BAC Information

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BAC

Clone NameB6Ng01-073C12
Chromosome11 (Build37)
Map Location 92,185,472 - 92,305,254
singlet/doubletdoublet
Overlap genenone
Upstream geneEG664976, Kif2b
Downstream geneLOC382545, LOC100039286, Car10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073C12.bB6Ng01-073C12.g
ACCDH890372DH890373
length1,1101,101
definitionDH890372|Mus musculus domesticus DNA, BAC clone: B6Ng01-073C12, 5' end.DH890373|Mus musculus domesticus DNA, BAC clone: B6Ng01-073C12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,185,472 - 92,186,587)(92,304,150 - 92,305,254)
sequence
gaattccatgtcaatgtttgaaataaagttcaggtaaatacataattcaa
aaaatgtactacataataatagaaagccaacattcatgtggaaactgaac
aacactcttctcaatgataccttggtcaagcaaggaataaagaaagaaat
taaagacattttagagtttaatgaaaatgaagctacaacatacccaaact
tatgggacacaatgagagcatttctaagaggaaaactcatagctctgagt
gcctccaaaaaaaactagagagagcacacactagcagcttgacaacacac
ctaaaactctagaacaaaaggaagcaaattcacccaagaggagtagaggg
caggaaataatcaaactcaggggcaaaatcaaccaaatataccatagatg
gcaatgcaatcctgttggaaaatgtaatgatacatattcttctgactacc
ttttgtcaattttcatttatctacttagatctttctgtgagacctgggat
ttggggaccttaaagaatgggtcagacttcaggctaatgcttcagtcaac
tttgcaggtttcagaaaatttatatacaggaatgtaccacaaatagcaat
gatccaaggacagatgtttgagttcagaaaaacataatcagaaaaacatc
taaataaatgccagcaacttcccaagaactttgtcagaacagaccatttt
aaacatgatggcctggcatgtactttaggttgtatctgggaaagcatgaa
agcaaggcagaaagccatacccagatttagggcagactaaggacatcatt
cagcacatcttatcgacagattgggttctatagttatgttcctacataca
gcaagaataagcatatcttagaaaccaaatgtaaatgtttgttgcaggag
gcataaaatccagaacaattccatggatcaaaaatacacttgaggtaaaa
gccctctgccattctccttgggagcctctctcacaagtcctcaaggcatg
ttcaccctgcttcattccttcaggtgcgtctcgaccattactcctctcct
gaggaagttcttcataaaagttgttggatgtctgaatgaacttacagatc
tggctctgta
gaattcagaaatcttgcccagggatgctgaaccaggaaaaggaccctact
ctactgtatttcacagtccatatttcttaaaccggaaaattgaggtctaa
ctaaaataaaacaggacacatttgcctgttctcactggctcatgaaaact
gtctgtttattaattttggatatagcaagtcaatttagcatttggtccta
ctctacctagcttttgtgtctgtatagattccatgtatactcaaccttca
ctaagagcaaaagttgtacaacccggcctgtagtagcacattcaggacta
gtttgagctagtattatttctacagctgggagtaatcagaaagatgctgg
ggaagggcagagatttttgccagttttccttcctgttgttggcatcagag
ttattccagacctggccatttgcaatcaataactattcactttgggctgg
gtcaacacagtggcgtcacaggtgaatctccctgggtgcttttcttttat
atacaaccttgcctactagggttggaattttcaagttggctctgccatga
ttgtgatggcaataagatatccctgtcttaagaatgacatgtgataaaac
atgtaattccagttttcatcaattatctccctgccttgtgcaaagagaca
tctcacagaattttgactgagacgccaaatagatagatagttgggcagca
ctggtggtttttagagtaagtattatctactcatgttggcaaaggcagga
actttatgacattttgaatccaaggaacttcatcaaaactcttgttgcat
aaagcaatgagccttcaacttacaataaaaagcgcataatgctttcaagg
tgtattattgcttattgaatatagataggccacatagtcaatgttctggg
tatagtcttctagatactactgtaatcactctaattcagagtttgggaca
cactaatgagaatgggttgtcaaagtagtttctcaaaccttgtataaaaa
agaacaattagaggtaatgtttataggataatttactatatggttgggga
ctacattgatatcaggtaggagcctatgtggtcaggttatttccaaatat
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92185472_92186587
seq2: B6Ng01-073C12.b_44_1153

seq1  GAATTCCATGTCAATGTTTGAAATAAAGTTCAGGTAAATACATAATTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTCAATGTTTGAAATAAAGTTCAGGTAAATACATAATTCAA  50

seq1  AAAATGTACTACATAATAATAGAAAGCCAACATTCATGTGGAAACTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTACTACATAATAATAGAAAGCCAACATTCATGTGGAAACTGAAC  100

seq1  AACACTCTTCTCAATGATACCTTGGTCAAGCAAGGAATAAAGAAAGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCTTCTCAATGATACCTTGGTCAAGCAAGGAATAAAGAAAGAAAT  150

seq1  TAAAGACATTTTAGAGTTTAATGAAAATGAAGCTACAACATACCCAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACATTTTAGAGTTTAATGAAAATGAAGCTACAACATACCCAAACT  200

seq1  TATGGGACACAATGAGAGCATTTCTAAGAGGAAAACTCATAGCTCTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGACACAATGAGAGCATTTCTAAGAGGAAAACTCATAGCTCTGAGT  250

seq1  GCCTCCAAAAAAAACTAGAGAGAGCACACACTAGCAGCTTGACAACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAAAAAAAACTAGAGAGAGCACACACTAGCAGCTTGACAACACAC  300

seq1  CTAAAACTCTAGAACAAAAGGAAGCAAATTCACCCAAGAGGAGTAGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACTCTAGAACAAAAGGAAGCAAATTCACCCAAGAGGAGTAGAGGG  350

seq1  CAGGAAATAATCAAACTCAGGGGCAAAATCAACCAAATATACCATAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATAATCAAACTCAGGGGCAAAATCAACCAAATATACCATAGATG  400

seq1  GCAATGCAATCCTGTTGGAAAATGTAATGATACATATTCTTCTGACTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGCAATCCTGTTGGAAAATGTAATGATACATATTCTTCTGACTACC  450

seq1  TTTTGTCAATTTTCATTTATCTACTTAGATCTTTCTGTGAGACCTGGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCAATTTTCATTTATCTACTTAGATCTTTCTGTGAGACCTGGGAT  500

seq1  TTGGGGACCTTAAAGAATGGGTCAGACTTCAGGCTAATGCTTCAGTCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGACCTTAAAGAATGGGTCAGACTTCAGGCTAATGCTTCAGTCAAC  550

seq1  TTTGCAGGTTTCAGAAAATTTATATACAGGAATGTACCACAAATAGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGGTTTCAGAAAATTTATATACAGGAATGTACCACAAATAGCAAT  600

seq1  GATCCAAGGACAGATGTTTGAGTTCAGAAAAACATAATCAGAAAAACATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAAGGACAGATGTTTGAGTTCAGAAAAACATAATCAGAAAAACATC  650

seq1  TAAATAAATGCCAGCAACTTCCCAAGAACTTTGTCAGAACAGACCATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATGCCAGCAACTTCCCAAGAACTTTGTCAGAACAGACCATTTT  700

seq1  AAACATGATGGCCTGGCATGTACTTTAGGTTGTATCTGGGAAAGCATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGATGGCCTGGCATGTACTTTAGGTTGTATCTGGGAAAGCATGAA  750

seq1  AGCAAGGCAGAAAGCCATACCCAGATTTAGGGCAGACTAAGGACATCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGCAGAAAGCCATACCCAGATTTAGGGCAGACTAAGGACATCATT  800

seq1  CAGCACATCTTATCGACAGATTGGGTTCTATAGTTATGTTCCTACATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACATCTTATCGACAGATTGGGTTCTATAGTTATGTTCCTACATACA  850

seq1  GCAAGAATAAGCATATCTTAGAAACCAAATGTAAATGTTTGTTGCAGGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAATAAGCATATCTTAGAAACCAAATGTAAATGTTTGTTGCAGGAG  900

seq1  GCATAAAATCCAAGAACAA-TCCATGGATCAAAAATACACTTGAGGTAAA  949
      ||||||||||| ||||||| ||||||||||||||||||||||||||||||
seq2  GCATAAAATCC-AGAACAATTCCATGGATCAAAAATACACTTGAGGTAAA  949

seq1  AGCCCTCTGCCATTCTCCTT-GGAGCCTCTCTCACAGTTCCTCAAGGCAT  998
      |||||||||||||||||||| |||||||||||||||  ||||||||||| 
seq2  AGCCCTCTGCCATTCTCCTTGGGAGCCTCTCTCACAAGTCCTCAAGGCA-  998

seq1  TGTTCACCCTGCTTCATTCCTTCGGGTGCGTCTCGACCATTACCTCCTCT  1048
      ||||||||||||||||||||||| |||||||||||||||||| |||||||
seq2  TGTTCACCCTGCTTCATTCCTTCAGGTGCGTCTCGACCATTA-CTCCTCT  1047

seq1  CCTGAGGAAGGTTCTTCATAAAAAGTTGTGTGATGTTCTGAATGATACTT  1098
      ||||||||| ||||||||| |||||||||  |||| ||||||||| || |
seq2  CCTGAGGAA-GTTCTTCAT-AAAAGTTGTTGGATG-TCTGAATGA-AC-T  1092

seq1  TACAGATCTGGCTCTGTA  1116
      ||||||||||||||||||
seq2  TACAGATCTGGCTCTGTA  1110

seq1: chr11_92304150_92305254
seq2: B6Ng01-073C12.g_69_1169 (reverse)

seq1  AATATTTTGGAAATAACCTGACCACATAGGCT-CTACCTGATTATCAATG  49
      |||| ||||||||||||||||||||||||||| |||||||| ||||||||
seq2  AATA-TTTGGAAATAACCTGACCACATAGGCTCCTACCTGA-TATCAATG  48

seq1  TAGTCCCCAACTATTAAGTAAAATATCCTATAAACATAGCCTTCTATTTG  99
      ||||||||||| ||  |||||| ||||||||||||||  || |||| |||
seq2  TAGTCCCCAACCATATAGTAAATTATCCTATAAACATTACC-TCTAATTG  97

seq1  TTCTTTTTTATACAAGGTTTTGGGAAACTACTTTGAC-ATCCATTCTCAT  148
      ||||||||||||||||| |||| |||||||||||||| | ||||||||| 
seq2  TTCTTTTTTATACAAGG-TTTGAGAAACTACTTTGACAACCCATTCTCA-  145

seq1  TTAGTGTGTTCCCAAACTCTGAATTAGAGTGATTACAGTAGTATCTAGAA  198
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTG-TCCCAAACTCTGAATTAGAGTGATTACAGTAGTATCTAGAA  194

seq1  GACTATACCCAG-ACATTGACTATGTGGCCTATCTATATTCATAAAGCAA  247
      |||||||||||| |||||||||||||||||||||||||||||  ||||||
seq2  GACTATACCCAGAACATTGACTATGTGGCCTATCTATATTCAATAAGCAA  244

seq1  TAAATACACCTTGAAAGCATTATGCGCTTTTTTATTGTAAGTTGAAGGCT  297
      | ||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  T-AATACACCTTGAAAGCATTATGCGC-TTTTTATTGTAAGTTGAAGGCT  292

seq1  CATTGCTTTATGCAACAAGAGTTTTGATGAAGTTCCTTGGATTC-AAATG  346
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CATTGCTTTATGCAACAAGAGTTTTGATGAAGTTCCTTGGATTCAAAATG  342

seq1  TCATAAAGTTCCTGCCTTTGCCAACATGAGTAGATAATACTTACTCTAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAGTTCCTGCCTTTGCCAACATGAGTAGATAATACTTACTCTAAA  392

seq1  AACCACCAGTGCTGCCCAACTATCTATCTATTTGGCGTCTCAGTCAAAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCAGTGCTGCCCAACTATCTATCTATTTGGCGTCTCAGTCAAAAT  442

seq1  TCTGTGAGATGTCTCTTTGCACAAGGCAGGGAGATAATTGATGAAAACTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGATGTCTCTTTGCACAAGGCAGGGAGATAATTGATGAAAACTG  492

seq1  GAATTACATGTTTTATCACATGTCATTCTTAAGACAGGGATATCTTATTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACATGTTTTATCACATGTCATTCTTAAGACAGGGATATCTTATTG  542

seq1  CCATCACAATCATGGCAGAGCCAACTTGAAAATTCCAACCCTAGTAGGCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACAATCATGGCAGAGCCAACTTGAAAATTCCAACCCTAGTAGGCA  592

seq1  AGGTTGTATATAAAAGAAAAGCACCCAGGGAGATTCACCTGTGACGCCAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTATATAAAAGAAAAGCACCCAGGGAGATTCACCTGTGACGCCAC  642

seq1  TGTGTTGACCCAGCCCAAAGTGAATAGTTATTGATTGCAAATGGCCAGGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGACCCAGCCCAAAGTGAATAGTTATTGATTGCAAATGGCCAGGT  692

seq1  CTGGAATAACTCTGATGCCAACAACAGGAAGGAAAACTGGCAAAAATCTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATAACTCTGATGCCAACAACAGGAAGGAAAACTGGCAAAAATCTC  742

seq1  TGCCCTTCCCCAGCATCTTTCTGATTACTCCCAGCTGTAGAAATAATACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTCCCCAGCATCTTTCTGATTACTCCCAGCTGTAGAAATAATACT  792

seq1  AGCTCAAACTAGTCCTGAATGTGCTACTACAGGCCGGGTTGTACAACTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAACTAGTCCTGAATGTGCTACTACAGGCCGGGTTGTACAACTTT  842

seq1  TGCTCTTAGTGAAGGTTGAGTATACATGGAATCTATACAGACACAAAAGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTAGTGAAGGTTGAGTATACATGGAATCTATACAGACACAAAAGC  892

seq1  TAGGTAGAGTAGGACCAAATGCTAAATTGACTTGCTATATCCAAAATTAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGAGTAGGACCAAATGCTAAATTGACTTGCTATATCCAAAATTAA  942

seq1  TAAACAGACAGTTTTCATGAGCCAGTGAGAACAGGCAAATGTGTCCTGTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGACAGTTTTCATGAGCCAGTGAGAACAGGCAAATGTGTCCTGTT  992

seq1  TTATTTTAGTTAGACCTCAATTTTCCGGTTTAAGAAATATGGACTGTGAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAGTTAGACCTCAATTTTCCGGTTTAAGAAATATGGACTGTGAA  1042

seq1  ATACAGTAGAGTAGGGTCCTTTTCCTGGTTCAGCATCCCTGGGCAAGATT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTAGAGTAGGGTCCTTTTCCTGGTTCAGCATCCCTGGGCAAGATT  1092

seq1  TCTGAATTC  1105
      |||||||||
seq2  TCTGAATTC  1101