ptchd3, LOC667879, LOC674842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070G09.g
ACCDH888416
length893
definitionDH888416|Mus musculus domesticus DNA, BAC clone: B6Ng01-070G09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatggttgggattttcttaatttgggggagacacgtgaagttg
ggaccatttcaaagcataacaagcttatttttgacactgttatgagtccc
tccatcccagtgcatcctctgcaacttggttctgcttctagaatagctag
tgtcttggttattgagtctgctaaagcaggcactgttctgggtgatgggg
gggtgtcttgcttatttatgggtgcaagcattagggggtaagggcatatt
gattgcaaaacaacaaccctgagctgcaagagcggacccgagggtctcct
agagcaaggggacaagctagtcacttttctttgtttcttttttttttttg
tggaagggaaaggaggtgaacaggcagagcggcagtatgtggaccagttt
gggtttgatgtagtgacatgctgtggatacctcccccaggtgagtggcac
agagctcacttccacgtcacagtcagactggctgttgagacacagtgggg
aaactaccctactccttttctgtaaggttttgtaagtctttaaactcttt
tttccctgataatttttaagaagttgacatgaagtaaataaacttaatgt
tggattaagatgaaaaatcagacagaagaaacagcaagttaggatgctgg
tcttcaaggaggggttaaaatctggggtaatgctgtggcctatggtgatg
ccaaagcagttgtggtcatcctaagactgcacatttgcagtgcagtgagc
accatggggtatggttggtacagtgtgtcctagacacactgaaaaaaaca
ggaatattgatggggcctgaaagccacgtgatatggtgaaaatttgtcgc
tttcttttgctatttatattattattttattatgatttaattt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_121287579_121288478
seq2: B6Ng01-070G09.g_66_958

seq1  GAATTCCTATGGTTGGGATTTTCTTAATTTGGGGGAGACACGTGAAGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATGGTTGGGATTTTCTTAATTTGGGGGAGACACGTGAAGTTG  50

seq1  GGACCATTTCAAAGCATAACAAGCTTATTTTTGACACTGTTATGAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATTTCAAAGCATAACAAGCTTATTTTTGACACTGTTATGAGTCCC  100

seq1  TCCATCCCAGTGCATCCTCTGCAACTTGGTTCTGCTTCTAGAATAGCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCCAGTGCATCCTCTGCAACTTGGTTCTGCTTCTAGAATAGCTAG  150

seq1  TGTCTTGGTTATTGAGTCTGCTAAAGCAGGCACTGTTCTGGGTGATGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGTTATTGAGTCTGCTAAAGCAGGCACTGTTCTGGGTGATGGGG  200

seq1  GGGTGTCTTGCTTATTTATGGGTGCAAGCATTAGGGGGTAAGGGCATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCTTGCTTATTTATGGGTGCAAGCATTAGGGGGTAAGGGCATATT  250

seq1  GATTGCAAAACAACAACCCTGAGCTGCAAGAGCGGACCCGAGGGTCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCAAAACAACAACCCTGAGCTGCAAGAGCGGACCCGAGGGTCTCCT  300

seq1  AGAGCAAGGGGACAAGCTAGTCACTTTTCTTTGTTTCTTTTTTTTTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGGGGACAAGCTAGTCACTTTTCTTTGTTTCTTTTTTTTTTTTG  350

seq1  TGGAAGGGAAAGGAGGTGAACAGGCAGAGCGGCAGTATGTGGACCAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGGAAAGGAGGTGAACAGGCAGAGCGGCAGTATGTGGACCAGTTT  400

seq1  GGGTTTGATGTAGTGACATGCTGTGGATACCTCCCCCAGGTGAGTGGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGATGTAGTGACATGCTGTGGATACCTCCCCCAGGTGAGTGGCAC  450

seq1  AGAGCTCACTTCCACGTCACAGTCAGACTGGCTGTTGAGACACAGTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCACTTCCACGTCACAGTCAGACTGGCTGTTGAGACACAGTGGGG  500

seq1  AAACTACCCTACTCCTTTTCTGTAAGGTTTTGTAAGTCTTTAAACTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACCCTACTCCTTTTCTGTAAGGTTTTGTAAGTCTTTAAACTCTTT  550

seq1  TTTCCCTGATAATTTTTAAGAAGTTGACATGAAGTAAATAAACTTAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTGATAATTTTTAAGAAGTTGACATGAAGTAAATAAACTTAATGT  600

seq1  TGGATTAAGATGAAAAATCAGACAGAAGAAACAGCAAGTTAGGATGCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTAAGATGAAAAATCAGACAGAAGAAACAGCAAGTTAGGATGCTGG  650

seq1  TCTTCAAGGAGGGGTTAAAATCTGGGGTAATGCTGTGGCCTATGGTGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAGGAGGGGTTAAAATCTGGGGTAATGCTGTGGCCTATGGTGATG  700

seq1  CCAAAGCAGTTGTGGTCATCCTAAGACTGCACATTTGCAGTGCAGTGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCAGTTGTGGTCATCCTAAGACTGCACATTTGCAGTGCAGTGAGC  750

seq1  ACCAT-GGGTATGGTTGGTACAGTGTGTCCTAGACACACTGAAAAAAACA  799
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGGGTATGGTTGGTACAGTGTGTCCTAGACACACTGAAAAAAACA  800

seq1  GGAAATATTGAT-GGGCCTG-AAGCCACGTGATATGGTGAAAATTTGTAG  847
      || ||||||||| ||||||| ||||||||||||||||||||||||||| |
seq2  GG-AATATTGATGGGGCCTGAAAGCCACGTGATATGGTGAAAATTTGTCG  849

seq1  CTTTTCTTTTGCTTATTTTTATTATTTATTTATTTTATTTATGTATTTAA  897
      | |||||||||| ||||| |||||     |||||||| ||||| ||||||
seq2  C-TTTCTTTTGC-TATTTATATTA-----TTATTTTA-TTATG-ATTTAA  890

seq1  TTT  900
      |||
seq2  TTT  893