BAC Information

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BAC

Clone NameB6Ng01-085D23
Chromosome11 (Build37)
Map Location 14,734,815 - 14,735,949
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC432535, 1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673
Downstream geneLOC432537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085D23.bB6Ng01-085D23.g
ACCDH898974DH898975
length1,1821,129
definitionDH898974|Mus musculus domesticus DNA, BAC clone: B6Ng01-085D23, 5' end.DH898975|Mus musculus domesticus DNA, BAC clone: B6Ng01-085D23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagcagtgtatcccatttataataggaatatttagttt
tctggagtcaaacttcttgagttctttatatatatattggatattattcc
cctatcagatttaggattggtaaggatcttttcccagtctgttggttgcc
tttttttcttattgacagtgtcttttccttacaaaagctttgcagcttta
tgagattccatttgttgattcttgatcttagagcacatgccactggtgtt
ctgtacaggaatttttgcctgtgaccctatcttagacgctcttccctatc
ttctcctctataagtttcagtgtttctagttttatgtgtaattctttgat
ccatttatacctgagctttgtgcaaagagataagaatggaccaattcaca
ttcttgttcatgctaacctccacatgagcttgtaacatttgttgaaaatg
ttgtctttttttccactgaatggtttttgctcctttgtcaaagatcaagt
gaacataggtgtgtaggttcatttctgggtattcaattctattccattga
tctacctgtctgtcattgtaccagtaccatacagctttttatgacaattg
ctctgtagtacagctttagattggggattgtgattcccccagaggttctt
ttattgttgagaatagttttggctatcctagggtttttgttattccagaa
gaatttgcaaattatcctttctaactctgtgaataattgagtaaaatttt
gatggggattgcttgaatctgtagattgctttctgcaagatagccatttt
gactatactaatcctgctaatccatgagcatgggagacctttccattttc
tgagatcttcattgatttcttttttcaaagacttgaaattcttgtcatac
caatctttcacttccttagttagagtcacaccaaggtattttttattatt
gtaactattttaaaggtgttgtttccctaatttcattctcagcctgtttt
atccttttgtagaaaaggccactgatttgtttggagtatttccagtactg
cctgtgaagtgtttatcaagatagtgtctcgatggaatttgatcactata
tactatcaatcactgcaaggaatttgagtctccgtctatgaatctgatcc
ttgtgtatgcctgctagacttcagtacctata
gaattctctaaaattattattaataatgtttaagggttaggttggtaagt
ttaaaataaactttttaatactctgattaaggtttttgtggattgccaat
cacttaacaaaaatatttcctaaaatcttaagaaaatattcataaatacc
catattttctgaatagccacattggctttccaaaaataaatagggacctg
agggctgaggtctcatattaaggaaaggacagaactttaaaatgatagct
aaaacaaaaagaaaattattctcttgaattgtcactgttgagaatgctga
tttgtaagaattgaaatccaccaccgcattaaggctaacaaacaaggaag
ctatattaagactggacatcattgctaagtaattttgctttctagagaac
tacacgatgtattcttggacacagcttgtcctgatagcttatagatttta
catattatatgcactcattggaaaaaggcatttaatattagataccatct
accaaaagaataaaataaattaaatatacttgagattgaaccattcttct
tgcagataataagattgcagagataattattttttgagtacaattttcca
atatgaaaataaaccatttatttccaacccgaaaaaacaagctatgaaaa
tttctacataatatcaacagagtattttaaacttatttgaagctgggttt
aaagcaggcataaaccactatgagtggataaattgaagagcagaacaaaa
tgctagctcttcaacttgtatattttaatactattatttctatctccttc
gtatgttttttaataaagactagaaagtttaacctattttttttaaggaa
acaaatatatgggaatattaaagctttctaaagcttctactgtattcatt
gatatcagtggtaaaaatgtaaatgaatgatcgctatctccttaaagatt
ctcaaatggtgatagaagctctcatgtataagaattagcatacatatatt
ttctggcttaatgtagcaacagtgtcccaagaagctgtataccacactat
aaagactgaactagaactatgttaatgcttgttatgcagaaatttcactg
aaacgtgccaacgtggccattctactaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_14734815_14735949
seq2: B6Ng01-085D23.g_68_1196

seq1  GAATTCTCTAAAATTATTATTAATAATGTTTAAGGGTTAGGTTGGTAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAAAATTATTATTAATAATGTTTAAGGGTTAGGTTGGTAAGT  50

seq1  TTAAAATAAACTTTTTAATACTCTGATTAAGGTTTTTGTGGATTGCCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAAACTTTTTAATACTCTGATTAAGGTTTTTGTGGATTGCCAAT  100

seq1  CACTTAACAAAAATATTTCCTAAAATCTTAAGAAAATATTCATAAATACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAACAAAAATATTTCCTAAAATCTTAAGAAAATATTCATAAATACC  150

seq1  CATATTTTCTGAATAGCCACATTGGCTTTCCAAAAATAAATAGGGACCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTCTGAATAGCCACATTGGCTTTCCAAAAATAAATAGGGACCTG  200

seq1  AGGGCTGAGGTCTCATATTAAGGAAAGGACAGAACTTTAAAATGATAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGAGGTCTCATATTAAGGAAAGGACAGAACTTTAAAATGATAGCT  250

seq1  AAAACAAAAAGAAAATTATTCTCTTGAATTGTCACTGTTGAGAATGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAAGAAAATTATTCTCTTGAATTGTCACTGTTGAGAATGCTGA  300

seq1  TTTGTAAGAATTGAAATCCACCACCGCATTAAGGCTAACAAACAAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGAATTGAAATCCACCACCGCATTAAGGCTAACAAACAAGGAAG  350

seq1  CTATATTAAGACTGGACATCATTGCTAAGTAATTTTGCTTTCTAGAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTAAGACTGGACATCATTGCTAAGTAATTTTGCTTTCTAGAGAAC  400

seq1  TACACGATGTATTCTTGGACACAGCTTGTCCTGATAGCTTATAGATTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGATGTATTCTTGGACACAGCTTGTCCTGATAGCTTATAGATTTTA  450

seq1  CATATTATATGCACTCATTGGAAAAAGGCATTTAATATTAGATACCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTATATGCACTCATTGGAAAAAGGCATTTAATATTAGATACCATCT  500

seq1  ACCAAAAGAATAAAATAAATTAAATATACTTGAGATTGAACCATTCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAGAATAAAATAAATTAAATATACTTGAGATTGAACCATTCTTCT  550

seq1  TGCAGATAATAAGATTGCAGAGATAATTATTTTTTGAGTACAATTTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATAATAAGATTGCAGAGATAATTATTTTTTGAGTACAATTTTCCA  600

seq1  ATATGAAAATAAACCATTTATTTCCAACCCGAAAAAACAAGCTATGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAAATAAACCATTTATTTCCAACCCGAAAAAACAAGCTATGAAAA  650

seq1  TTTCTACATAATATCAACAGAGTATTTTAAACTTATTTGAAGCTGGGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACATAATATCAACAGAGTATTTTAAACTTATTTGAAGCTGGGTTT  700

seq1  AAAGCAGGCATAAACCACTATGAGTGGATAAATTGAAGAGCAGAACAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGCATAAACCACTATGAGTGGATAAATTGAAGAGCAGAACAAAA  750

seq1  TGCTAGCTCTTCAACTTGTATATTTTAATACTATTATTTCTATCTCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCTCTTCAACTTGTATATTTTAATACTATTATTTCTATCTCCTTC  800

seq1  GTATGTTTTTTAATAAAGACTAGAAGGTTTAACCTA-TTTTTTTAAGGAA  849
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  GTATGTTTTTTAATAAAGACTAGAAAGTTTAACCTATTTTTTTTAAGGAA  850

seq1  ACAAATATATGGGAATATTAAAGCTTTCTAAAGCTTCTACTGTATTCATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATATGGGAATATTAAAGCTTTCTAAAGCTTCTACTGTATTCATT  900

seq1  GATATCAGTGGTAAAAATGTAAATGAATGATCGCTATCTCCTTAAAGATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCAGTGGTAAAAATGTAAATGAATGATCGCTATCTCCTTAAAGATT  950

seq1  CTCAAATGGTGATAGAAGGCTCTCATGTATTAAGGAATTAGCATACATAT  999
      ||||||||||||||||| ||||||||||||  | ||||||||||||||||
seq2  CTCAAATGGTGATAGAA-GCTCTCATGTAT--AAGAATTAGCATACATAT  997

seq1  A-TTTCT-GCCTAATGTAGCCAACAGTGTCCCCAAGAGCTGTATACACAA  1047
      | ||||| || |||||||| |||||||||||| |  ||||||||||   |
seq2  ATTTTCTGGCTTAATGTAG-CAACAGTGTCCCAAGAAGCTGTATACCACA  1046

seq1  CTAATAAAGACTGAAACTAAGAAACTATGTTAATGCTTGTAATGCAGAAT  1097
      || |||||||||| |||||   |||||||||||||||||| |||||||| 
seq2  CT-ATAAAGACTG-AACTA--GAACTATGTTAATGCTTGTTATGCAGAAA  1092

seq1  TTTCACTGAGACGTGCACAACGTGGGCATTCTACTACA  1135
      ||||||||| |||||| |||||||| ||||||||||||
seq2  TTTCACTGAAACGTGC-CAACGTGGCCATTCTACTACA  1129