BAC Information

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BAC

Clone NameB6Ng01-073J07
Chromosome11 (Build37)
Map Location 23,455,184 - 23,602,876
singlet/doubletdoublet
Overlap geneA730027B03Rik, 0610010F05Rik, Pex13, 4933435A13Rik
Upstream geneLOC100042827, LOC100042846, LOC666078, B3gnt2, 9130230N09Rik, Commd1, Zrsr1, Cct4, 4930430E16Rik, LOC100042875, Xpo1, LOC100042202, Ahsa2, 1700093K21Rik
Downstream geneRel, Papolg, A830031A19Rik, LOC100042256, Bcl11a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073J07.bB6Ng01-073J07.g
ACCDH890664DH890665
length1,130242
definitionDH890664|Mus musculus domesticus DNA, BAC clone: B6Ng01-073J07, 5' end.DH890665|Mus musculus domesticus DNA, BAC clone: B6Ng01-073J07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,601,739 - 23,602,876)(23,455,184 - 23,455,425)
sequence
gaattcattaaaaacttcattgatcacgtaaagagaaaagtatatgcaat
tgttttaaaagaacgagtacctactatgtgtcaggcactgttgtatacag
tagataaaaaattaaataaacccaacaaaaattcctcacttcataggcct
gtactttagagacagcaaagaactggcatttttagtggcacgtgagccta
attttgaagattcaatgaaaaaaaaaagcacactaatatattttcctgag
ttggaattccaagatttatacattctggaaaggtcaaataaagttaatgt
ttacagcttggaatcacaaaactaatgcaatgttatatccatgctacgaa
catttgtatctcctcccttgctaacaatggggcttatttatgggtatcaa
agtaaaagctgcagtctccccaaagcccccactgcctaggaagaaacatt
ctatcttcaagtatcaacattctgaaatgttcacctgtgtaatatgagtt
aaataatgatctcacatttccctaaaatctattcatgacccaatacatct
ggataaatgcccattatgagggctagctttagtatgcaacctacaattgt
taataaaaaggatctgaggaagtaaaacagagtatagcattactaaaact
gatctactacctcaagttattattactcaactaacaagcctatatcattc
aagtaaagaaaataccaaacaccatgatggccagtcacaggacttcttgt
gacaacagatagggcagagtccaatcatgagtaatctcttttatttgttt
ttgttgtcgttattgtttggagacaggatttctctatgtagccctggctg
tcctggaactcagtacaccacgctgaccttgaactcagagctctgcctgg
ttctgccgcccaagtgctgggactaaaggtgagtgctagcacacttggcc
ctgagtcatccatcttactgtctgatcttcactgatggagttattaccta
aaaaataccccttacatagcagaccagcagaaactactaactgcagccag
aaatagtcagtcagtagtagttacatgaattgatcttgggaaagattgtg
tgggtactagaatcaaaccaagatcctctg
ttagctccttctttagcaccatgtctacctgaacgctgccatgcttccct
ccacaataatggattaaagctctgaaactgtaagcaagctccaattaagt
ggtttctttcattagagttgctgtgatcatagtctcttttcacagcaata
gaacactgactaaaataactgtttaaataggactaatggacattattcgt
gtgtgtgtgtgtgtgagagagagagagagagggagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_23601739_23602876
seq2: B6Ng01-073J07.b_43_1172 (reverse)

seq1  CAGAGGATCCTAGTTTGATTCCTAGTACCCACACAATCTCTCCC-AGATC  49
      ||||||||| | |||||||| |||||||||||||||||| |||| |||||
seq2  CAGAGGATCTTGGTTTGATT-CTAGTACCCACACAATCTTTCCCAAGATC  49

seq1  AATTCATTGTAACTACTACCTGACTGACTATTTCTGGCCTGCAGTTAGTA  99
      |||||| ||||||||||| |||||||||||||||||| ||||||||||||
seq2  AATTCA-TGTAACTACTA-CTGACTGACTATTTCTGG-CTGCAGTTAGTA  96

seq1  GTTTCTGCTGGTCTTGCTAATTGTAAGGGGTATTGTTTTAGGTAATAACT  149
      ||||||||||||| |||||  ||||||||||||| |||||||||||||||
seq2  GTTTCTGCTGGTC-TGCTA--TGTAAGGGGTATT-TTTTAGGTAATAACT  142

seq1  CCATCAGTGAAGATCAGACAGTAAGATGGATGACTCAGGGCCAAGTGTGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGTGAAGATCAGACAGTAAGATGGATGACTCAGGGCCAAGTGTGC  192

seq1  TAGCACTCACCTTTAGTCCCAGCACTTGGGCGGCAGAACCAGGCAGAGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTCACCTTTAGTCCCAGCACTTGGGCGGCAGAACCAGGCAGAGCT  242

seq1  CTGAGTTCAAGGTCAGCGTGGTGTACCTGAGTTCCAGGACAGCCAGGGCT  299
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGAGTTCAAGGTCAGCGTGGTGTA-CTGAGTTCCAGGACAGCCAGGGCT  291

seq1  ACATAGAGAAATCCTGTCTCCAAACAATAACGACAACAAAAACAAATAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGAAATCCTGTCTCCAAACAATAACGACAACAAAAACAAATAAA  341

seq1  AGAGATTACTCATGATTGGACTCTGCCCTATCTGTTGTCACAAGAAGTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTACTCATGATTGGACTCTGCCCTATCTGTTGTCACAAGAAGTCC  391

seq1  TGTGACTGGCCATCATGGTGTTTGGTATTTTCTTTACTTGAATGATATAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTGGCCATCATGGTGTTTGGTATTTTCTTTACTTGAATGATATAG  441

seq1  GCTTGTTAGTTGAGTAATAATAACTTGAGGTAGTAGATCAGTTTTAGTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTAGTTGAGTAATAATAACTTGAGGTAGTAGATCAGTTTTAGTAA  491

seq1  TGCTATACTCTGTTTTACTTCCTCAGATCCTTTTTATTAACAATTGTAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATACTCTGTTTTACTTCCTCAGATCCTTTTTATTAACAATTGTAGG  541

seq1  TTGCATACTAAAGCTAGCCCTCATAATGGGCATTTATCCAGATGTATTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATACTAAAGCTAGCCCTCATAATGGGCATTTATCCAGATGTATTGG  591

seq1  GTCATGAATAGATTTTAGGGAAATGTGAGATCATTATTTAACTCATATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAATAGATTTTAGGGAAATGTGAGATCATTATTTAACTCATATTA  641

seq1  CACAGGTGAACATTTCAGAATGTTGATACTTGAAGATAGAATGTTTCTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTGAACATTTCAGAATGTTGATACTTGAAGATAGAATGTTTCTTC  691

seq1  CTAGGCAGTGGGGGCTTTGGGGAGACTGCAGCTTTTACTTTGATACCCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAGTGGGGGCTTTGGGGAGACTGCAGCTTTTACTTTGATACCCAT  741

seq1  AAATAAGCCCCATTGTTAGCAAGGGAGGAGATACAAATGTTCGTAGCATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCCCCATTGTTAGCAAGGGAGGAGATACAAATGTTCGTAGCATG  791

seq1  GATATAACATTGCATTAGTTTTGTGATTCCAAGCTGTAAACATTAACTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAACATTGCATTAGTTTTGTGATTCCAAGCTGTAAACATTAACTTT  841

seq1  ATTTGACCTTTCCAGAATGTATAAATCTTGGAATTCCAACTCAGGAAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACCTTTCCAGAATGTATAAATCTTGGAATTCCAACTCAGGAAAAT  891

seq1  ATATTAGTGTGCTTTTTTTTTTCATTGAATCTTCAAAATTAGGCTCACGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGTGTGCTTTTTTTTTTCATTGAATCTTCAAAATTAGGCTCACGT  941

seq1  GCCACTAAAAATGCCAGTTCTTTGCTGTCTCTAAAGTACAGGCCTATGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTAAAAATGCCAGTTCTTTGCTGTCTCTAAAGTACAGGCCTATGAA  991

seq1  GTGAGGAATTTTTGTTGGGTTTATTTAATTTTTTATCTACTGTATACAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAATTTTTGTTGGGTTTATTTAATTTTTTATCTACTGTATACAAC  1041

seq1  AGTGCCTGACACATAGTAGGTACTCGTTCTTTTAAAACAATTGCATATAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTGACACATAGTAGGTACTCGTTCTTTTAAAACAATTGCATATAC  1091

seq1  TTTTCTCTTTACGTGATCAATGAAGTTTTTAATGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTTTACGTGATCAATGAAGTTTTTAATGAATTC  1130

seq1: chr11_23455184_23455425
seq2: B6Ng01-073J07.g_74_315

seq1  TTAGCTCCTTCTTTAGCACCATGTCTACCTGAACGCTGCCATGCTTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCCTTCTTTAGCACCATGTCTACCTGAACGCTGCCATGCTTCCCT  50

seq1  CCACAATAATGGATTAAAGCTCTGAAACTGTAAGCAAGCTCCAATTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATAATGGATTAAAGCTCTGAAACTGTAAGCAAGCTCCAATTAAGT  100

seq1  GGTTTCTTTCATTAGAGTTGCTGTGATCATAGTCTCTTTTCACAGCAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTTTCATTAGAGTTGCTGTGATCATAGTCTCTTTTCACAGCAATA  150

seq1  GAACACTGACTAAAATAACTGTTTAAATAGGACTAATGGACATTATTCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGACTAAAATAACTGTTTAAATAGGACTAATGGACATTATTCGT  200

seq1  GTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGGGAGAGAGAGA  242
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGGGAGAGAGAGA  242