BAC Information

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BAC

Clone NameB6Ng01-073L19
Chromosome11 (Build37)
Map Location 56,575,090 - 56,696,739
singlet/doubletdoublet
Overlap genenone
Upstream geneNmur2, LOC100040816, LOC624168
Downstream geneGria1, LOC667878, 1810073G14Rik, Mfap3, Galnt10, Sap30l, Hand1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073L19.bB6Ng01-073L19.g
ACCDH890776DH890777
length1,045782
definitionDH890776|Mus musculus domesticus DNA, BAC clone: B6Ng01-073L19, 5' end.DH890777|Mus musculus domesticus DNA, BAC clone: B6Ng01-073L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,575,090 - 56,576,126)(56,695,958 - 56,696,739)
sequence
ttgggagttgggacaggtagatcccaggagagtcactgtccaggtggtat
agaggggatggtaatttagtgagagaccctgttttaaaaaataagatgaa
atattaatgaaaacatatagtcttaacctctgatactcagacattcttac
acatacccaggcaacatacccaggcacacatgtgcacacatgcacacaac
aaagaaataccaaagtattctaaaatgtaaatctcccccaaaggttcaag
tgatcacatgtaaaagaaaagccaacaaacaagcaaatagaaaaaaatta
gtattaatatcatcacagcgtgaaatcagatcatgctactgagctctaag
agtcaaaacagcacagcttgaagatcgccagcttcccagcccagaaaaga
ttggcatctgacaggggatgcttttttgaccctgctttgattgccacctg
cagcttacccatattgcataaccggcaggtacacagtagtctacatgtct
caatagaaaaaaaaagtagaagatttaaaagaaggaagagacaagttaag
agtgtgtgtcttatgtttgggcatgctgctgattgaaactttgtaacatt
tgaggggggagcacttggggggggagacttttttttctgatgctgatgct
acagggtgctgcatgatactgctcatttcatagccgaggaagcattacta
acttgctcaggataaacagcgagaggccaaggcagaatttcaaattagat
ttattctgagtgtgactgactctaaagtacaagtgctttttttttttttt
tttagataacgatgactatgttgatattttatccagtgctcaccataaag
cagtcaaggtttctaagtgctctggaatgggctgataccttgtgtacttc
ttgagtcactcttacaaggttgcttatgaggaattgcaaggaggctcagc
catttctctatttttctgaataactataggaggagaatgtcctccgagca
ttaagaacagaagctaggaggagtgccttttagccactggatagg
gaattctgttttcaaattcctcttttcttatttctcttttatcttgcctg
tgaaaaaggaagtaggattcataacaaccctgtatcagctatagcccgag
gctggttatagacataagaattttccccaaattgaaggaaaacctcctat
gaggagtagctgactacataaaatgtataataaagaatattgggctggtg
agatggtacagtaggggaaggcactttccaccacaactggcaacttgagt
ttgatccccaaaaccctcaggatgaaaccagagaactaactttcataggt
tgtcctctgatcttcgcatgaatgtcatagtatgtatgcatgcatgcttg
caccggcgcacgcgcgtgcacacacacacacacacacacacatacacaca
cacatatggctgccaaattgaagtcaggcaaatcaatgcccagagtgaag
gagggagggtagcaagtgtattagcccatcaacatggagtttcgttactc
agcagctaagagtgcacccttccagctagagaaagtacccaaggagctga
agaggtttgcagccccataggaggtacagcaatatgaactaaccagtaac
cccagagctccttgggactaaagcaccaatcaaagaaaacacatggtggg
acttgtggttctagctgcacatggcctagttggtcatcaatgagaggaga
gttcctaggtcctgtgaaggttctctgtcccagtatagtggaatgccagg
gccaggaatgggagtgggtgggttggggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_56575090_56576126
seq2: B6Ng01-073L19.b_58_1102

seq1  TTGGGAGTTGGGACAGGTAGATCCCAGGAGAGTCACTGTCCAGGTGGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGTTGGGACAGGTAGATCCCAGGAGAGTCACTGTCCAGGTGGTAT  50

seq1  AGAGGGGATGGTAATTTAGTGAGAGACCCTGTTTTAAAAAATAAGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGATGGTAATTTAGTGAGAGACCCTGTTTTAAAAAATAAGATGAA  100

seq1  ATATTAATGAAAACATATAGTCTTAACCTCTGATACTCAGACATTCTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATGAAAACATATAGTCTTAACCTCTGATACTCAGACATTCTTAC  150

seq1  ACATACCCAGGCAACATACCCAGGCACACATGTGCACACATGCACACAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCCAGGCAACATACCCAGGCACACATGTGCACACATGCACACAAC  200

seq1  AAAGAAATACCAAAGTATTCTAAAATGTAAATCTCCCCCAAAGGTTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATACCAAAGTATTCTAAAATGTAAATCTCCCCCAAAGGTTCAAG  250

seq1  TGATCACATGTAAAAGAAAAGCCAACAAACAAGCAAATAGAAAAAAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACATGTAAAAGAAAAGCCAACAAACAAGCAAATAGAAAAAAATTA  300

seq1  GTATTAATATCATCACAGCGTGAAATCAGATCATGCTACTGAGCTCTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAATATCATCACAGCGTGAAATCAGATCATGCTACTGAGCTCTAAG  350

seq1  AGTCAAAACAGCACAGCTTGAAGATCGCCAGCTTCCCAGCCCAGAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAACAGCACAGCTTGAAGATCGCCAGCTTCCCAGCCCAGAAAAGA  400

seq1  TTGGCATCTGACAGGGGATGCTTTTTTGACCCTGCTTTGATTGCCACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATCTGACAGGGGATGCTTTTTTGACCCTGCTTTGATTGCCACCTG  450

seq1  CAGCTTACCCATATTGCATAACCGGCAGGTACACAGTAGTCTACATGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTACCCATATTGCATAACCGGCAGGTACACAGTAGTCTACATGTCT  500

seq1  CAATAGAAAAAAAAAGTAGAAGATTTAAAAGAAGGAAGAGACAAGTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGAAAAAAAAAGTAGAAGATTTAAAAGAAGGAAGAGACAAGTTAAG  550

seq1  AGTGTGTGTCTTATGTTTGGGCATGCTGCTGATTGAAACTTTGTAACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTGTCTTATGTTTGGGCATGCTGCTGATTGAAACTTTGTAACATT  600

seq1  TGAGGGGGGAGCACTTGGGGGGGGAGACTTTTTTTTCTGATGCTGATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGGGAGCACTTGGGGGGGGAGACTTTTTTTTCTGATGCTGATGCT  650

seq1  ACAGGGTGCTGCATGATACTGCTCATTTCATAGCCGAGGAAGCATTACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTGCTGCATGATACTGCTCATTTCATAGCCGAGGAAGCATTACTA  700

seq1  ACTTGCTCAGGATAAACAGCGAGAGGCCAAGGCAGAA-TTCAAATTAGAT  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTTGCTCAGGATAAACAGCGAGAGGCCAAGGCAGAATTTCAAATTAGAT  750

seq1  TTATTCTGAGTGTGACTGACTCTAAAGTACAAGTGC-TTTTTTTTTTTTT  798
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTATTCTGAGTGTGACTGACTCTAAAGTACAAGTGCTTTTTTTTTTTTTT  800

seq1  TTAAGATAACGATGACTATGTTGATA-TTTATCCAGTGCTCACCATAAAG  847
      || ||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTAGATAACGATGACTATGTTGATATTTTATCCAGTGCTCACCATAAAG  850

seq1  CAGTCAAGG-TTCTAAGTGCTCTGGAAT-GGCTGATACCTTGTGTACTTC  895
      ||||||||| |||||||||||||||||| |||||||||||||||||||||
seq2  CAGTCAAGGTTTCTAAGTGCTCTGGAATGGGCTGATACCTTGTGTACTTC  900

seq1  CTGAGTCACTCTTACAAGG-TGCTTATGAGGAAATGCAAGGAGGCTCAGC  944
       |||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  TTGAGTCACTCTTACAAGGTTGCTTATGAGGAATTGCAAGGAGGCTCAGC  950

seq1  CATTTCTCTA-TTTTCTGAATAACTATAGGA-GAGAATGT-CTCCGAGCA  991
      |||||||||| |||||||||||||||||||| |||||||| |||||||||
seq2  CATTTCTCTATTTTTCTGAATAACTATAGGAGGAGAATGTCCTCCGAGCA  1000

seq1  TAAAGAAACCAGAAGCTAGGAGGAGTGCCTTTAAG-CACTGGATAGG  1037
      | |||||  ||||||||||||||||||||||| || |||||||||||
seq2  TTAAGAA--CAGAAGCTAGGAGGAGTGCCTTTTAGCCACTGGATAGG  1045

seq1: chr11_56695958_56696739
seq2: B6Ng01-073L19.g_70_851 (reverse)

seq1  TGCTCCCCAACCCACCCACTCCCATTCCTGGCCCTGGCATTCCACTATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCAACCCACCCACTCCCATTCCTGGCCCTGGCATTCCACTATAC  50

seq1  TGGGACAGAGAACCTTCACAGGACCTAGGAACTCTCCTCTCATTGATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAGAGAACCTTCACAGGACCTAGGAACTCTCCTCTCATTGATGAC  100

seq1  CAACTAGGCCATGTGCAGCTAGAACCACAAGTCCCACCATGTGTTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGGCCATGTGCAGCTAGAACCACAAGTCCCACCATGTGTTTTCTT  150

seq1  TGATTGGTGCTTTAGTCCCAAGGAGCTCTGGGGTTACTGGTTAGTTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGTGCTTTAGTCCCAAGGAGCTCTGGGGTTACTGGTTAGTTCATA  200

seq1  TTGCTGTACCTCCTATGGGGCTGCAAACCTCTTCAGCTCCTTGGGTACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTACCTCCTATGGGGCTGCAAACCTCTTCAGCTCCTTGGGTACTT  250

seq1  TCTCTAGCTGGAAGGGTGCACTCTTAGCTGCTGAGTAACGAAACTCCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCTGGAAGGGTGCACTCTTAGCTGCTGAGTAACGAAACTCCATG  300

seq1  TTGATGGGCTAATACACTTGCTACCCTCCCTCCTTCACTCTGGGCATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGGCTAATACACTTGCTACCCTCCCTCCTTCACTCTGGGCATTGA  350

seq1  TTTGCCTGACTTCAATTTGGCAGCCATATGTGTGTGTGTATGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTGACTTCAATTTGGCAGCCATATGTGTGTGTGTATGTGTGTGTG  400

seq1  TGTGTGTGTGTGTGCACGCGCGTGCGCCGGTGCAAGCATGCATGCATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGCACGCGCGTGCGCCGGTGCAAGCATGCATGCATACA  450

seq1  TACTATGACATTCATGCGAAGATCAGAGGACAACCTATGAAAGTTAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGACATTCATGCGAAGATCAGAGGACAACCTATGAAAGTTAGTTC  500

seq1  TCTGGTTTCATCCTGAGGGTTTTGGGGATCAAACTCAAGTTGCCAGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTCATCCTGAGGGTTTTGGGGATCAAACTCAAGTTGCCAGTTGT  550

seq1  GGTGGAAAGTGCCTTCCCCTACTGTACCATCTCACCAGCCCAATATTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAAAGTGCCTTCCCCTACTGTACCATCTCACCAGCCCAATATTCTT  600

seq1  TATTATACATTTTATGTAGTCAGCTACTCCTCATAGGAGGTTTTCCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATACATTTTATGTAGTCAGCTACTCCTCATAGGAGGTTTTCCTTCA  650

seq1  ATTTGGGGAAAATTCTTATGTCTATAACCAGCCTCGGGCTATAGCTGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGGAAAATTCTTATGTCTATAACCAGCCTCGGGCTATAGCTGATA  700

seq1  CAGGGTTGTTATGAATCCTACTTCCTTTTTCACAGGCAAGATAAAAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTGTTATGAATCCTACTTCCTTTTTCACAGGCAAGATAAAAGAGA  750

seq1  AATAAGAAAAGAGGAATTTGAAAACAGAATTC  782
      ||||||||||||||||||||||||||||||||
seq2  AATAAGAAAAGAGGAATTTGAAAACAGAATTC  782