BAC Information

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BAC

Clone NameB6Ng01-073G21
Chromosome11 (Build37)
Map Location 87,700,676 - 87,846,565
singlet/doubletdoublet
Overlap geneOlfr462, Olfr463, Olfr464, Dynll2
Upstream geneYpel2, Gdpd1, 1200011M11Rik, LOC668816, Prr11, 1110001A07Rik, Trim37, Ppm1e, Rad51c, Tex14, Sept4, Mtmr4, Hsf5, Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx
Downstream geneSfrs1, Vezf1, Cuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2, LOC100038945, Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073G21.bB6Ng01-073G21.g
ACCDH890564DH890565
length1,061690
definitionDH890564|Mus musculus domesticus DNA, BAC clone: B6Ng01-073G21, 5' end.DH890565|Mus musculus domesticus DNA, BAC clone: B6Ng01-073G21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,700,676 - 87,701,737)(87,845,876 - 87,846,565)
sequence
gaattcaatgctgggacttcctcaatcactcttcacattatttttttagg
acaagtctctcagcaaacctggaaaatagcaatttggctagactggccag
ccagcaaggctcagaggtctccccgtctctgcctctccatcattaggttt
atagatgcatgctgccataccaggcttttgtacaagggttatagggttga
actcgattctttgatagactgaaccttccctagcccatagatttacaaac
agcaacaacgacaaacccttaatttgaacttgtctgggatacagcttccc
ttgcaatgtaaaccataacctactctctttaacctgacacctttcacatt
tgtaatgaagaaaagagagaataggtgtagcagaggaaaacataccagtg
aataggaaaatgaatagcccttgctggctataaagactgaacttgcagca
actgatgaaggaaaagggagagaggaggaagatgagctagaaagagatca
aggaaccgagagtcaataaaatactacacagtatcttctacgaatcaaaa
tacggcaccaaaacccaaattcaaatgtatgaaagtgaatgatgggggaa
acgaattgttgactaagttaatgggcattctgatccaatttgcgaggaat
tgttgcttctgaaaataggggtggatcggggacagcagccaatagccaga
ctcctaccaaccccactgattacgggtttcacaccttgggtgtggtggac
agtcaccctcactgtccccactaacacacacacacatcacagaagatttc
tggccacttcagtgcacgattcaattgacagaagaaatatgtttttgtcg
agatgatgagcagtaactcttcccacattctgtgtcctccacagcatcct
ctagaacctgtttagatcttgacagatgtgtaacattgtcgagatcattg
gttaagccaattggtggaagcaagacctgaaagtgaggataggacatctc
gtggtccagcaattggacgtgaagatcaaagcttctattactggaatagg
aagtgcgaacc
gaattccagaacagccagggctacacagagaaactctagcttgaaaagaa
aaacagaaagacctaaaacgttcttttcagtcaagttctgaaagcctggg
tgcatccctgcatggtaccctgggagaggggagggagttgttcctgtttc
ctgggagcatccccaggggatggtgtgagaaggtggcaggtaacaagggc
tcctcttctcaaagtgcagactgaaacattgctggagacttccagaagga
agagctgagctatgagctggtttgaaaacttgggccgtgcagaacctgag
actatcctttagtccttcctgagcctgtttcccagatgagatctggggga
gggcttcctgaaaggtaggcgaccagagtccggtgctgatagctgcattt
ggtttagtctgtcttttcagactgcagtcactctgaagtcaagaactcct
gttgtttttcagctctcagtgtgagcacgggttctcggataggattgtgt
tgctgttggcatgtgtccgtgtgtccatttggaacgtctgtgggtgtgga
ttgggcatttttatcttctcacatgccctcctccatcatctagactgaaa
tgagagctgccaagtgctaccccatcctcaccatcctcctccaaagggac
gagccaaaagtcctttaaccctgtatgtggttattcaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_87700676_87701737
seq2: B6Ng01-073G21.b_43_1103

seq1  GAATTCAATGCTGGGACTTCCTCAATCACTCTTCACATTATTTTTTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCTGGGACTTCCTCAATCACTCTTCACATTATTTTTTTAGG  50

seq1  ACAAGTCTCTCAGCAAACCTGGAAAATAGCAATTTGGCTAGACTGGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCTCTCAGCAAACCTGGAAAATAGCAATTTGGCTAGACTGGCCAG  100

seq1  CCAGCAAGGCTCAGAGGTCTCCCCGTCTCTGCCTCTCCATCATTAGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAGGCTCAGAGGTCTCCCCGTCTCTGCCTCTCCATCATTAGGTTT  150

seq1  ATAGATGCATGCTGCCATACCAGGCTTTTGTACAAGGGTTATAGGGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGCATGCTGCCATACCAGGCTTTTGTACAAGGGTTATAGGGTTGA  200

seq1  ACTCGATTCTTTGATAGACTGAACCTTCCCTAGCCCATAGATTTACAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGATTCTTTGATAGACTGAACCTTCCCTAGCCCATAGATTTACAAAC  250

seq1  AGCAACAACGACAAACCCTTAATTTGAACTTGTCTGGGATACAGCTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAACGACAAACCCTTAATTTGAACTTGTCTGGGATACAGCTTCCC  300

seq1  TTGCAATGTAAACCATAACCTACTCTCTTTAACCTGACACCTTTCACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATGTAAACCATAACCTACTCTCTTTAACCTGACACCTTTCACATT  350

seq1  TGTAATGAAGAAAAGAGAGAATAGGTGTAGCAGAGGAAAACATACCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGAAGAAAAGAGAGAATAGGTGTAGCAGAGGAAAACATACCAGTG  400

seq1  AATAGGAAAATGAATAGCCCTTGCTGGCTATAAAGACTGAACTTGCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAAATGAATAGCCCTTGCTGGCTATAAAGACTGAACTTGCAGCA  450

seq1  ACTGATGAAGGAAAAGGGAGAGAGGAGGAAGATGAGCTAGAAAGAGATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGAAGGAAAAGGGAGAGAGGAGGAAGATGAGCTAGAAAGAGATCA  500

seq1  AGGAACCGAGAGTCAATAAAATACTACACAGTATCTTCTACGAATCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCGAGAGTCAATAAAATACTACACAGTATCTTCTACGAATCAAAA  550

seq1  TACGGCACCAAAACCCAAATTCAAATGTATGAAAGTGAATGATGGGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGCACCAAAACCCAAATTCAAATGTATGAAAGTGAATGATGGGGGAA  600

seq1  ACGAATTGTTGACTAAGTTAATGGGCATTCTGATCCAATTTGCGAGGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATTGTTGACTAAGTTAATGGGCATTCTGATCCAATTTGCGAGGAAT  650

seq1  TGTTGCTTCTGAAAATAGGGGTGGATCGGGGACAGCAGCCAATAGCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTCTGAAAATAGGGGTGGATCGGGGACAGCAGCCAATAGCCAGA  700

seq1  CTCCTACCAACCCCACTGATTACGGGTTTCACACCTTGGGTGTGGTGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACCAACCCCACTGATTACGGGTTTCACACCTTGGGTGTGGTGGAC  750

seq1  AGTCACCCTCACTGTCCCCACTAACACACACACACATCACAGAAGATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCCTCACTGTCCCCACTAACACACACACACATCACAGAAGATTTC  800

seq1  TGGCCACTTCAGTGCACGATTCAATTGACAGAAGAAATATGTTTGTGTCG  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGGCCACTTCAGTGCACGATTCAATTGACAGAAGAAATATGTTTTTGTCG  850

seq1  AGAATGATGAGCAGTAACTCTTCCCACATTCTGTGTCCTCCACAGCATCC  900
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-ATGATGAGCAGTAACTCTTCCCACATTCTGTGTCCTCCACAGCATCC  899

seq1  TCTAGCACCCTGTTTAGATCTTGACAGATGTGTAACATTGTCGAGATCAT  950
      ||||| | ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAG-AACCTGTTTAGATCTTGACAGATGTGTAACATTGTCGAGATCAT  948

seq1  TGGTTTAAGCCAGTTTGGTGAAGCCAAGACCTGAGAGTTGAGG-TAGGAC  999
      ||| ||||||||  |||||| |  |||||||||| || ||||| ||||||
seq2  TGG-TTAAGCCA-ATTGGTGGAAGCAAGACCTGAAAG-TGAGGATAGGAC  995

seq1  ATC-CGTGGT-CAGCAATTTGACGTGAAAGATCAGAGCTCCTA-TACAGG  1046
      ||| |||||| |||||||| |||||| ||||||| |||| ||| ||| ||
seq2  ATCTCGTGGTCCAGCAATTGGACGTG-AAGATCAAAGCTTCTATTACTGG  1044

seq1  AATAGG-AGTGCAAACC  1062
      |||||| ||||| ||||
seq2  AATAGGAAGTGCGAACC  1061

seq1: chr11_87845876_87846565
seq2: B6Ng01-073G21.g_69_758 (reverse)

seq1  ACCTGAATAACCACATACAGGGTTAAAGGACTTTTGGCTCGTCCTTTCTG  50
      |||||||||||||||||||||||||||||||||||||||||||| || ||
seq2  ACCTGAATAACCACATACAGGGTTAAAGGACTTTTGGCTCGTCCCTT-TG  49

seq1  GAGGAGGATGGTGAGGCTGGGGTAGCAC-TGGCAGCTCTCATTTCAGTCT  99
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  GAGGAGGATGGTGAGGATGGGGTAGCACTTGGCAGCTCTCATTTCAGTCT  99

seq1  AGGCTGATGGAGGAGGGCATGTGAG-AGATAAAGATGCCCAATCCACACC  148
      | | ||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  A-GATGATGGAGGAGGGCATGTGAGAAGATAAAAATGCCCAATCCACACC  148

seq1  CACAGACGTTCCAAATGGACACACGGACACATGCCAACAGCAACACAATC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACGTTCCAAATGGACACACGGACACATGCCAACAGCAACACAATC  198

seq1  CTATCCGAGAACCCGTGCTCACACTGAGAGCTGAAAAACAACAGGAGTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCGAGAACCCGTGCTCACACTGAGAGCTGAAAAACAACAGGAGTTC  248

seq1  TTGACTTCAGAGTGACTGCAGTCTGAAAAGACAGACTAAACCAAATGCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTCAGAGTGACTGCAGTCTGAAAAGACAGACTAAACCAAATGCAG  298

seq1  CTATCAGCACCGGACTCTGGTCGCCTACCTTTCAGGAAGCCCTCCCCCAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGCACCGGACTCTGGTCGCCTACCTTTCAGGAAGCCCTCCCCCAG  348

seq1  ATCTCATCTGGGAAACAGGCTCAGGAAGGACTAAAGGATAGTCTCAGGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATCTGGGAAACAGGCTCAGGAAGGACTAAAGGATAGTCTCAGGTT  398

seq1  CTGCACGGCCCAAGTTTTCAAACCAGCTCATAGCTCAGCTCTTCCTTCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACGGCCCAAGTTTTCAAACCAGCTCATAGCTCAGCTCTTCCTTCTG  448

seq1  GAAGTCTCCAGCAATGTTTCAGTCTGCACTTTGAGAAGAGGAGCCCTTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTCCAGCAATGTTTCAGTCTGCACTTTGAGAAGAGGAGCCCTTGT  498

seq1  TACCTGCCACCTTCTCACACCATCCCCTGGGGATGCTCCCAGGAAACAGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCCACCTTCTCACACCATCCCCTGGGGATGCTCCCAGGAAACAGG  548

seq1  AACAACTCCCTCCCCTCTCCCAGGGTACCATGCAGGGATGCACCCAGGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTCCCTCCCCTCTCCCAGGGTACCATGCAGGGATGCACCCAGGCT  598

seq1  TTCAGAACTTGACTGAAAAGAACGTTTTAGGTCTTTCTGTTTTTCTTTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAACTTGACTGAAAAGAACGTTTTAGGTCTTTCTGTTTTTCTTTTC  648

seq1  AAGCTAGAGTTTCTCTGTGTAGCCCTGGCTGTTCTGGAATTC  690
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGAGTTTCTCTGTGTAGCCCTGGCTGTTCTGGAATTC  690