BAC Information

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BAC

Clone NameB6Ng01-078H18
Chromosome11 (Build37)
Map Location 13,384,084 - 13,384,711
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627244
Downstream geneLOC432535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078H18.b
ACCDH894170
length1,059
definitionDH894170|Mus musculus domesticus DNA, BAC clone: B6Ng01-078H18, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcttcttgtgagatttcctctgtaactctatgagccaaacac
ttggcggtatcatatcacagcatgattctatataacacttaatggaactc
ctaacaacatttataacacttgacctacagtgacccgcctgatccacaga
gatataaaatcttcatatgcccttttcataaatgttccaaaaatacttta
aagagacatttattctgcatgagtttagtgggaaaatgaggtatgtgtgg
agaaaggtgattgactggggttttctacaatggtctttgttgtaaagtgg
ctcaattgatggtggtggggtgagcactatacttacctgtgggcataaga
acagatagaattagggattatgctactttagtaaagtggcaactgtagat
tctcctccaagaccactatctctgtagatggttaaatttccaggatgtga
catgttttctccattgctgaatgtatcttaagtctaattagagagctgtt
ggttttcaaaaagtcatgtgtgccatttctacacccaaaggttatcatac
catgctagtgtatctgtaccattgctaaatagagttgtttactttccacc
tgtggaagcatttatggtaatttggtaccatgaaagccaaacctcatgga
agagaaatgtaccatcctgttaattttctgtgaactcattggtgtggaga
aatgcatatatttgttttcaaagcaaagagtctctctctctgtctgcctc
tctctgtctctcccttgcacgctctctctttctctctctctctctgtatg
cacatgtgtgcatgtcttatttttaaagtgtaaaaaaataaataaaaata
gattaactgaactaacttttatttcaaaatcaaatgtatagtaatactat
aattttatcccataaataagaaagaaatcatcttgttctaaattatcata
atttatgatgataggcactttaaatagtgatatgaacttcaattttttaa
atttctgaatcaaataatgtggaaatatcagatcaaacttattcctaaat
atccttaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_13384084_13384711
seq2: B6Ng01-078H18.b_468_1098 (reverse)

seq1  ----------TTTAAGGATAAGTTTTGATCCTGA-ATATTCACATTAATT  39
                |||| | ||||| |||||| |||| || | |||||| |||
seq2  TTTAAGGATATTTAGGAATAAG-TTTGAT-CTGATATTTCCACATT-ATT  47

seq1  TGAATTCAGAAAATTTAAAAAAATTGAAGTTCATATCACTATTTAAAGTT  89
      || |||||||||  || ||||||||||||||||||||||||||||||| |
seq2  TG-ATTCAGAAA--TTTAAAAAATTGAAGTTCATATCACTATTTAAAG-T  93

seq1  GCCTATCATCATAAATTATGAATAATTTAGAACAAGATGATTTCTTTCTT  139
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCCTATCATCATAAATTATG-ATAATTTAGAACAAGATGATTTCTTTCTT  142

seq1  ATTTATGGGATAAAATTATAGTATTACTATACATTTGATTTTGAAATAAA  189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGGGATAAAATTATAGTATTACTATACATTTGATTTTGAAATAAA  192

seq1  AGTTAGTTCAGTTAATCTATTTTTATTTATTTTTTTACACTTTAAAAATA  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTTCAGTTAATCTATTTTTATTTATTTTTTTACACTTTAAAAATA  242

seq1  AGACATGCACACATGTGCATACAGAGAGAGAGAGAGAAAGAGAGAGCGTG  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGCACACATGTGCATACAGAGAGAGAGAGAGAAAGAGAGAGCGTG  292

seq1  CAAGGGAGAGACAGAGAGAGGCAGACAGAGAGAGAGACTCTTTGCTTTGA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAGAGACAGAGAGAGGCAGACAGAGAGAGAGACTCTTTGCTTTGA  342

seq1  AAACAAATATATGCATTTCTCCACACCAATGAGTTCACAGAAAATTAACA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATATATGCATTTCTCCACACCAATGAGTTCACAGAAAATTAACA  392

seq1  GGATGGTACATTTCTCTTCCATGAGGTTTGGCTTTCATGGTACCAAATTA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTACATTTCTCTTCCATGAGGTTTGGCTTTCATGGTACCAAATTA  442

seq1  CCATAAATGCTTCCACAGGTGGAAAGTAAACAACTCTATTTAGCAATGGT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAATGCTTCCACAGGTGGAAAGTAAACAACTCTATTTAGCAATGGT  492

seq1  ACAGATACACTAGCATGGTATGATAACCTTTGGGTGTAGAAATGGCACAC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATACACTAGCATGGTATGATAACCTTTGGGTGTAGAAATGGCACAC  542

seq1  ATGACTTTTTGAAAACCAACAGCTCTCTAATTAGACTTAAGATACATTCA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTTTGAAAACCAACAGCTCTCTAATTAGACTTAAGATACATTCA  592

seq1  GCAATGGAGAAAACATGTCACATCCTGGAAATTTAACCA  628
      |||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGAGAAAACATGTCACATCCTGGAAATTTAACCA  631