BAC Information

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BAC

Clone NameB6Ng01-082H01
Chromosome11 (Build37)
Map Location 27,596,012 - 27,596,726
singlet/doubletsinglet
Overlap geneLOC100042377
Upstream genePpia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
Downstream geneEG626571, Ccdc85a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082H01.bB6Ng01-082H01.g
ACCDH896993DH896994
length938390
definitionDH896993|Mus musculus domesticus DNA, BAC clone: B6Ng01-082H01, 5' end.DH896994|Mus musculus domesticus DNA, BAC clone: B6Ng01-082H01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctcttttgctttccctgcactaagtactgatgtccttctta
acacttcagtggcagaaattgagtatcataggtattggtgggtgttgatg
ggtacctagctgttttatttatttattttttggaatctgtttctttaatt
ataaatttgttatttcagttaaaatataattatataattttctcccttgg
tttccttcccccaaccctgccatagaccagccttggcttggaaaggggtt
cctgagaaaaggggtagctcagaggtatgaaaataaatgactctaattca
aagtgtgggcccaagctgatggcctagaatctattaatgtggttttcctg
actgctctttctttctctgtctctctctgtctctctgtctgtctgtcttt
ttctctctatctgtttgagttctgctttgctctagacaactttttcttga
tattctaaaaactgtatggttgcaacagctctctctcttggctagtaaaa
atgtgtaaaagctatctggatagctgatgggttttctcactagggtcaga
aaagctgctatacaaattattggatcttctgaccaagtcaaaaatcctgt
tagaaaaaaaaaaaaacataccgaagagctatttttgctccccagacatc
tccagacagctgagttcttctctctagagaaaattctaaagatctgtcat
catttttttgctagctcatcttatgaagaccaaaagcccagacaataagc
tagttgtgtggcacccttccctgaaattatcatttccacaatgcctgggc
ctaaccttgctctgtcctaggctgagcctgactcaggaatttatctgtct
ttttaatataaacaaaaactttacctggggtgagttcttctgtgataact
actccctatatctgtttttccccttacttagtaatttt

accagatacctgagtttggacagactctcaggactcaaggggtgaacctt
aggtgaaataaccaactgtagagaaagggagcttataaagtccaccttca
gcagaaagacaaggcatcaagtgatggagtaggttgccatcccacagtca
aaactctgacccataattgttcctgtctgaaagaacttcaggcatggaaa
tggagaggagcttgaggaaaagaaggtctagcaacaggcccaaagtggga
tccagcttaaggggtaatctcaagtctggacagacactattactgaggct
atggagatctaacaaaaagggacctatcatgactgcccaacaagcagctg
aaggagtcatatatagatatataaggggaggggaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_27596012_27596726
seq2: B6Ng01-082H01.b_42_756

seq1  GAATTCTCTCTCTTTTGCTTTCCCTGCACTAAGTACTGATGTCCTTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTTTTGCTTTCCCTGCACTAAGTACTGATGTCCTTCTTA  50

seq1  ACACTTCAGTGGCAGAAATTGAGTATCATAGGTATTGGTGGGTGTTGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCAGTGGCAGAAATTGAGTATCATAGGTATTGGTGGGTGTTGATG  100

seq1  GGTACCTAGCTGTTTTATTTATTTATTTTTTGGAATCTGTTTCTTTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTAGCTGTTTTATTTATTTATTTTTTGGAATCTGTTTCTTTAATT  150

seq1  ATAAATTTGTTATTTCAGTTAAAATATAATTATATAATTTTCTCCCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTGTTATTTCAGTTAAAATATAATTATATAATTTTCTCCCTTGG  200

seq1  TTTCCTTCCCCCAACCCTGCCATAGACCAGCCTTGGCTTGGAAAGGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCCCCCAACCCTGCCATAGACCAGCCTTGGCTTGGAAAGGGGTT  250

seq1  CCTGAGAAAAGGGGTAGCTCAGAGGTATGAAAATAAATGACTCTAATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAAAAGGGGTAGCTCAGAGGTATGAAAATAAATGACTCTAATTCA  300

seq1  AAGTGTGGGCCCAAGCTGATGGCCTAGAATCTATTAATGTGGTTTTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGGCCCAAGCTGATGGCCTAGAATCTATTAATGTGGTTTTCCTG  350

seq1  ACTGCTCTTTCTTTCTCTGTCTCTCTCTGTCTCTCTGTCTGTCTGTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCTTTCTTTCTCTGTCTCTCTCTGTCTCTCTGTCTGTCTGTCTTT  400

seq1  TTCTCTCTATCTGTTTGAGTTCTGCTTTGCTCTAGACAACTTTTTCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTATCTGTTTGAGTTCTGCTTTGCTCTAGACAACTTTTTCTTGA  450

seq1  TATTCTAAAAACTGTATGGTTGCAACAGCTCTCTCTCTTGGCTAGTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAAAAACTGTATGGTTGCAACAGCTCTCTCTCTTGGCTAGTAAAA  500

seq1  ATGTGTAAAAGCTATCTGGATAGCTGATGGGTTTTCTCACTAGGGTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAAAAGCTATCTGGATAGCTGATGGGTTTTCTCACTAGGGTCAGA  550

seq1  AAAGCTGCTATACAAATTATTGGATCTTCTGACCAAGTCAAAAATCCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGCTATACAAATTATTGGATCTTCTGACCAAGTCAAAAATCCTGT  600

seq1  TAGAAAAAAAAAAAAACATACCGAAGAGCTATTTTTGCTCCCCAGACATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAAAAAAAAAACATACCGAAGAGCTATTTTTGCTCCCCAGACATC  650

seq1  TCCAGACAGCTGAGTTCTTCTCTCTAGAGAAAATTCTAAAGATCTGTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACAGCTGAGTTCTTCTCTCTAGAGAAAATTCTAAAGATCTGTCAT  700

seq1  CATTTTTTTGCTAGC  715
      |||||||||||||||
seq2  CATTTTTTTGCTAGC  715


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