BAC Information

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BAC

Clone NameB6Ng01-084H06
Chromosome11 (Build37)
Map Location 91,751,432 - 91,752,724
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664976, Kif2b
Downstream geneLOC382545
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084H06.b
ACCDH898406
length1,248
definitionDH898406|Mus musculus domesticus DNA, BAC clone: B6Ng01-084H06, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagcagttgagattgtctttgcaagacagatgcaggttcaggc
cacaaaaatgtccagcatgtgaataagaagaagctaaaggctaatgatag
ctactggaagaaagaaaattgctgttttgttgttgttgttgttttatctg
tgtatgcccaagtggaactgtgtcaccagacataatctgagaaggttgaa
cagattcagaaaacccagtattctcatatatgtgaccagtaggcatttca
tctgctcctgatatggttcctgtcctggaccacaacaacccacatggaga
tattgaccactagtcaagtaccacagagttctccatgccaatgaggtatc
cagatgggctggtcacagggtataaccaataagcttcctatcctggatat
cccttcctgcaaatggtctataatctcttgtccaccccaagtaagttgtg
tgcacccattttccattgtgaacaatgaataaactgtttggccaagcaaa
gactgtctctctcatcaagaacctctgtgggggaagccttcatcatagag
ccaggccacctcagtctcctgcagagggcctctctgcccatgagacaagg
actttcacccctgtgctaagctggacccaggctcatcgcaggccagcaca
ggtccctgttatcaactctatgcagatcccagaggtgaatgggttctcag
aagtggaagtttgagaacccttgcttccgcagcctcagcctgctccatgt
caggggcccccaatttaagctgtgttctgtcaccccaaagccctgaggca
agaagatggaatacagcctagagtccagcatttttctgccaatgcagctt
cacacaacccagctgctaggtggaacgtggaaccacagccctgatgggtt
gactgcccttcagtgagcaccgtgtatccaacagtctagaagttgaattt
ttacaagaggaatcaaaatttgggtagaaaaggaggaaggaaatatttag
agatgagtggtgaatataataaattattgcacaaaatttctaaagaacta
atgtaacaatatatgcatacatagagttattataacctcaagcatataaa
atctcaaatagtacatgtactgacgactgtactgttatttaaaattagaa
aaatcgataatcaattgagataagtgtcaatctggaacttagcaatctga
atcaccataggacacataaaatgacctctatgaaaatgtgaagaaaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_91751432_91752724
seq2: B6Ng01-084H06.b_46_1293

seq1  GAATTCATAGCAGTTGAGATTGTCTTTGCAAGACAGATGCAGGTTCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGCAGTTGAGATTGTCTTTGCAAGACAGATGCAGGTTCAGGC  50

seq1  CACAAAAATGTCCAGCATGTGAATAAGAAGAAGCTAAAGGCTAATGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAATGTCCAGCATGTGAATAAGAAGAAGCTAAAGGCTAATGATAG  100

seq1  CTACTGGAAGAAAGAAAATTGCTGTTTTGTTGTTGTTGTTGTTTTATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGAAGAAAGAAAATTGCTGTTTTGTTGTTGTTGTTGTTTTATCTG  150

seq1  TGTATGCCCAAGTGGAACTGTGTCACCAGACATAATCTGAGAAGGTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCCCAAGTGGAACTGTGTCACCAGACATAATCTGAGAAGGTTGAA  200

seq1  CAGATTCAGAAAACCCAGTATTCTCATATATGTGACCAGTAGGCATTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCAGAAAACCCAGTATTCTCATATATGTGACCAGTAGGCATTTCA  250

seq1  TCTGCTCCTGATATGGTTCCTGTCCTGGACCACAACAACCCACATGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCCTGATATGGTTCCTGTCCTGGACCACAACAACCCACATGGAGA  300

seq1  TATTGACCACTAGTCAAGTACCACAGAGTTCTCCATGCCAATGAGGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACCACTAGTCAAGTACCACAGAGTTCTCCATGCCAATGAGGTATC  350

seq1  CAGATGGGCTGGTCACAGGGTATAACCAATAAGCTTCCTATCCTGGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGGCTGGTCACAGGGTATAACCAATAAGCTTCCTATCCTGGATAT  400

seq1  CCCTTCCTGCAAATGGTCTATAATCTCTTGTCCACCCCAAGTAAGTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCTGCAAATGGTCTATAATCTCTTGTCCACCCCAAGTAAGTTGTG  450

seq1  TGCACCCATTTTCCATTGTGAACAATGAATAAACTGTTTGGCCAAGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCCATTTTCCATTGTGAACAATGAATAAACTGTTTGGCCAAGCAAA  500

seq1  GACTGTCTCTCTCATCAAGAACCTCTGTGGGGGAAGCCTTCATCATAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCTCTCTCATCAAGAACCTCTGTGGGGGAAGCCTTCATCATAGAG  550

seq1  CCAGGCCACCTCAGTCTCCTGCAGAGGGCCTCTCTGCCCATGAGACAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCACCTCAGTCTCCTGCAGAGGGCCTCTCTGCCCATGAGACAAGG  600

seq1  ACTTTCACCCCTGTGCTAAGCTGGACCCAGGCTCATCGCAGGCCAGCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCACCCCTGTGCTAAGCTGGACCCAGGCTCATCGCAGGCCAGCACA  650

seq1  GGTCCCTGTTATCAACTCTATGCAGATCCCAGAGGTGAATGGGTTCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTGTTATCAACTCTATGCAGATCCCAGAGGTGAATGGGTTCTCAG  700

seq1  AAGTGGAAGTTTGAGAACCCTTGCTTCCGCAGCCTCAGCCTGCTCCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAAGTTTGAGAACCCTTGCTTCCGCAGCCTCAGCCTGCTCCATGT  750

seq1  CAGGGGCCCCCAATTTAAGCTGTGTTCTGTCACCCCAAAGCCCTGAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCCCCCAATTTAAGCTGTGTTCTGTCACCCCAAAGCCCTGAGGCA  800

seq1  AGAAGATGGAATACAGCCTAGAGTCCAGCATTTTTCTGCCAATGCAGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGGAATACAGCCTAGAGTCCAGCATTTTTCTGCCAATGCAGCTT  850

seq1  CACACAACCCAGCTGCTAGGTGGAACGTGGAACCACAGCCCTGATGGGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAACCCAGCTGCTAGGTGGAACGTGGAACCACAGCCCTGATGGGTT  900

seq1  GACTGCCCTTCAGTGAGCACCGTGTATCCAACAGTCTAGAAGTTGAATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCCTTCAGTGAGCACCGTGTATCCAACAGTCTAGAAGTTGAATTT  950

seq1  TTACAAGAGGAATCAAAATTTGGGTAGAAAAGGAAGGGAAGGAAATATTT  1000
      ||||||||||||||||||||||||||||||||||  ||||||||||||||
seq2  TTACAAGAGGAATCAAAATTTGGGTAGAAAAGGA--GGAAGGAAATATTT  998

seq1  AGAGATGAGT-GTGAATATAATTAAAATTTATTTGCACAAAATTTCTAAA  1049
      |||||||||| |||||||||||  |||||   ||||||||||||||||||
seq2  AGAGATGAGTGGTGAATATAAT--AAATT--ATTGCACAAAATTTCTAAA  1044

seq1  GAACTAATGTAAACAATATATGCATACATAGAGTTATTATAACCTCAAGG  1099
      |||||||||| ||||||||||||||||||||||||||||||||||||| |
seq2  GAACTAATGT-AACAATATATGCATACATAGAGTTATTATAACCTCAA-G  1092

seq1  CAATTAATAAAATACTCAAAATAAGTACATGTAACCTGACCAAATTTGTA  1149
      ||    ||||||| ||||||   ||||||||||  ||||| |    ||| 
seq2  CA---TATAAAAT-CTCAAA--TAGTACATGTA--CTGACGA---CTGT-  1130

seq1  ACTGTTATTTAAAATGTAAGAAAAAAATCAGAACCCAAAATCAAAATTTG  1199
      ||||||||||||||  | |||||        || | | ||||||    | 
seq2  ACTGTTATTTAAAA--TTAGAAA--------AATCGATAATCAA----TT  1166

seq1  GAGATAAAGTGTTCTAAATTCTCTGACACATAGATATTTGGAATACCAAA  1249
      ||||| |||||   | ||   ||||  || |||  || || |  ||    
seq2  GAGAT-AAGTG---TCAA---TCTGGAACTTAGCAATCTGAATCAC----  1205

seq1  ACAAAGGAGACTAAAAATGAGCTCATAGAAAATGTGAAGAAAAA  1293
       || |||| ||  ||||||| |||   |||||||||||||||||
seq2  -CATAGGACACATAAAATGACCTCTATGAAAATGTGAAGAAAAA  1248