BAC Information

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BAC

Clone NameB6Ng01-071A04
Chromosome11 (Build37)
Map Location 92,831,041 - 92,963,053
singlet/doubletdoublet
Overlap geneLOC100039286, Car10
Upstream geneLOC382545
Downstream geneLOC629636, Utp18, Mbtd1, Nme2, Nme1, Spag9, LOC100039431
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071A04.bB6Ng01-071A04.g
ACCDH888832DH888833
length688779
definitionDH888832|Mus musculus domesticus DNA, BAC clone: B6Ng01-071A04, 5' end.DH888833|Mus musculus domesticus DNA, BAC clone: B6Ng01-071A04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,962,367 - 92,963,053)(92,831,041 - 92,831,819)
sequence
gaattcctactgtgtgcagtaaagtaagaattctcactgtgtgtaaaagg
gaatgacctcagacttctcttgtctactatatggacataactctctaaag
tattacaatggcatgtgttttagtagggtggccaagctccaaacatgatt
tcacataaacagagtcccattctgtctttggaggagattgaaattaaaca
gcagtatctagaactgggtccaaagtaaagaaaagacagaagggggtctt
aatagccagactcagatctgatttaggaggtggggactggcaaaactaaa
ggaggaggcatgaaacctgtcctactccaaagctgcccaagcatatctgc
tcaaaaaggcagggctcctgctcatctacctatggagacttcatgggaag
ttggctcagtccctaattctgcagagggaatgcaggcagaagagagaact
gcaaatgggctacaccctgagcgcttaaatggcaggtgcaagggagtggg
tgctggtcgatgggaggagccaaaggactgggaaatgtctacatagttcc
ctccaagcctatattcctgcaccaagaaagatacatcttggaaatgacag
ttcctcccaacacaggatactaagatacaggcaagcacaaaccctgcctt
agtcacctcaacacccaccctgggggggggggggggga
gaattctttatcattttgttttccgttttgttttacttgcaaaggatcct
cagtgctgagagcattaagtaccaggctctgaaaaattagctaatgaata
aacttgttaatatttcagctatgcccttatcacccaaatgcttaataagt
acaaagcacaattctgctactacagggaattcaaagttaagtcatagtcc
acacccgaggagcatagtgtctgaactgaaatgacaatggctgttctaac
ctgttctacttgttccaacccagtggcaaagctgagtgcccattgcctta
agaaagacttaagcgatatataagacatcaaaagtctaatgcagaatttg
gtgatgagagagagctcacatggaatgaaggacattttaattggacttga
gggaaaaatgcatagactttaatattcaataacattttagttgtcacctc
acagaatcactgaaaaaaaaaatagtcatgatctttgcaccagagtttcc
attccagagagagacagagtggcaaatacataattaacaggtaaactgct
gagcacatataaagtaagcatgagctggtaactgctataaaggaaagtaa
aatagataaagaggaatgaaaagaaaacgtggtttttctagtctaacagg
gaagaaaatatatggacttggtatagcaaccacactcctgggtagttccc
aagcctaagggtagtaggccaacacagcacaaagtgcattccatgtttgt
tttgtgtgtgtgtgtgtgagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92962367_92963053
seq2: B6Ng01-071A04.b_41_728 (reverse)

seq1  -TCCCCCCCCCCCCCCCAGGGTGGGTGTTGAGGTGACTAAGGCAGGGTTT  49
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCCCCCCCCCCCAGGGTGGGTGTTGAGGTGACTAAGGCAGGGTTT  50

seq1  GTGCTTGCCTGTATCTTAGTATCCTGTGTTGGGAGGAACTGTCATTTCCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGCCTGTATCTTAGTATCCTGTGTTGGGAGGAACTGTCATTTCCA  100

seq1  AGATGTATCTTTCTTGGTGCAGGAATATAGGCTTGGAGGGAACTATGTAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTATCTTTCTTGGTGCAGGAATATAGGCTTGGAGGGAACTATGTAG  150

seq1  ACATTTCCCAGTCCTTTGGCTCCTCCCATCGACCAGCACCCACTCCCTTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCCAGTCCTTTGGCTCCTCCCATCGACCAGCACCCACTCCCTTG  200

seq1  CACCTGCCATTTAAGCGCTCAGGGTGTAGCCCATTTGCAGTTCTCTCTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCCATTTAAGCGCTCAGGGTGTAGCCCATTTGCAGTTCTCTCTTC  250

seq1  TGCCTGCATTCCCTCTGCAGAATTAGGGACTGAGCCAACTTCCCATGAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCATTCCCTCTGCAGAATTAGGGACTGAGCCAACTTCCCATGAAG  300

seq1  TCTCCATAGGTAGATGAGCAGGAGCCCTGCCTTTTTGAGCAGATATGCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATAGGTAGATGAGCAGGAGCCCTGCCTTTTTGAGCAGATATGCTT  350

seq1  GGGCAGCTTTGGAGTAGGACAGGTTTCATGCCTCCTCCTTTAGTTTTGCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCTTTGGAGTAGGACAGGTTTCATGCCTCCTCCTTTAGTTTTGCC  400

seq1  AGTCCCCACCTCCTAAATCAGATCTGAGTCTGGCTATTAAGACCCCCTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCACCTCCTAAATCAGATCTGAGTCTGGCTATTAAGACCCCCTTC  450

seq1  TGTCTTTTCTTTACTTTGGACCCAGTTCTAGATACTGCTGTTTAATTTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTCTTTACTTTGGACCCAGTTCTAGATACTGCTGTTTAATTTCA  500

seq1  ATCTCCTCCAAAGACAGAATGGGACTCTGTTTATGTGAAATCATGTTTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCCAAAGACAGAATGGGACTCTGTTTATGTGAAATCATGTTTGG  550

seq1  AGCTTGGCCACCCTACTAAAACACATGCCATTGTAATACTTTAGAGAGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGCCACCCTACTAAAACACATGCCATTGTAATACTTTAGAGAGTT  600

seq1  ATGTCCATATAGTAGACAAGAGAAGTCTGAGGTCATTCCCTTTTACACAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCATATAGTAGACAAGAGAAGTCTGAGGTCATTCCCTTTTACACAC  650

seq1  AGTGAGAATTCTTACTTTACTGCACACAGTAGGAATTC  687
      ||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAATTCTTACTTTACTGCACACAGTAGGAATTC  688

seq1: chr11_92831041_92831819
seq2: B6Ng01-071A04.g_68_846

seq1  GAATTCTTTATCATTTTGTTTTCCGTTTTGTTTTACTTGCAAAGGATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATCATTTTGTTTTCCGTTTTGTTTTACTTGCAAAGGATCCT  50

seq1  CAGTGCTGAGAGCATTAAGTACCAGGCTCTGAAAAATTAGCTAATGAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTGAGAGCATTAAGTACCAGGCTCTGAAAAATTAGCTAATGAATA  100

seq1  AACTTGTTAATATTTCAGCTATGCCCTTATCACCCAAATGCTTAATAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTTAATATTTCAGCTATGCCCTTATCACCCAAATGCTTAATAAGT  150

seq1  ACAAAGCACAATTCTGCTACTACAGGGAATTCAAAGTTAAGTCATAGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCACAATTCTGCTACTACAGGGAATTCAAAGTTAAGTCATAGTCC  200

seq1  ACACCCGAGGAGCATAGTGTCTGAACTGAAATGACAATGGCTGTTCTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCGAGGAGCATAGTGTCTGAACTGAAATGACAATGGCTGTTCTAAC  250

seq1  CTGTTCTACTTGTTCCAACCCAGTGGCAAAGCTGAGTGCCCATTGCCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTACTTGTTCCAACCCAGTGGCAAAGCTGAGTGCCCATTGCCTTA  300

seq1  AGAAAGACTTAAGCGATATATAAGACATCAAAAGTCTAATGCAGAATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACTTAAGCGATATATAAGACATCAAAAGTCTAATGCAGAATTTG  350

seq1  GTGATGAGAGAGAGCTCACATGGAATGAAGGACATTTTAATTGGACTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAGAGAGAGCTCACATGGAATGAAGGACATTTTAATTGGACTTGA  400

seq1  GGGAAAAATGCATAGACTTTAATATTCAATAACATTTTAGTTGTCACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAATGCATAGACTTTAATATTCAATAACATTTTAGTTGTCACCTC  450

seq1  ACAGAATCACTGAAAAAAAAAATAGTCATGATCTTTGCACCAGAGTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATCACTGAAAAAAAAAATAGTCATGATCTTTGCACCAGAGTTTCC  500

seq1  ATTCCAGAGAGAGACAGAGTGGCAAATACATAATTAACAGGTAAACTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGAGAGAGACAGAGTGGCAAATACATAATTAACAGGTAAACTGCT  550

seq1  GAGCACATATAAAGTAAGCATGAGCTGGTAACTGCTATAAAGGAAAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACATATAAAGTAAGCATGAGCTGGTAACTGCTATAAAGGAAAGTAA  600

seq1  AATAGATAAAGAGGAATGAAAAGAAAACGTGGTTTTTCTAGTCTAACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATAAAGAGGAATGAAAAGAAAACGTGGTTTTTCTAGTCTAACAGG  650

seq1  GAAGAAAATATATGGACTTGGTATAGCAACCACACTCCTGGGTAGTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATATATGGACTTGGTATAGCAACCACACTCCTGGGTAGTTCCC  700

seq1  AAGCCTAAGGGTAGTAGGCCAACACAGCACAAAGTGCATTCCATGTTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAAGGGTAGTAGGCCAACACAGCACAAAGTGCATTCCATGTTTGT  750

seq1  TTTGTGTGTGTGTGTGTGAGAGAGAGAGA  779
      |||||||||||||||||||||||||||||
seq2  TTTGTGTGTGTGTGTGTGAGAGAGAGAGA  779