BAC Information

Click to search

BAC

Clone NameB6Ng01-074B10
Chromosome11 (Build37)
Map Location 87,881,173 - 88,023,602
singlet/doubletdoublet
Overlap geneVezf1, Cuedc1, Mrps23
Upstream geneGdpd1, 1200011M11Rik, LOC668816, Prr11, 1110001A07Rik, Trim37, Ppm1e, Rad51c, Tex14, Sept4, Mtmr4, Hsf5, Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1
Downstream gene1700106J16Rik, LOC668793, Msi2, LOC100038945, Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074B10.bB6Ng01-074B10.g
ACCDH891033DH891034
length507557
definitionDH891033|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B10, 5' end.DH891034|Mus musculus domesticus DNA, BAC clone: B6Ng01-074B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,881,173 - 87,881,685)(88,023,040 - 88,023,602)
sequence
cctgctcaaattggaagaccacgcaaagggcgatggcaagagcgctgagt
gagggcttagctggtcaggaataaaaatacccgagggtaggggacactag
aagctagcatcctagttcgtaggtggaagctgtgatgtgcttgaccgatt
gaacagccaggtgaccaaccgaagccctgactgccgctgggggtatgaga
gggacgcgacgccgccgggtaccaaggcagagtcacgagaggcagcccag
ctgtgcccagcgggccagcgccagaccctggcgtcctccatcttctctcc
tgcgctccccctgctccagctgcctgagccacggaccgcagcatcacaca
cccccgcggggggggacgccgcaccccatccccgcccccggccccacccc
agcccccgcgcgggctccctgaccccaccgcccgcgggcactggctgagc
tccgaggcggcgcgccggcggcggggacgcccggagggggtcgaagcggc
tgggggc
caagcagcccatactaggcctgtgttggggctacagagacatctgctacc
cagcaccaagcagggcccagagagagctgcctagaggtgcacccctccta
gaaacaacagctgaaccttcggggaggggggggctatatttacttgggcc
tgggaaatgcttaccgctgacaggtagacttgaagtttgggttgaagaga
tcaaaagctttctgaccagatccataggttgcaaagaatttcctagaaaa
tatagaaacaatatgaatctccaatcataggctatggagagtgaggcaga
gggaatacaggataactgctaggccctgagaagttacagagcctaagcca
aaggacaatgcatacatcaagtggagagggatctcagggaggcctaacac
tcccttacccttctgccccaccaacttccctgtccttccttgtccccgtt
tcagaaaacaacactaaccagattcacatgtcaccacactcagaaatacc
ccaccaacaaataacactacagatgtatcactctgtgtgtgtgtgtgtgt
gtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_87881173_87881685
seq2: B6Ng01-074B10.b_44_556

seq1  GAATTCCCTGCTCAAATTGGAAGACCACGCAAAGGGCGATGGCAAGAGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGCTCAAATTGGAAGACCACGCAAAGGGCGATGGCAAGAGCG  50

seq1  CTGAGTGAGGGCTTAGCTGGTCAGGAATAAAAATACCCGAGGGTAGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGAGGGCTTAGCTGGTCAGGAATAAAAATACCCGAGGGTAGGGGA  100

seq1  CACTAGAAGCTAGCATCCTAGTTCGTAGGTGGAAGCTGTGATGTGCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGAAGCTAGCATCCTAGTTCGTAGGTGGAAGCTGTGATGTGCTTGA  150

seq1  CCGATTGAACAGCCAGGTGACCAACCGAAGCCCTGACTGCCGCTGGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATTGAACAGCCAGGTGACCAACCGAAGCCCTGACTGCCGCTGGGGGT  200

seq1  ATGAGAGGGACGCGACGCCGCCGGGTACCAAGGCAGAGTCACGAGAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGGACGCGACGCCGCCGGGTACCAAGGCAGAGTCACGAGAGGCA  250

seq1  GCCCAGCTGTGCCCAGCGGGCCAGCGCCAGACCCTGGCGTCCTCCATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCTGTGCCCAGCGGGCCAGCGCCAGACCCTGGCGTCCTCCATCTT  300

seq1  CTCTCCTGCGCTCCCCCTGCTCCAGCTGCCTGAGCCACGGACCGCAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTGCGCTCCCCCTGCTCCAGCTGCCTGAGCCACGGACCGCAGCAT  350

seq1  CACACACCCCCGCGGGGGGGGACGCCGCACCCCATCCCCGCCCCCGGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCCCCGCGGGGGGGGACGCCGCACCCCATCCCCGCCCCCGGCCC  400

seq1  CACCCCAGCCCCCGCGCGGGCTCCCTGACCCCACCGCCCGCGGGCACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAGCCCCCGCGCGGGCTCCCTGACCCCACCGCCCGCGGGCACTGG  450

seq1  CTGAGCTCCGAGGCGGCGCGCCGGCGGCGGGGACGCCCGGAGGGGGTCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTCCGAGGCGGCGCGCCGGCGGCGGGGACGCCCGGAGGGGGTCGA  500

seq1  AGCGGCTGGGGGC  513
      |||||||||||||
seq2  AGCGGCTGGGGGC  513

seq1: chr11_88023040_88023602
seq2: B6Ng01-074B10.g_67_629 (reverse)

seq1  CACACACACACACACACACACACAGAGTGATACATCTGTAGTGTTATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACAGAGTGATACATCTGTAGTGTTATTTG  50

seq1  TTGGTGGGGTATTTCTGAGTGTGGTGACATGTGAATCTGGTTAGTGTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGGGTATTTCTGAGTGTGGTGACATGTGAATCTGGTTAGTGTTGT  100

seq1  TTTCTGAAACGGGGACAAGGAAGGACAGGGAAGTTGGTGGGGCAGAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAAACGGGGACAAGGAAGGACAGGGAAGTTGGTGGGGCAGAAGGG  150

seq1  TAAGGGAGTGTTAGGCCTCCCTGAGATCCCTCTCCACTTGATGTATGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAGTGTTAGGCCTCCCTGAGATCCCTCTCCACTTGATGTATGCAT  200

seq1  TGTCCTTTGGCTTAGGCTCTGTAACTTCTCAGGGCCTAGCAGTTATCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTGGCTTAGGCTCTGTAACTTCTCAGGGCCTAGCAGTTATCCTG  250

seq1  TATTCCCTCTGCCTCACTCTCCATAGCCTATGATTGGAGATTCATATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCTCTGCCTCACTCTCCATAGCCTATGATTGGAGATTCATATTGT  300

seq1  TTCTATATTTTCTAGGAAATTCTTTGCAACCTATGGATCTGGTCAGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATTTTCTAGGAAATTCTTTGCAACCTATGGATCTGGTCAGAAAG  350

seq1  CTTTTGATCTCTTCAACCCAAACTTCAAGTCTACCTGTCAGCGGTAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATCTCTTCAACCCAAACTTCAAGTCTACCTGTCAGCGGTAAGCA  400

seq1  TTTCCCAGGCCCAAGTAAATATAGCCCCCCCCTCCCCGAAGGTTCAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAGGCCCAAGTAAATATAGCCCCCCCCTCCCCGAAGGTTCAGCTG  450

seq1  TTGTTTCTAGGAGGGGTGCACCTCTAGGCAGCTCTCTCTGGGCCCTGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTAGGAGGGGTGCACCTCTAGGCAGCTCTCTCTGGGCCCTGCTT  500

seq1  GGTGCTGGGTAGCAGATGTCTCTGTAGCCCCAACACAGGCCTAGTATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGGTAGCAGATGTCTCTGTAGCCCCAACACAGGCCTAGTATGGG  550

seq1  CTGCTTGGAATTC  563
      |||||||||||||
seq2  CTGCTTGGAATTC  563