BAC Information

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BAC

Clone NameB6Ng01-073K15
Chromosome11 (Build37)
Map Location 24,674,940 - 24,801,679
singlet/doubletdoublet
Overlap genenone
Upstream genePapolg, A830031A19Rik, LOC100042256, Bcl11a
Downstream geneLOC100042282, 5730522E02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073K15.bB6Ng01-073K15.g
ACCDH890722DH890723
length1,002375
definitionDH890722|Mus musculus domesticus DNA, BAC clone: B6Ng01-073K15, 5' end.DH890723|Mus musculus domesticus DNA, BAC clone: B6Ng01-073K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,674,940 - 24,675,946)(24,801,291 - 24,801,679)
sequence
gaattctcaagagcctctttgttcttgatgaagtctttctgggtctcaga
tcagaagattccgatcttcatctcttgttgactatgtcttccatgagctt
tagtctgctctagctttgatgatgttcttctcctgcattcaaataagtcc
cttgaaggcatctgactcgtctgattagatgatcagaaagggtgacagag
taggagctgttgaggcttgcctttttacctgtactctcacaggctgaccc
ctgatacctttttgtgacatcatgtattatatctagtttgatgtcaggga
taaagcagggacacatgaaaaattctatttaattttttcggagcaagttt
gcaggaaaatacaggaagtaaattatttgagaattcatcaccttcataaa
aatagaaaaatgaactgagagaaagataaaaaggcaaatcctcctccttc
agctttctttgaaaacaaaacaacaacaaattgttttctttattatttat
ttataaagtgagagtgtgttgaaagccttcaccctgtggcactgagtagg
tcatcagaacactttgccatgtggtactgagtaagtcatcagaaatcaga
aataaatacatcaaatgctaccaccaatttttacagtaatcctgcctaag
gacagaacagcatccagaagattccggcattgcttagtataacttgaaaa
ttctcctaggacctagcaatgacctgtgagggataatgttttaaaaggaa
tgggactcacttggctactcatctgctcatgtattgctctgtcttcatag
atataataaataagagattggttacttgcctgggagcaatcatgggtccg
aagttggatgtttctagaaacttagagtaattatttatttacaaagattg
tgcttacttaaaagcacaagctgtgtctaagccctcagcaacattctgac
ctgtgtagcccagaaatattgacatacatggactgttggaacctgcttgg
gc
aagtttagcttgggtaataaaggatattcggaaggaaggaaggaaggaag
gaaggaaggaaaggaggggccgagggagggagagagggagggagagagaa
acagagggagggagggagagaggaaaggagggatgtttcttttttgctgc
agtttttgacaactaagactttgtctttcctaagatggggttcacattac
ttttctccttgtatttgttggttgtaatttagatttctcatgggcactgt
tcaataaaacactctctgatatgagtttcttgtctttcctctgacctcat
gacttgggaggaggcgattccccaattccccatctccctggctcccataa
agaattgtactcctcagccctgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_24674940_24675946
seq2: B6Ng01-073K15.b_44_1045

seq1  GAATTCTCAAGAGCCTCTTTGTTCTTGATGAAGTCTTTCTGGGTCTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAGAGCCTCTTTGTTCTTGATGAAGTCTTTCTGGGTCTCAGA  50

seq1  TCAGAAGATTCCGATCTTCATCTCTTGTTGACTATGTCTTCCATGAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGATTCCGATCTTCATCTCTTGTTGACTATGTCTTCCATGAGCTT  100

seq1  TAGTCTGCTCTAGCTTTGATGATGTTCTTCTCCTGCATTCAAATAAGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGCTCTAGCTTTGATGATGTTCTTCTCCTGCATTCAAATAAGTCC  150

seq1  CTTGAAGGCATCTGACTCGTCTGATTAGATGATCAGAAAGGGTGACAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGGCATCTGACTCGTCTGATTAGATGATCAGAAAGGGTGACAGAG  200

seq1  TAGGAGCTGTTGAGGCTTGCCTTTTTACCTGTACTCTCACAGGCTGACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCTGTTGAGGCTTGCCTTTTTACCTGTACTCTCACAGGCTGACCC  250

seq1  CTGATACCTTTTTGTGACATCATGTATTATATCTAGTTTGATGTCAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACCTTTTTGTGACATCATGTATTATATCTAGTTTGATGTCAGGGA  300

seq1  TAAAGCAGGGACACATGAAAAATTCTATTTAATTTTTTCGGAGCAAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAGGGACACATGAAAAATTCTATTTAATTTTTTCGGAGCAAGTTT  350

seq1  GCAGGAAAATACAGGAAGTAAATTATTTGAGAATTCATCACCTTCATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAAATACAGGAAGTAAATTATTTGAGAATTCATCACCTTCATAAA  400

seq1  AATAGAAAAATGAACTGAGAGAAAGATAAAAAGGCAAATCCTCCTCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAAAATGAACTGAGAGAAAGATAAAAAGGCAAATCCTCCTCCTTC  450

seq1  AGCTTTCTTTGAAAACAAAACAACAACAAATTGTTTTCTTTATTATTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCTTTGAAAACAAAACAACAACAAATTGTTTTCTTTATTATTTAT  500

seq1  TTATAAAGTGAGAGTGTGTTGAAAGCCTTCACCCTGTGGCACTGAGTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAGTGAGAGTGTGTTGAAAGCCTTCACCCTGTGGCACTGAGTAGG  550

seq1  TCATCAGAACACTTTGCCATGTGGTACTGAGTAAGTCATCAGAAATCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGAACACTTTGCCATGTGGTACTGAGTAAGTCATCAGAAATCAGA  600

seq1  AATAAATACATCAAATGCTACCACCAATTTTTACAGTAATCCTGCCTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATACATCAAATGCTACCACCAATTTTTACAGTAATCCTGCCTAAG  650

seq1  GACAGAACAGCATCCAGAAGATTCCGGCATTGCTTAGTATAACTTGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAACAGCATCCAGAAGATTCCGGCATTGCTTAGTATAACTTGAAAA  700

seq1  TTCTCCTAGGACCTAGCAATGACCTGTGAGGGATAATGTTTTAAAAGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTAGGACCTAGCAATGACCTGTGAGGGATAATGTTTTAAAAGGAA  750

seq1  TGGGACTCACTTGGCTACTCATCTGCTCATGTATTGCTCTGTCTTCATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCACTTGGCTACTCATCTGCTCATGTATTGCTCTGTCTTCATAG  800

seq1  ATATAATAAATAAGAGATTGGTTACTTGCCTGGGAGCAATCATGGGTCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAAATAAGAGATTGGTTACTTGCCTGGGAGCAATCATGGGTCCG  850

seq1  AAGTTGGATGTTTCTAGAAACTTAGAGTAATTATTTATTTACAAAAGATT  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGTTGGATGTTTCTAGAAACTTAGAGTAATTATTTATTTAC-AAAGATT  899

seq1  GTGCTTACTTAAAAGCACAAGCTGTGTCTAAAGCCCTCAGCAACAATCTG  950
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  GTGCTTACTTAAAAGCACAAGCTGTGTCT-AAGCCCTCAGCAACATTCTG  948

seq1  ACCTGTGGTAGCCACAGAAATAATTGACATACATGGACTGTTGGAGCCTG  1000
      |||||| |||||| ||||||| ||||||||||||||||||||||| ||||
seq2  ACCTGT-GTAGCC-CAGAAAT-ATTGACATACATGGACTGTTGGAACCTG  995

seq1  CTTGGGC  1007
      |||||||
seq2  CTTGGGC  1002

seq1: chr11_24801291_24801679
seq2: B6Ng01-073K15.g_69_449 (reverse)

seq1  AGGCAAGGCTGACTGAGTACTAGTTCTTTATGGAGAGCCAGGGTTGATGA  50
      ||||| ||||||  |||||| | |||||||||| |||||||||  |||| 
seq2  AGGCAGGGCTGA-GGAGTAC-AATTCTTTATGG-GAGCCAGGG-AGATGG  46

seq1  GGGGTTGGGGAATCGCCTCCTCCCAAGTCATTGAGGTCTGAGGGCTAGAC  100
      ||  |||||||||||||||||||||||||| ||||||| || ||  ||||
seq2  GGAATTGGGGAATCGCCTCCTCCCAAGTCA-TGAGGTCAGA-GGAAAGAC  94

seq1  AAGATTCTCCTTTCAGAGTTTGTCTTTTATGACAGTGCCCTTGAGAATTC  150
      ||||  ||| | ||||||  ||| || |   ||||||||| |||||| ||
seq2  AAGAAACTCATATCAGAGAGTGTTTTATTGAACAGTGCCCATGAGAAATC  144

seq1  TAAATAACAACCAACAAATACAAGGTGAAAAGTAATGCTGAACCCCATCT  200
      ||||| ||||||||||||||||||| ||||||||||| ||||||||||||
seq2  TAAATTACAACCAACAAATACAAGGAGAAAAGTAATG-TGAACCCCATCT  193

seq1  TTGGAAAGACAAAGTCTTAGTTGTCAAACTACTGCAGCCTTAGTGAAACA  250
      | ||||||||||||||||||||||||||  ||||||||   |  ||||||
seq2  TAGGAAAGACAAAGTCTTAGTTGTCAAA-AACTGCAGCAAAAAAGAAACA  242

seq1  TCCCTCCTTTCCTCTCTCCCTCCCTCCCTCTGTTTCTCTCTCCCTCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTTTCCTCTCTCCCTCCCTCCCTCTGTTTCTCTCTCCCTCCCTC  292

seq1  TCTCCCTCCCTCGGCCCCTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCCCTCGGCCCCTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCC  342

seq1  TTCCGAATATCCTTTATTACCCAAGCTAGACTTGAATTC  389
      |||||||||||||||||||||||||||| ||||||||||
seq2  TTCCGAATATCCTTTATTACCCAAGCTAAACTTGAATTC  381