BAC Information

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BAC

Clone NameB6Ng01-075H16
Chromosome11 (Build37)
Map Location 39,987,941 - 39,988,156
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039241, LOC382508, LOC432549, Mat2b, Hmmr, Nudcd2, Ccng1, LOC100039256
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075H16.bB6Ng01-075H16.g
ACCDH892029DH892030
length99874
definitionDH892029|Mus musculus domesticus DNA, BAC clone: B6Ng01-075H16, 5' end.DH892030|Mus musculus domesticus DNA, BAC clone: B6Ng01-075H16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatctcaacagcattatctcaagaggtttcctcctcaggtcgatc
cgcaagcctctggcccatcagagcaggggtggggtggggtggggtgggg
gaattcatgatcagttgtaattcctgtttggtctaagtcctttcgggaaa
tgagttggatttaaatcatggggggcgggggtttggggagactgagggta
gtcgacagaaagtctacttcgggatcaagactagaatgttccccttcctc
atagaacagcaagagagctgcatcgttgagagaaggagcacatgagcttc
cgtgccttccaagcatgtactcgtaggagcaagaaaattaggcctgggac
aagttcatgctcacagagagcatccgttcaacgttgggcctgacttcctg
gatcttgtgatctaagcctgtggccataagtgctcggtgtgcacctcgaa
gagacacacggctaggaataaacagcaaatcgctctattacgagtgtcag
aatagagggtaggcgattgcccagattacctgaacaacaagacttcaaaa
cgaaacaaaacaaaacgaaacgaaacgaaacgaaacgaaaggtgcacaac
agatgatgatcggtctcccgctaaatacaaagtgtcaccagtcaagcaca
gaaaaaacacttgctaacctaggctccattgccttaaactttgttcatca
gttaagacaagagttaagtccatctagtggagagaaagaaggatgggaaa
agtttcttaggcgtgaatgtcaaaacaaaattatgttatcaaggctcctg
gtgtagtttccttttgtgggatgattttaatctggtttttggaagaatat
gtttctggggtgatggcttttagagaatatgtgacctgtggctaccaggt
aatctcttacacacagagagtgctgtcttgggtggtataaaaaggctgag
agaaaacaaacaaacaacaacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_39987941_39988156
seq2: B6Ng01-075H16.g_906_942 (reverse)

seq1  TTTGTTGTTGTTTGTTTGTTTTCAGAGAAGGTAATAGGACTGGGATGTTA  50
                                                        
seq2  --------------------------------------------------  0

seq1  TGAAAAGAAAGCATGCTATGGACCCGAGCTCCTTTTCTTTTAGAATGTGC  100
                                                        
seq2  --------------------------------------------------  0

seq1  AGCTCTTATCATACAGATCTTTCACTTCCTTAGTTAGAGTCACGCCAAGG  150
                                                        
seq2  --------------------------------------------------  0

seq1  TATTTTATATTATTTGTGACTATTGAGAAGGGTGTTGTTTCCCTAATTTC  200
                  |||||               ||||||||   |  ||||
seq2  ------------TTTGT---------------TGTTGTTTGTTTGTTTTC  23

seq1  TTTCTCAGCCTGTTTA  216
        ||||||||| ||||
seq2  --TCTCAGCCTTTTTA  37