BAC Information

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BAC

Clone NameB6Ng01-076G01
Chromosome11 (Build37)
Map Location 30,746,049 - 30,746,920
singlet/doubletsinglet
Overlap genePsme4
Upstream geneC230094A16Rik, Spnb2, EG666427, LOC666432, 4930505A04Rik, Acyp2, LOC654445, LOC666452, LOC666470, LOC631243
Downstream geneGpr75, LOC100042469, 4933407N01Rik, Asb3, Chac2, Stc2, 2310022M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076G01.bB6Ng01-076G01.g
ACCDH892660DH892661
length8711,102
definitionDH892660|Mus musculus domesticus DNA, BAC clone: B6Ng01-076G01, 5' end.DH892661|Mus musculus domesticus DNA, BAC clone: B6Ng01-076G01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacatcccactgagtactgctctaaacagtactgctggctgctt
gtgttagttctggatgatacaaggctcttgagcaaacataatgaccaatt
taggtttccactgtgtataagtcatggcttcttgggaaataggtgttatt
tttttaaggtttatttttattgtttttaaattatgtgtatctgtgtatag
gtgtctgcacctggttgtaggtggggggcaagaggtattagtattggttc
ccctttgcactgggtaatgggaacaaactcaggccttcaggaagaacagt
gccattcttaccactgagcagatatctagattttaaagacaaatatttta
gttaagttgggtatggtagagagtgagtgtaacttctgcactcaaggctt
ttaagggaggactggtattaattcaagaccagtctggactgtagaacaag
actgtccataatcaactaaacaaaaggaaggaaagaaaaaaaacaaaacc
acaaaaatgaaacaaaaatttcttcatcgaatatacttcattatcattgt
gaaagttaattcactttaaaaagccaagttggattgggactctataaata
aagacccaagagtcagcagctaatctggacccttgggggctcccagaggc
taaatcaccaaccaaaaaagcatacattggctagacctgcaaatatgtag
cagatgtgcagctcagtcttcctgcagtcccccaacaactggagcagggg
ctgtctctctgttgcctacctgtgaatcctgttcccctaaaaatgtgcct
agtcctgcagtgacttgatgttccagggtggggtggtacccagtaagggt
gggggccttggaggagggagg
gaattccataacaatagataaagcattctgtgagtccacagatggtggtt
ttggcagaagcattacatgcaggaaaggtaaatccataaccagaataagt
atctactccagtaagaacaaatgtcctttccatggaggaagtggtccact
gtagtcaaactgccaccgggtgggttcatgtgcccattgagcaatgacag
ggatgcttggggaaagaggctgactgtccacagaacgggtcatcttatcc
acttgattattgaactcttcctcagctggtcatcttttggtgagcattta
catgaaacacaaatattgtcacatcctttgccaacttggagagatctatc
cacatacttctgtgccagatgtctttctcaccaattttccaaccatgatc
tttcaaagtccctgaccatccatccaatccactggctatagcccatgagt
cagtgaacaatcatacatctggccattgcttcttccaaacaaactgtaat
accatgtgtaatgccagaagttcttcccactttgaagattttccttcacc
tgtatatttcagtgttgtctcagaaaggggttgtaatgctgcagctgtcc
acttctagatggtgcctgcataatgtgcagaatcatcagtaaaccaggtc
ccagtcttcgattcttcagtcagccgatcatagggaacaccccatgaggc
tataggtgcatgcttggcagcagatggcattgtaacaggagttgaaacca
taggcatttgagcaatttcttcatgtaacttgcttgtgccttcaggacct
gctctggcccaatcacatagatatcactttaatttgataatagactgctg
ctgtacacatcctactttatgacttggagggtctgatacaaccatctcat
gatgggcaggcagtcagattgcatggtaactattgccaaatgttcagttt
ccactaaggcaagagtgtttttcaaagagattatctggcgatgatgaaag
aagcttggtcccaaatcccaaaggtctcttcttgttattcacctacagag
aggcttgcctgaggtccaaacaaagacccaatctgcccctgagattctct
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_30746049_30746920
seq2: B6Ng01-076G01.b_44_914

seq1  GAATTCAACATCCCACTGAGTACTGCTCTAAACAGTACTGCTGGCTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATCCCACTGAGTACTGCTCTAAACAGTACTGCTGGCTGCTT  50

seq1  GTGTTAGTTCTGGATGATACAAGGCTCTTGAGCAAACATAATGACCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGTTCTGGATGATACAAGGCTCTTGAGCAAACATAATGACCAATT  100

seq1  TAGGTTTCCACTGTGTATAAGTCATGGCTTCTTGGGAAATAGGTGTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTCCACTGTGTATAAGTCATGGCTTCTTGGGAAATAGGTGTTATT  150

seq1  TTTTTAAGGTTTATTTTTATTGTTTTTAAATTATGTGTATCTGTGTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGGTTTATTTTTATTGTTTTTAAATTATGTGTATCTGTGTATAG  200

seq1  GTGTCTGCACCTGGTTGTAGGTGGGGGGCAAGAGGTATTAGTATTGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGCACCTGGTTGTAGGTGGGGGGCAAGAGGTATTAGTATTGGTTC  250

seq1  CCCTTTGCACTGGGTAATGGGAACAAACTCAGGCCTTCAGGAAGAACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGCACTGGGTAATGGGAACAAACTCAGGCCTTCAGGAAGAACAGT  300

seq1  GCCATTCTTACCACTGAGCAGATATCTAGATTTTAAAGACAAATATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCTTACCACTGAGCAGATATCTAGATTTTAAAGACAAATATTTTA  350

seq1  GTTAAGTTGGGTATGGTAGAGAGTGAGTGTAACTTCTGCACTCAAGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTTGGGTATGGTAGAGAGTGAGTGTAACTTCTGCACTCAAGGCTT  400

seq1  TTAAGGGAGGACTGGTATTAATTCAAGACCAGTCTGGACTGTAGAACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGAGGACTGGTATTAATTCAAGACCAGTCTGGACTGTAGAACAAG  450

seq1  ACTGTCCATAATCAACTAAACAAAAGGAAGGAAAGAAAAAAAACAAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCATAATCAACTAAACAAAAGGAAGGAAAGAAAAAAAACAAAACC  500

seq1  ACAAAAATGAAACAAAAATTTCTTCATCGAATATACTTCATTATCATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATGAAACAAAAATTTCTTCATCGAATATACTTCATTATCATTGT  550

seq1  GAAAGTTAATTCACTTTAAAAAGCCAAGTTGGATTGGGACTCTATAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTAATTCACTTTAAAAAGCCAAGTTGGATTGGGACTCTATAAATA  600

seq1  AAGACCCAAGAGTCAGCAGCTAATCTGGACCCTTGGGGGCTCCCAGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCAAGAGTCAGCAGCTAATCTGGACCCTTGGGGGCTCCCAGAGGC  650

seq1  TAAATCACCAACC-AAAAAGCATACATTGGCTAGACCTGCAAATATGTAG  699
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAAATCACCAACCAAAAAAGCATACATTGGCTAGACCTGCAAATATGTAG  700

seq1  CAGATGTGCAGCTCAGTCTTCCTGCAGGTCCCCCAACAACTGGAGCAGGG  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGATGTGCAGCTCAGTCTTCCTGCA-GTCCCCCAACAACTGGAGCAGGG  749

seq1  GCTGTCTCTCTGTTGCCTACCTGTGAATCCTGTTCCCCTAAAAATGTGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTCTCTGTTGCCTACCTGTGAATCCTGTTCCCCTAAAAATGTGCC  799

seq1  TAGTCCTGCAGTGACTTGATGTTCCAGGGTGGGTTGGTACCCAGGAAGGG  849
      ||||||||||||||||||||||||||||||||| |||||||||| || ||
seq2  TAGTCCTGCAGTGACTTGATGTTCCAGGGTGGGGTGGTACCCAGTAA-GG  848

seq1  GTGGGGGCCTTGGAGGAGGGAGG  872
      |||||||||||||||||||||||
seq2  GTGGGGGCCTTGGAGGAGGGAGG  871