BAC Information

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BAC

Clone NameB6Ng01-081K20
Chromosome11 (Build37)
Map Location 92,839,324 - 92,840,051
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382545
Downstream geneLOC100039286, Car10, LOC629636, Utp18, Mbtd1, Nme2, Nme1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081K20.bB6Ng01-081K20.g
ACCDH896453DH896454
length7291,158
definitionDH896453|Mus musculus domesticus DNA, BAC clone: B6Ng01-081K20, 5' end.DH896454|Mus musculus domesticus DNA, BAC clone: B6Ng01-081K20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagccacaatgaattaaccctggaaatgactagatagtccatt
gttgttaagcacaataaaatatttaatcagtttcctaatgacgactaaat
tttcactgttaagagtaacaacatgcccccatgcaccttatccttgtttc
tatgattttgaaagtttgtgtggctacctctgtaagtgtatagttcatga
tgtcaccatgcattgctacagtctccagcaggtcccaaacaaatgtgcag
gctgtccatgtcctcatattttctgcaattagcattaggttctctaaacc
atttaaaatttgtctttcaatctgaagaacacaagtgccatcttactctt
cttatgcgtattttcagagttaaaacaactacccaactatatctatctat
ctatctatctatctatctatctatctatctatctatctatctatctacct
acctatctacctatctatctatgctgtatataatacacatataatgtatg
cattaacattttaacatttcataactttgtatcttttacccattatttct
ttaaaaagtgtgtttatataattcctactgattgattaatatatacagga
caacacaacaatttctttgcacaactctggcttccctggaactgtctctc
tgtctctgctctgtttctctctctctttctcttttctctctctctctctc
tctctctctctctctctttctctctctct
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacctaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtactcactgataagtggatattagccccaaac
ctaggatacccaagatataagatataatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttatgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggccctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcataggctcccaat
ggagagctagagaagtagccaagagctcaagggatctgcaccctatagtg
gaacaacattatgactacagtacccggagctcttgactcctgctgcatat
atatcaaagatgcctagtcggcctatactggaagagaggcattggaactt
gcaacttttatgccagtactggaacctaggccaaagtgggatggtggtgc
tgtaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92839324_92840051
seq2: B6Ng01-081K20.b_45_773 (reverse)

seq1  AGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG-AAAGA  49
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAGA  50

seq1  GAAAGAGAGAGAGAAACAGAGCAGAGACAGAGAGACAGTTCCAGGGAAGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGAGAGAAACAGAGCAGAGACAGAGAGACAGTTCCAGGGAAGC  100

seq1  CAGAGTTGTGCAAAGAAATTGTTGTGTTGTCCTGTATATATTAATCAATC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTGTGCAAAGAAATTGTTGTGTTGTCCTGTATATATTAATCAATC  150

seq1  AGTAGGAATTATATAAACACACTTTTTAAAGAAATAATGGGTAAAAGATA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAATTATATAAACACACTTTTTAAAGAAATAATGGGTAAAAGATA  200

seq1  CAAAGTTATGAAATGTTAAAATGTTAATGCATACATTATATGTGTATTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTATGAAATGTTAAAATGTTAATGCATACATTATATGTGTATTAT  250

seq1  ATACAGCATAGATAGATAGGTAGATAGGTAGGTAGATAGATAGATAGATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCATAGATAGATAGGTAGATAGGTAGGTAGATAGATAGATAGATA  300

seq1  GATAGATAGATAGATAGATAGATAGATAGATAGATAGATATAGTTGGGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGATAGATAGATAGATAGATAGATAGATAGATATAGTTGGGTA  350

seq1  GTTGTTTTAACTCTGAAAATACGCATAAGAAGAGTAAGATGGCACTTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTAACTCTGAAAATACGCATAAGAAGAGTAAGATGGCACTTGTG  400

seq1  TTCTTCAGATTGAAAGACAAATTTTAAATGGTTTAGAGAACCTAATGCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGATTGAAAGACAAATTTTAAATGGTTTAGAGAACCTAATGCTA  450

seq1  ATTGCAGAAAATATGAGGACATGGACAGCCTGCACATTTGTTTGGGACCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGAAAATATGAGGACATGGACAGCCTGCACATTTGTTTGGGACCT  500

seq1  GCTGGAGACTGTAGCAATGCATGGTGACATCATGAACTATACACTTACAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGACTGTAGCAATGCATGGTGACATCATGAACTATACACTTACAG  550

seq1  AGGTAGCCACACAAACTTTCAAAATCATAGAAACAAGGATAAGGTGCATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCCACACAAACTTTCAAAATCATAGAAACAAGGATAAGGTGCATG  600

seq1  GGGGCATGTTGTTACTCTTAACAGTGAAAATTTAGTCGTCATTAGGAAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATGTTGTTACTCTTAACAGTGAAAATTTAGTCGTCATTAGGAAAC  650

seq1  TGATTAAATATTTTATTGTGCTTAACAACAATGGACTATCTAGTCATTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAATATTTTATTGTGCTTAACAACAATGGACTATCTAGTCATTTC  700

seq1  CAGGGTTAATTCATTGTGGCTATGAATTC  728
      |||||||||||||||||||||||||||||
seq2  CAGGGTTAATTCATTGTGGCTATGAATTC  729