BAC Information

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BAC

Clone NameB6Ng01-074H06
Chromosome11 (Build37)
Map Location 23,957,513 - 23,958,548
singlet/doubletsinglet
Overlap geneA830031A19Rik
Upstream geneLOC100042875, Xpo1, LOC100042202, Ahsa2, 1700093K21Rik, A730027B03Rik, 0610010F05Rik, Pex13, 4933435A13Rik, Rel, Papolg
Downstream geneLOC100042256, Bcl11a, LOC100042282
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074H06.bB6Ng01-074H06.g
ACCDH891299DH891300
length1,032617
definitionDH891299|Mus musculus domesticus DNA, BAC clone: B6Ng01-074H06, 5' end.DH891300|Mus musculus domesticus DNA, BAC clone: B6Ng01-074H06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattactccactagtagaactggggaattatctacgattcaccat
gttgctggctttcaaacaatgaagatggtaagtcaggagctatcagtgca
aggcttcctaacaggagagccagtagacatgtaatgtgcagcttcataaa
tactgtctcaggctgtgcatggcatgaaacaactgcaccctgtcgcaaaa
tggtgttgctggggatcaaactcagagtctaaatgcatgctagtcaaggt
ccctaccactgagctacatctccaaccccaggagcaggtgaaccatagtc
ctaagaataaaggaatccatttacattaagcaaaaaacaggatccttcct
ctttgtttctttctttctgactggctgagctgggggtggggcagggaaat
gcctttgtttgattgattgattgttagttgtagggagacacacactggca
cagtgaaccaaaaaccaacacttgatggttgtagctacatcagtcacact
gtgcccgggggaggaagagtggcctgaagtgatgttgtcatgcctaccat
atttcatgaccagcttcagttaaggtaaaatttagggtgtgaacccccag
atctttggaagaatgcctacatggttcatgtccactgaagatcagaaccc
aggggaggaatgcatgtgtattgggctacaaaatgagtcagacttgtttt
agaaaacacccaaatccaggggcactgttgggaaataatgtgcagggttt
ggctgagttggacaatgtgagacagactctcaaggaagggagagatgccc
cagaagtgtgtagcagcagagatgctttcagatagaccccagatatcagc
cttcactgtctggctgagctacaggcaaaaggaaacacctccgtgtttca
gagaatggttggtaggtgacaagctctttagaaaatgaaacctggggcat
ataaagtttgtagacctagggctctcttcccaatgatggctgactagcca
tcttctgaagtgggagtggggtgggtagggga
gaattctagaaagtctttaatttctctctctctctctctctctctctctc
tctctctctctctttcttcctttctttcttccctgacccagtgatcattg
agtagtgagttgttcagtttctaagagtttgtagattttttgttgtttca
gtctagctttaatccatggaggtctgataagatacaaggagttattttaa
ttttcttatatctgttgagactttatttgtgaccgagtatgtggtcaatt
ttggagaaggttctgtgagatgctgaaaataagatatattcttttgtgtt
tggtctgtagatatctgttatgttcatttgatctataacctttgttagtt
tcatttttttctctgtttctgtctcaatgatctgtttgttggtgagagtg
gggtgttgacaactcccactattaatgtgttaggttcaatatatgggtta
agttttagtaatgtttgttttatgaatgttggtgcccttgcatttggggc
atatgtgttcagaattgaggtgtcttcttggtgaatttttcctttgatga
gtaagaaatgtccttccccatctcttttgattaattttggctgaaagtct
attttactagatattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_23957513_23958548
seq2: B6Ng01-074H06.b_47_1078 (reverse)

seq1  TCCCCTACCCA-CCCACTCCCACTTCAGAAGATGGCCTAGTCAGCCATCA  49
      ||||||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  TCCCCTACCCACCCCACTCCCACTTCAGAAGATGG-CTAGTCAGCCATCA  49

seq1  TTGGGAAGAGAGGCCCCTAGGTCTTACAAACTTTATATGCCCCAGGTTTC  99
      ||||||||||||  ||||||||| ||||||||||||||||||||||||||
seq2  TTGGGAAGAGAG--CCCTAGGTC-TACAAACTTTATATGCCCCAGGTTTC  96

seq1  ATTTTTCTAAAGAGCTTGTCACCTACCAACCATTCTCTGAAACACGGAGG  149
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTTTCTAAAGAGCTTGTCACCTACCAACCATTCTCTGAAACACGGAGG  145

seq1  TGTTTCCTTTTGCCTGTAGCTCAGCCAGACAGTGAAGGCTGATATCTGGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTTTTGCCTGTAGCTCAGCCAGACAGTGAAGGCTGATATCTGGG  195

seq1  GTCTATCTGAAAGCATCTCTGCTGCTACACACTTCTGGGGCATCTCTCCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCTGAAAGCATCTCTGCTGCTACACACTTCTGGGGCATCTCTCCC  245

seq1  TTCCTTGAGAGTCTGTCTCACATTGTCCAACTCAGCCAAACCCTGCACAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGAGAGTCTGTCTCACATTGTCCAACTCAGCCAAACCCTGCACAT  295

seq1  TATTTCCCAACAGTGCCCCTGGATTTGGGTGTTTTCTAAAACAAGTCTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCCAACAGTGCCCCTGGATTTGGGTGTTTTCTAAAACAAGTCTGA  345

seq1  CTCATTTTGTAGCCCAATACACATGCATTCCTCCCCTGGGTTCTGATCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTGTAGCCCAATACACATGCATTCCTCCCCTGGGTTCTGATCTT  395

seq1  CAGTGGACATGAACCATGTAGGCATTCTTCCAAAGATCTGGGGGTTCACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGACATGAACCATGTAGGCATTCTTCCAAAGATCTGGGGGTTCACA  445

seq1  CCCTAAATTTTACCTTAACTGAAGCTGGTCATGAAATATGGTAGGCATGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAATTTTACCTTAACTGAAGCTGGTCATGAAATATGGTAGGCATGA  495

seq1  CAACATCACTTCAGGCCACTCTTCCTCCCCCGGGCACAGTGTGACTGATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCACTTCAGGCCACTCTTCCTCCCCCGGGCACAGTGTGACTGATG  545

seq1  TAGCTACAACCATCAAGTGTTGGTTTTTGGTTCACTGTGCCAGTGTGTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACAACCATCAAGTGTTGGTTTTTGGTTCACTGTGCCAGTGTGTGT  595

seq1  CTCCCTACAACTAACAATCAATCAATCAAACAAAGGCATTTCCCTGCCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTACAACTAACAATCAATCAATCAAACAAAGGCATTTCCCTGCCCC  645

seq1  ACCCCCAGCTCAGCCAGTCAGAAAGAAAGAAACAAAGAGGAAGGATCCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAGCTCAGCCAGTCAGAAAGAAAGAAACAAAGAGGAAGGATCCTG  695

seq1  TTTTTTGCTTAATGTAAATGGATTCCTTTATTCTTAGGACTATGGTTCAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGCTTAATGTAAATGGATTCCTTTATTCTTAGGACTATGGTTCAC  745

seq1  CTGCTCCTGGGGTTGGAGATGTAGCTCAGTGGTAGGGACCTTGACTAGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTGGGGTTGGAGATGTAGCTCAGTGGTAGGGACCTTGACTAGCA  795

seq1  TGCATTTAGACTCTGAGTTTGATCCCCAGCAACACCATTTTGCGACAGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTAGACTCTGAGTTTGATCCCCAGCAACACCATTTTGCGACAGGG  845

seq1  TGCAGTTGTTTCATGCCATGCACAGCCTGAGACAGTATTTATGAAGCTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTGTTTCATGCCATGCACAGCCTGAGACAGTATTTATGAAGCTGC  895

seq1  ACATTACATGTCTACTGGCTCTCCTGTTAGGAAGCCTTGCACTGATAGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACATGTCTACTGGCTCTCCTGTTAGGAAGCCTTGCACTGATAGCT  945

seq1  CCTGACTTACCATCTTCATTGTTTGAAAGCCAGCAACATGGTGAATCGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTACCATCTTCATTGTTTGAAAGCCAGCAACATGGTGAATCGTA  995

seq1  GATAATTCCCCAGTTCTACTAGTGGAGTAATGAATTC  1036
      |||||||||||||||||||||||||||||||||||||
seq2  GATAATTCCCCAGTTCTACTAGTGGAGTAATGAATTC  1032