BAC Information

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BAC

Clone NameB6Ng01-080I16
Chromosome11 (Build37)
Map Location 14,733,742 - 14,884,214
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC432535, 1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673
Downstream geneLOC432537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080I16.bB6Ng01-080I16.g
ACCDH895652DH895653
length1,056856
definitionDH895652|Mus musculus domesticus DNA, BAC clone: B6Ng01-080I16, 5' end.DH895653|Mus musculus domesticus DNA, BAC clone: B6Ng01-080I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,883,166 - 14,884,214)(14,733,742 - 14,734,597)
sequence
gaattcttacccccccatctagttcattaccattgatgattgacttagtt
tattcttttgtttttagattttatctttatgtatgcgtggatgagtgtct
gtgtgaatgcaggaaattacacaaggtaaaagagacatcatatcccttga
agccagaattatatagttataagctgccatcccttggagctggagcttcc
agaagtgggtcatggagaccaaactcatgacctctagaaaagccgttagt
gtttaaaatggatgcgccacgtctccaggcactgtgtctgtccttactct
ttaaagattgatcacaatcccagtttgagaccttcttcagttagtgaaat
aaagtcatagaatcatacttttaaatacaattttttatcaatagagaggt
ctttacttgcaaatttttactgcatttttttgccttaaattcaaattcta
atatcatcactttaatgtttttcttttcagaactatattactaaattcac
atatctcatttacattttgcaagcagtgtagaaagtatttttatctttta
tacttaagaacatatcaatgaattatgctgtgttaaaacattaataggtt
agatttgtattttaataatgcctgctgtaacacagaagttcaattaatta
aattatcagagcctggtttgatataagtgctctaggagtattctataaaa
tgctcacaaatgttctatgtactactggtattgtgttttataaaaaaagg
gaagaggccaggatttgtttttgtaaaggtgtgatatcgaggggtgcctt
agtgggcccatgctaaggcatctttttcctgtgaggttccagtcataaaa
cagatataatatagaatagactttatttagggcatgggaagtggagttga
gaagagatagacacacacaactctcacgcaccacacacagatagagagag
agagagatagagagagagagagagatagagatagatagacctggagggca
gcacaattgggtagggtgagggaagaatgggtcagtataacgtgcgccaa
agcaag
gaattcatttaactctttggcattcatttttattcaatcagtggaaaacc
atgacttacttgtcaaagatattattctgttaatgagcaaatgaatccaa
aatcatttctgcagctggaaactgtcagtacataacaaaaacttacaaaa
gtttgcatcttttggcacaaaacaatgagcacaaccagggttattgaaaa
tctgagttgatacttgtagcttctcacaacataagcataattataaaggc
aatgtggaagagtaatgttatagccatctccagtttttaatgttgtacag
tcaaaaaaaaaaaaaaaaaaaagaaaggaaaagagagcaacaactgtaga
gtttctattttttcaggtgatttttttctctctcaaatatgtataatatg
tttgcatgaattctgaaaatcaaaacaaatgagcaattggttagtgactc
tcacacaatccatattgaaggattatttttgtgaaaattcacttctttgg
atgattatttttgggtgggggcataccctcatagaagcaggaggagggta
gacaggatagggagattcttgggagtgggaatcaggaaaggggataacat
ttgaaatgtaaataaagaaaatatccaacatgaaaaaaaatatagtgatt
gaggaaaggaaaggctttcacaatagaaaagctcagtgattatttccctg
actcacaaacataaaattatttttcagaaatcatataaagtgttgtagat
ggtttctctaactttgctccctcctgcaactactgtattgaattttctct
gaatgtatgattttacaaaatccaggtaagttgggatgtcaggtaagctt
aaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_14883166_14884214
seq2: B6Ng01-080I16.b_41_1096 (reverse)

seq1  CTTGCT-------------TCCTGACCCCATTCTTCCCTCACCCTCTCCA  37
      ||||||             | |||| |||||||||||||||||||  |||
seq2  CTTGCTTTGGCGCACGTTATACTGA-CCCATTCTTCCCTCACCCTACCCA  49

seq1  ATTGTCCCTGCCCCTCCAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  87
      |||||  ||| |||||||| ||| ||| ||||| ||||||||||||||||
seq2  ATTGT-GCTG-CCCTCCAGGTCTATCTATCTCTATCTCTCTCTCTCTCTC  97

seq1  TCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTTTGTGTGTG  137
      | ||||||||||||||| |||||||||| ||| ||| | | |||||||||
seq2  TATCTCTCTCTCTCTCTATCTGTGTGTG-GTGCGTGAGAG-TTGTGTGTG  145

seq1  TCTATTCTCTTCTCAACTCCACTTCCCATGCCCTAAATAAAGTCTATTCT  187
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTA-TCTCTTCTCAACTCCACTTCCCATGCCCTAAATAAAGTCTATTCT  194

seq1  ATATTATATCTGTTTTATGACTGGAACCTCACAGGAAAAAGATGCCTTAG  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATCTGTTTTATGACTGGAACCTCACAGGAAAAAGATGCCTTAG  244

seq1  CATGGGCCCACTAAGGCACCCCTCGATATCACACCTTTACAAAAACAAAT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCCCACTAAGGCACCCCTCGATATCACACCTTTACAAAAACAAAT  294

seq1  CCTGGCCTCTTCCCTTTTTTTATAAAACACAATACCAGTAGTACATAGAA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCTCTTCCCTTTTTTTATAAAACACAATACCAGTAGTACATAGAA  344

seq1  CATTTGTGAGCATTTTATAGAATACTCCTAGAGCACTTATATCAAACCAG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGAGCATTTTATAGAATACTCCTAGAGCACTTATATCAAACCAG  394

seq1  GCTCTGATAATTTAATTAATTGAACTTCTGTGTTACAGCAGGCATTATTA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGATAATTTAATTAATTGAACTTCTGTGTTACAGCAGGCATTATTA  444

seq1  AAATACAAATCTAACCTATTAATGTTTTAACACAGCATAATTCATTGATA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAATCTAACCTATTAATGTTTTAACACAGCATAATTCATTGATA  494

seq1  TGTTCTTAAGTATAAAAGATAAAAATACTTTCTACACTGCTTGCAAAATG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTAAGTATAAAAGATAAAAATACTTTCTACACTGCTTGCAAAATG  544

seq1  TAAATGAGATATGTGAATTTAGTAATATAGTTCTGAAAAGAAAAACATTA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGATATGTGAATTTAGTAATATAGTTCTGAAAAGAAAAACATTA  594

seq1  AAGTGATGATATTAGAATTTGAATTTAAGGCAAAAAAATGCAGTAAAAAT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATGATATTAGAATTTGAATTTAAGGCAAAAAAATGCAGTAAAAAT  644

seq1  TTGCAAGTAAAGACCTCTCTATTGATAAAAAATTGTATTTAAAAGTATGA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGTAAAGACCTCTCTATTGATAAAAAATTGTATTTAAAAGTATGA  694

seq1  TTCTATGACTTTATTTCACTAACTGAAGAAGGTCTCAAACTGGGATTGTG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGACTTTATTTCACTAACTGAAGAAGGTCTCAAACTGGGATTGTG  744

seq1  ATCAATCTTTAAAGAGTAAGGACAGACACAGTGCCTGGAGACGTGGCGCA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCTTTAAAGAGTAAGGACAGACACAGTGCCTGGAGACGTGGCGCA  794

seq1  TCCATTTTAAACACTAACGGCTTTTCTAGAGGTCATGAGTTTGGTCTCCA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTAAACACTAACGGCTTTTCTAGAGGTCATGAGTTTGGTCTCCA  844

seq1  TGACCCACTTCTGGAAGCTCCAGCTCCAAGGGATGGCAGCTTATAACTAT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCACTTCTGGAAGCTCCAGCTCCAAGGGATGGCAGCTTATAACTAT  894

seq1  ATAATTCTGGCTTCAAGGGATATGATGTCTCTTTTACCTTGTGTAATTTC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCTGGCTTCAAGGGATATGATGTCTCTTTTACCTTGTGTAATTTC  944

seq1  CTGCATTCACACAGACACTCATCCACGCATACATAAAGATAAAATCTAAA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTCACACAGACACTCATCCACGCATACATAAAGATAAAATCTAAA  994

seq1  AACAAAAGAATAAACTAAGTCAATCATCAATGGTAATGAACTAGATGGGG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAGAATAAACTAAGTCAATCATCAATGGTAATGAACTAGATGGGG  1044

seq1  GGGTAAGAATTC  1049
      ||||||||||||
seq2  GGGTAAGAATTC  1056

seq1: chr11_14733742_14734597
seq2: B6Ng01-080I16.g_67_922

seq1  GAATTCATTTAACTCTTTGGCATTCATTTTTATTCAATCAGTGGAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAACTCTTTGGCATTCATTTTTATTCAATCAGTGGAAAACC  50

seq1  ATGACTTACTTGTCAAAGATATTATTCTGTTAATGAGCAAATGAATCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTACTTGTCAAAGATATTATTCTGTTAATGAGCAAATGAATCCAA  100

seq1  AATCATTTCTGCAGCTGGAAACTGTCAGTACATAACAAAAACTTACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTCTGCAGCTGGAAACTGTCAGTACATAACAAAAACTTACAAAA  150

seq1  GTTTGCATCTTTTGGCACAAAACAATGAGCACAACCAGGGTTATTGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCATCTTTTGGCACAAAACAATGAGCACAACCAGGGTTATTGAAAA  200

seq1  TCTGAGTTGATACTTGTAGCTTCTCACAACATAAGCATAATTATAAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTGATACTTGTAGCTTCTCACAACATAAGCATAATTATAAAGGC  250

seq1  AATGTGGAAGAGTAATGTTATAGCCATCTCCAGTTTTTAATGTTGTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGAAGAGTAATGTTATAGCCATCTCCAGTTTTTAATGTTGTACAG  300

seq1  TCAAAAAAAAAAAAAAAAAAAAGAAAGGAAAAGAGAGCAACAACTGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAAAAAAAAAAAAAAAAGAAAGGAAAAGAGAGCAACAACTGTAGA  350

seq1  GTTTCTATTTTTTCAGGTGATTTTTTTCTCTCTCAAATATGTATAATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATTTTTTCAGGTGATTTTTTTCTCTCTCAAATATGTATAATATG  400

seq1  TTTGCATGAATTCTGAAAATCAAAACAAATGAGCAATTGGTTAGTGACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATGAATTCTGAAAATCAAAACAAATGAGCAATTGGTTAGTGACTC  450

seq1  TCACACAATCCATATTGAAGGATTATTTTTGTGAAAATTCACTTCTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAATCCATATTGAAGGATTATTTTTGTGAAAATTCACTTCTTTGG  500

seq1  ATGATTATTTTTGGGTGGGGGCATACCCTCATAGAAGCAGGAGGAGGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTATTTTTGGGTGGGGGCATACCCTCATAGAAGCAGGAGGAGGGTA  550

seq1  GACAGGATAGGGAGATTCTTGGGAGTGGGAATCAGGAAAGGGGATAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGATAGGGAGATTCTTGGGAGTGGGAATCAGGAAAGGGGATAACAT  600

seq1  TTGAAATGTAAATAAAGAAAATATCCAACATGAAAAAAAATATAGTGA-T  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTGAAATGTAAATAAAGAAAATATCCAACATGAAAAAAAATATAGTGATT  650

seq1  GAGGAAAGGAAAGGCATTCACAATAGAAAAGCTCAGTGATTATTT-CCTG  698
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  GAGGAAAGGAAAGGCTTTCACAATAGAAAAGCTCAGTGATTATTTCCCTG  700

seq1  ACTCACAAACATAAAATTATTTTTCAGAAATCATATAAAGTGTTGTAGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAAACATAAAATTATTTTTCAGAAATCATATAAAGTGTTGTAGAT  750

seq1  GGTTTTCTCTAACTTTGCTTCCTCCTGCAACTACTGTTATTGAATTTTCT  798
      || |||||||||||||||| |||||||||||||||| |||||||||||||
seq2  GG-TTTCTCTAACTTTGCTCCCTCCTGCAACTACTG-TATTGAATTTTCT  798

seq1  CTGAATGTATGATTTTACAAAATCCAGGTAAGTATGGATGTCAGGTAAGC  848
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  CTGAATGTATGATTTTACAAAATCCAGGTAAGTTGGGATGTCAGGTAAGC  848

seq1  TTAAAGAC  856
      ||||||||
seq2  TTAAAGAC  856