BAC Information

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BAC

Clone NameB6Ng01-077E22
Chromosome11 (Build37)
Map Location 44,096,054 - 44,292,534
singlet/doubletdoublet
Overlap geneIl12b, Ublcp1
Upstream geneEG544767, Pttg1, Slu7, LOC100039392, C1qtnf2, Ccnjl, Fabp6, LOC620562, 4631424J17Rik, Ttc1, Adra1b
Downstream gene3732413I11Rik, Ebf1, LOC382510
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077E22.bB6Ng01-077E22.g
ACCDH893318DH893319
length1,143924
definitionDH893318|Mus musculus domesticus DNA, BAC clone: B6Ng01-077E22, 5' end.DH893319|Mus musculus domesticus DNA, BAC clone: B6Ng01-077E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,096,054 - 44,097,195)(44,291,931 - 44,292,534)
sequence
gaattcaactgaagtaggtaattatcaaagtgcttcagattttagcagga
gtgtgttcagtagtattatgatacaatggaaagcaggagtcaggtaatat
aatagcattcagtaccgaggagataaaggatgctcgtgggtcttcctgat
gacttaatcctcattccttgcctgggtggggaatgctctctgttgggcta
cattcataaggaagggccccgtttcttactttgaaatcaaatgaagcatt
tcttcccctttctctcatcttacagatcacatggtgcatattagctcagc
ttgctgagccaggtgctcttcgcagagcctcgaaagctgagcgaatattg
caaatcccccaggggtaggccaattccatttgctgtgactgaaggtcctg
ttgctaactgttgctttctgcccttgttttctttgtcttttttccccata
gccctctacagatcctttgtctaacttataggagccttgaaaattcctct
ttacttaatttcaccaggcttgttttctgtgacttgcaaacaaaaattgg
aaaaaacacaaagtatcctcacctgccttatgaaacttctggtacagaca
taactaatcgattcagtcttgtttccaacacatatttaagagtatgagaa
ttaacactgagacctatgtagaccacagctctttaaatccattcacatca
ttttcatttctgtatctatagatacaatccacctatgtgtgtttgtatgt
gtgtatgacaataatatatacaacatcatatataacattatatataatgt
catctcctccagaaagccttgccaggcctagggcaggcccatcctttgtg
ttttgggagcacagaccataatggtggctggtaacagcctgtggaatcgc
tccttctccctgaccattccttacagctcactctccttgtgtctcgtgca
gcagcgcatgctcctgggagaaactcaacataaatgaatagatcaaattt
gggaatttttacaaaagcaggaagtgtaatgtcattccaaagaaataaca
ggaacagaggctctgtggggtggagaaataaagaaagcatagaaacaagt
gccttttacttgagcaactacatggaaccctgggggtggggga
gaattcattttctgtagttattaaatattttctgtagatgtagggaaaat
gcattcttttagaataaatgcaaaagagtgatatttttttcctttctggt
tggtgactttttttttgttttttgttttttgtttttttgagacagggttt
ctctgtatagccctggctgtcctggagctcactttgtagaccaggctggc
ctcgaactcagaaatctgcctgcctctgcctcctgagtgctgggattggg
attaaaggcgtgcaccaccacgcccagctggttttttttttttttttttt
tggttggtgacttttaactctatatttgcatatgtgtttttatgtttcat
tttcattttgaagtcctgtttgcaaagttggtcctttcttgataaccaac
aacttcctacgtagatgtggaacttcccctcaatggtaagaggaacttac
catggcagccatggcaaactatgttacttagatttctcatacttgcattc
cttctgagagtctgggacttctggtatataagacatccgtacctgtaaaa
catatgtctcagctttccaatcactatgataaacactgtaaccaaaagga
acttggctacatcttcatgcaaaggaaagggttgcttggcttacatcttc
atgcaacaatgtaccagtgagggaggacaggatgggaattcaagcaagaa
ccttgagccaggagctaaagcagagagcatagaggggatgctgcttacta
acttgctctccaaagcttgtttcagtttacttcttttatatgccctagga
ccaccagcccaggaatggcactgtcccacagtagaccaggcctttccatt
atcaatcatccatcagaaaggccctacaaccctgtctacaggctgatgtg
atgaggcactttctatttgacgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_44096054_44097195
seq2: B6Ng01-077E22.b_47_1189

seq1  GAATTCAACTGAAGTAGGTAATTATCAAAGTGCTTCAGATTTTAGCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGAAGTAGGTAATTATCAAAGTGCTTCAGATTTTAGCAGGA  50

seq1  GTGTGTTCAGTAGTATTATGATACAATGGAAAGCAGGAGTCAGGTAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTCAGTAGTATTATGATACAATGGAAAGCAGGAGTCAGGTAATAT  100

seq1  AATAGCATTCAGTACCGAGGAGATAAAGGATGCTCGTGGGTCTTCCTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCATTCAGTACCGAGGAGATAAAGGATGCTCGTGGGTCTTCCTGAT  150

seq1  GACTTAATCCTCATTCCTTGCCTGGGTGGGGAATGCTCTCTGTTGGGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAATCCTCATTCCTTGCCTGGGTGGGGAATGCTCTCTGTTGGGCTA  200

seq1  CATTCATAAGGAAGGGCCCCGTTTCTTACTTTGAAATCAAATGAAGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATAAGGAAGGGCCCCGTTTCTTACTTTGAAATCAAATGAAGCATT  250

seq1  TCTTCCCCTTTCTCTCATCTTACAGATCACATGGTGCATATTAGCTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCCTTTCTCTCATCTTACAGATCACATGGTGCATATTAGCTCAGC  300

seq1  TTGCTGAGCCAGGTGCTCTTCGCAGAGCCTCGAAAGCTGAGCGAATATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAGCCAGGTGCTCTTCGCAGAGCCTCGAAAGCTGAGCGAATATTG  350

seq1  CAAATCCCCCAGGGGTAGGCCAATTCCATTTGCTGTGACTGAAGGTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCCCCAGGGGTAGGCCAATTCCATTTGCTGTGACTGAAGGTCCTG  400

seq1  TTGCTAACTGTTGCTTTCTGCCCTTGTTTTCTTTGTCTTTTTTCCCCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAACTGTTGCTTTCTGCCCTTGTTTTCTTTGTCTTTTTTCCCCATA  450

seq1  GCCCTCTACAGATCCTTTGTCTAACTTATAGGAGCCTTGAAAATTCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTACAGATCCTTTGTCTAACTTATAGGAGCCTTGAAAATTCCTCT  500

seq1  TTACTTAATTTCACCAGGCTTGTTTTCTGTGACTTGCAAACAAAAATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAATTTCACCAGGCTTGTTTTCTGTGACTTGCAAACAAAAATTGG  550

seq1  AAAAAACACAAAGTATCCTCACCTGCCTTATGAAACTTCTGGTACAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACACAAAGTATCCTCACCTGCCTTATGAAACTTCTGGTACAGACA  600

seq1  TAACTAATCGATTCAGTCTTGTTTCCAACACATATTTAAGAGTATGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAATCGATTCAGTCTTGTTTCCAACACATATTTAAGAGTATGAGAA  650

seq1  TTAACACTGAGACCTATGTAGACCACAGCTCTTTAAATCCATTCACATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACTGAGACCTATGTAGACCACAGCTCTTTAAATCCATTCACATCA  700

seq1  TTTTCATTTCTGTATCTATAGATACAATCCACCTATGTGTGTTTGTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTCTGTATCTATAGATACAATCCACCTATGTGTGTTTGTATGT  750

seq1  GTGTATGACAATAATATATACAACATCATATATAACATTATATATAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGACAATAATATATACAACATCATATATAACATTATATATAATGT  800

seq1  CATCTCCTCCAGAAAGCCTTGCCAGGCCTAGGGCAGGCCCATCCTTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCTCCAGAAAGCCTTGCCAGGCCTAGGGCAGGCCCATCCTTTGTG  850

seq1  TTTTGGGAGCACAGACCATAATGGTGGCTGGTAACAGCCTGTGGAATCGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGAGCACAGACCATAATGGTGGCTGGTAACAGCCTGTGGAATCGC  900

seq1  TCCTTCTCCCTGACCATTCCTTACAGCTCACTCTCCTTGTGTCTCGTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCCCTGACCATTCCTTACAGCTCACTCTCCTTGTGTCTCGTGCA  950

seq1  GCAGCGCATGCTCCTGGGAGAAACTCAACATAAATGAATAGACCAAA-TT  999
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  GCAGCGCATGCTCCTGGGAGAAACTCAACATAAATGAATAGATCAAATTT  1000

seq1  GGGAATTTTTACAAAAAGCAAGAAGTGTAATGTCATTCCAAAGAAATAAC  1049
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  GGGAATTTTTAC-AAAAGCAGGAAGTGTAATGTCATTCCAAAGAAATAAC  1049

seq1  AAGGAACAGAAGCTCTGTGGG--TGAGAAATAAAGAAAGCATAGAAAACA  1097
       ||||||||| ||||||||||   |||||||||||||||||||| |||||
seq2  -AGGAACAGAGGCTCTGTGGGGTGGAGAAATAAAGAAAGCATAG-AAACA  1097

seq1  AGTG-CTTTACCTTGAGCAAACTACATGGGACCCT-GGGGTGGGGGA  1142
      |||| ||||  ||||||| |||||||||| ||||| |||||||||||
seq2  AGTGCCTTTTACTTGAGC-AACTACATGGAACCCTGGGGGTGGGGGA  1143

seq1: chr11_44291931_44292534
seq2: B6Ng01-077E22.g_67_670 (reverse)

seq1  AAGTTCCTTTTGGTTACAGTGTTTATCATAGTGATTGGAAAGCTGAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTTTTGGTTACAGTGTTTATCATAGTGATTGGAAAGCTGAGACA  50

seq1  TATGTTTTACAGGTACGGATGTCTTATATACCAGAAGTCCCAGACTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTACAGGTACGGATGTCTTATATACCAGAAGTCCCAGACTCTCA  100

seq1  GAAGGAATGCAAGTATGAGAAATCTAAGTAACATAGTTTGCCATGGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAATGCAAGTATGAGAAATCTAAGTAACATAGTTTGCCATGGCTGC  150

seq1  CATGGTAAGTTCCTCTTACCATTGAGGGGAAGTTCCACATCTACGTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAAGTTCCTCTTACCATTGAGGGGAAGTTCCACATCTACGTAGGA  200

seq1  AGTTGTTGGTTATCAAGAAAGGACCAACTTTGCAAACAGGACTTCAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTGGTTATCAAGAAAGGACCAACTTTGCAAACAGGACTTCAAAAT  250

seq1  GAAAATGAAACATAAAAACACATATGCAAATATAGAGTTAAAAGTCACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAAACATAAAAACACATATGCAAATATAGAGTTAAAAGTCACCA  300

seq1  ACCAAAAAAAAAAAAAAAAAAAACCAGCTGGGCGTGGTGGTGCACGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAAAAAAAAAAAAAAAAACCAGCTGGGCGTGGTGGTGCACGCCTT  350

seq1  TAATCCCAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGTT  400

seq1  CGAGGCCAGCCTGGTCTACAAAGTGAGCTCCAGGACAGCCAGGGCTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCCAGCCTGGTCTACAAAGTGAGCTCCAGGACAGCCAGGGCTATAC  450

seq1  AGAGAAACCCTGTCTCAAAAAAACAAAAAACAAAAAACAAAAAAAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACCCTGTCTCAAAAAAACAAAAAACAAAAAACAAAAAAAAAGTC  500

seq1  ACCAACCAGAAAGGAAAAAAATATCACTCTTTTGCATTTATTCTAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAGAAAGGAAAAAAATATCACTCTTTTGCATTTATTCTAAAAGA  550

seq1  ATGCATTTTCCCTACATCTACAGAAAATATTTAATAACTACAGAAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTTCCCTACATCTACAGAAAATATTTAATAACTACAGAAAATGA  600

seq1  ATTC  604
      ||||
seq2  ATTC  604