BAC Information

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BAC

Clone NameB6Ng01-083F08
Chromosome11 (Build37)
Map Location 91,121,573 - 91,122,706
singlet/doubletsinglet
Overlap genenone
Upstream geneMmd, Hlf, Stxbp4, LOC100039267, Cox11, Tom1l1, LOC638903
Downstream geneEG664976, Kif2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083F08.bB6Ng01-083F08.g
ACCDH897624DH897625
length1,1171,164
definitionDH897624|Mus musculus domesticus DNA, BAC clone: B6Ng01-083F08, 5' end.DH897625|Mus musculus domesticus DNA, BAC clone: B6Ng01-083F08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggttcaaatcccagcacctacacagtggtccacaacttgtaac
tccacacccagtaagccctcttctggccctctgtgggcagtgcacacatg
tgatgaaaaaaacacatgcagataaacacgcatacatagataaaaataaa
caaatgttaaattatccatttagaataacaaaaatagctttgggagccgg
taggaatcatttatctctcagctttgtggcttattagctaagagattgta
cccaaaaacctctgttcttcaggttagttctccggaacatggattcaata
atacatacattgcaaagctgttataagttttttttttcttttgagacatt
atattttaaactattcttaggagaaatctaagaattctagtttctttcta
ttgggttagtggacaagattatttgaaatttactgaaggtttattaagct
ccagcgaggcacattcttttaaaagagagcactctgaattctaggaaaga
gaagtatgtctccacacagcatttcagggaaccacagatcccttgaattt
aaataattcctgcaaataggcctggctaaagtttcatttcctcaaataga
ttactttttataatcgactcttacttagtacctctgcaggctcttctctg
cttcactgcatccattcattctccctgactctatcttgttatgccccaca
gaaggcagattcttgtagcgtgtgttacccttatgctcttagtcaccctc
tcccgtatggatctggacagtgggagatatcacatgagactgaaaaacaa
ggggctgaaggaggtcggtgtgtttttttgtttttgctgtagcctggtcc
tgtctctttgtggtgctgatgtgcaggtgtgctgatatggtttcttgggc
tcttcttctggcacagctgtactgctaggtcagggaacttccctgaaagt
agattccctccttgtgtttatttgtttcgagtctagaggtggcaatgttc
ccacttgctgtggtgcttccaggatgtgatactaacatccacccttctgg
cctgtactgcttttaagtccctatgagctcctctttgatgctgttgaact
gattattcactttctct
gaattctcacctgtggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcagattttattgaaag
gacgcagatgtagctgtctcttgtgagactatgccggggcctcagcaaca
cagaagtggatgttcacagtcagctaatggatgggatcataggctctatt
ggaggagctagagaaagtagccaggagctaaagggatctgcaatcctata
gtgaacacattatgagctaccagtacccgagctcttgactctagctgcta
tttatcaaagatgctagtcgcatcactggaagaaaggtcattggacttgc
actttaatgcctcagtacaggaattcaggccaaatggggagtggggtggg
caggggagtggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_91121573_91122706
seq2: B6Ng01-083F08.b_47_1163

seq1  GAATTCAGGTTCAAATCCCAGCACCTACACAGTGGTCCACAACTTGTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTCAAATCCCAGCACCTACACAGTGGTCCACAACTTGTAAC  50

seq1  TCCACACCCAGTAAGCCCTCTTCTGGCCCTCTGTGGGCAGTGCACACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACCCAGTAAGCCCTCTTCTGGCCCTCTGTGGGCAGTGCACACATG  100

seq1  TGATGAAAAAAACACATGCAGATAAACACGCATACATAGATAAAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAAAAAACACATGCAGATAAACACGCATACATAGATAAAAATAAA  150

seq1  CAAATGTTAAATTATCCATTTAGAATAACAAAAATAGCTTTGGGAGCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTAAATTATCCATTTAGAATAACAAAAATAGCTTTGGGAGCCGG  200

seq1  TAGGAATCATTTATCTCTCAGCTTTGTGGCTTATTAGCTAAGAGATTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATCATTTATCTCTCAGCTTTGTGGCTTATTAGCTAAGAGATTGTA  250

seq1  CCCAAAAACCTCTGTTCTTCAGGTTAGTTCTCCGGAACATGGATTCAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAACCTCTGTTCTTCAGGTTAGTTCTCCGGAACATGGATTCAATA  300

seq1  ATACATACATTGCAAAGCTGTTATAAGTTTTTTTTTTCTTTTGAGACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACATTGCAAAGCTGTTATAAGTTTTTTTTTTCTTTTGAGACATT  350

seq1  ATATTTTAAACTATTCTTAGGAGAAATCTAAGAATTCTAGTTTCTTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAAACTATTCTTAGGAGAAATCTAAGAATTCTAGTTTCTTTCTA  400

seq1  TTGGGTTAGTGGACAAGATTATTTGAAATTTACTGAAGGTTTATTAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTAGTGGACAAGATTATTTGAAATTTACTGAAGGTTTATTAAGCT  450

seq1  CCAGCGAGGCACATTCTTTTAAAAGAGAGCACTCTGAATTCTAGGAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCGAGGCACATTCTTTTAAAAGAGAGCACTCTGAATTCTAGGAAAGA  500

seq1  GAAGTATGTCTCCACACAGCATTTCAGGGAACCACAGATCCCTTGAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATGTCTCCACACAGCATTTCAGGGAACCACAGATCCCTTGAATTT  550

seq1  AAATAATTCCTGCAAATAGGCCTGGCTAAAGTTTCATTTCCTCAAATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTCCTGCAAATAGGCCTGGCTAAAGTTTCATTTCCTCAAATAGA  600

seq1  TTACTTTTTATAATCGACTCTTACTTAGTACCTCTGCAGGCTCTTCTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTTATAATCGACTCTTACTTAGTACCTCTGCAGGCTCTTCTCTG  650

seq1  CTTCACTGCATCCATTCATTCTCCCTGACTCTATCTTGTTATGCCCCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGCATCCATTCATTCTCCCTGACTCTATCTTGTTATGCCCCACA  700

seq1  GAAGGCAGATTCTTGTAGCGTGTGTTACCCTTATGCTCTTAGTCACCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGATTCTTGTAGCGTGTGTTACCCTTATGCTCTTAGTCACCCTC  750

seq1  TCCCGTATGGATCTGGACAGTGGGAGATATCACATGAGACTGAAAAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTATGGATCTGGACAGTGGGAGATATCACATGAGACTGAAAAACAA  800

seq1  GGGGCTGAAGGAGGTCGGTGTGTTTTTTTGTTTTTGCTGTAGCCTGGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGAAGGAGGTCGGTGTGTTTTTTTGTTTTTGCTGTAGCCTGGTCC  850

seq1  TGTCTCTTTGTGGTGCTGATGTGCAGGTGTGCTGATATGGTTTCTTGGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTTGTGGTGCTGATGTGCAGGTGTGCTGATATGGTTTCTTGGGC  900

seq1  TCTTCTTCTGGCACAGCTGTACTGCTAAGGTCAGGGAAC-TCCCTGAAAG  949
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  TCTTCTTCTGGCACAGCTGTACTGCT-AGGTCAGGGAACTTCCCTGAAAG  949

seq1  TAAGATTCCCCTCCTTGTGTTTATTTTGTTTCGAGTCTAGAGGTGGCAAA  999
      | ||||| ||||||||||||||| ||||||||||||||||||||||| ||
seq2  T-AGATT-CCCTCCTTGTGTTTA-TTTGTTTCGAGTCTAGAGGTGGC-AA  995

seq1  TGTTCCCACTTGCTGTGGTGCTTCCAGGAATGTGAATTAACTAACATCCA  1049
      |||||||||||||||||||||||||||| ||||||    |||||||||||
seq2  TGTTCCCACTTGCTGTGGTGCTTCCAGG-ATGTGA---TACTAACATCCA  1041

seq1  CCCTTCTGGCCTGTACTGCTTTTTAAGGTCCCTTATGAAGCTCTCCTTTG  1099
      |||||||||||||||||||||||  | ||||| |||| |||||  |||||
seq2  CCCTTCTGGCCTGTACTGCTTTT--AAGTCCC-TATG-AGCTCCTCTTTG  1087

seq1  ATGCCTGTTGAAACTTGATTATATTCACTTTCTCT  1134
      ||| ||||||||   ||||  ||||||||||||||
seq2  ATG-CTGTTGAA--CTGAT--TATTCACTTTCTCT  1117