BAC Information

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BAC

Clone NameB6Ng01-085H21
Chromosome11 (Build37)
Map Location 15,624,349 - 15,624,699
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041673, LOC432537
Downstream geneLOC665660, Vstm2, Sec61g, Akt2-ps, LOC665689, LOC627583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085H21.bB6Ng01-085H21.g
ACCDH899150DH899151
length1,222967
definitionDH899150|Mus musculus domesticus DNA, BAC clone: B6Ng01-085H21, 5' end.DH899151|Mus musculus domesticus DNA, BAC clone: B6Ng01-085H21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaagtctgataaacagcttcaatgaagtagctggatataaaat
taactcaaacaagtcaatggcctttctctacacaaaggataaacgggctg
agaaagaaattagggaaacaacacccttctcaatagtcacaaataatata
gaataccttggcgtgactctaactaaggaagtgaaagatctgtatgataa
gaacttcatgtctctgaagaaagaaattaaagaagatctcagaagatgga
aagatctcccatgctcatggattgacaggatcaatataataaaaatggct
atcttgccaaaagcaatctacagattcaatgcaatccccatcaaaattcc
aactcaattcttcaacgaattagaaagggcgatcggcagattcatctgga
ataacaaaaaacctaagatagcaaaaactcttctcaaggataaaagaagc
tctggtggaatcaccatgcccgacctaaagctgtactacagagcaattgt
gataaaaactgcatggtactggtatagtgacagacaagtagaccaatgga
acagatgtgaagacccagagatgaacccacacacctatggtcacttgatc
tttgacaagggagctaaaatcatccagtggaaaaaagacagcattttcaa
caaatggtgctggcacaactggttgttatcatggagaagattgcaaattg
atccattactatctccttgtactaaggtcaaatctaagtggattaagaaa
ctccacataaaaccagaaacactgaaacttctagaggagaaagtagggaa
aagactcgaagatatgggtacagggcaaaaattcctgaatagaacagcag
tggcttgtgctgtaagatcgagaattgataattgggacctcataaaattg
caaagcttctgcaaggcaaaagacaccgtcataagacaaaaagaccacca
acagattgggaaaggtctttacctatcccaaatcagataggggactaata
tcatatattataaagaactcaagaggtgactccagagttatcaaataccc
cattaaaatggggcccagactgataagaatccccactggagatacgattg
caggaagcacctgaaatgttcacaatcctaatctcagatgcatccaaaca
cctgaatcctacttcagtcgatgcctgaatcaaactcctaggtgtacacg
gccacatgcctggccgaggagt
gaattccacttcctgcaaaagagaatgcatctgaaatcatggcactatct
ttgcttaataaaaagatgaagtcctctggggaatcatttgttctttggga
ttttctgtactacttgggccattacgtctatgcaaacatgtatgaggagt
aatatttataacaagtactctattagctactatgtaggaaccatggtctc
tgggaagcattctaagttctaagcacccttgatgatatccatacttaagt
tatttatattaagggaatccatctttacaattgggtagaatttctttatt
tcttttttatggattttttaaaatattatttttattagatattgtcttca
tttacatttcaaatgttatcccctttcctagtttcctccccgaaaatccc
ctatcccctctcccatccccctgctccctaactcactcacttctgcttcc
tggccctggcattcccctatactggggcatagaatcttcacaagaccaag
ggcctgtccccccattgatgaccgactaggccatcccctgctacatatgc
agctagagacatgagtcccaccatgtgttttctttgactagtggtttagt
cccagggagctctgggggtactggttagttcatagtgttgttccttataa
gaatctgaagtatgttatactaactggaagccttcccatccatccatcca
accaaccaaccaaccaaagtgaaaaaccaaaccaaaccaacaaagccaaa
aaacaaaagcaggaacctcagaaaaaagggtagatgtaggagccagaggg
gttgaggaaccaggaaaacagggcccacggaatcaactaagcagggctca
caggtgctcacagagatcaaagcaatagttatggaccctgcatgggtttg
tgctggtcctctgcatatatattgtggtcgtttagcttggggttttgtgg
gacttataactatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_15624349_15624699
seq2: B6Ng01-085H21.g_414_712 (reverse)

seq1  AGGAACAACAATATGAACTAACCAGTAACCCCAGAGCTCCCTGGTACTTA  50
      |||||||||| |||||||||||||||| |||||||||||||||| ||| |
seq2  AGGAACAACACTATGAACTAACCAGTACCCCCAGAGCTCCCTGGGACTAA  50

seq1  ACCACCAATCAAAGAAAACAAATGATGGAATTCATGTCTCTAGCTGCATA  100
      ||||| | |||||||||||| ||| ||| | |||||||||||||||||||
seq2  ACCACTAGTCAAAGAAAACACATGGTGGGACTCATGTCTCTAGCTGCATA  100

seq1  TGTAGGAGAGGATGGCCTAGTCAGCCATCAATGGGAGGAGAAGCCCTTGG  150
      ||||| || ||||||||||||| | |||||||||| ||| | ||||||||
seq2  TGTAGCAGGGGATGGCCTAGTCGGTCATCAATGGGGGGACAGGCCCTTGG  150

seq1  TCTTGTGAAGATTCTATGCCCCAATATAGGGGAATGCCAGGGCCAGGAA-  199
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  TCTTGTGAAGATTCTATGCCCCAGTATAGGGGAATGCCAGGGCCAGGAAG  200

seq1  CAGGAGTGGGTAGGTTGGGTAGCAGGGGGA-GGGGGAGGGGGGAGGGGAA  248
      ||| |||| ||  ||| || |||||||||| ||| ||||||  |||||  
seq2  CAGAAGTGAGTGAGTTAGGGAGCAGGGGGATGGGAGAGGGGATAGGGG--  248

seq1  CAGGATATTTTAGAAGAGGAAACTAGGAAAGGGAATTGCATTTGAAATGT  298
            ||||| |  |||||||||||||||||| ||  ||||||||||||
seq2  ------ATTTTCGGGGAGGAAACTAGGAAAGGGGATAACATTTGAAATGT  292

seq1  AAATAAAGAAAATATCTAATAAAAAAGAAAAAAACATTTGAAATGTAAAT  348
      |||| ||                                           
seq2  AAATGAA-------------------------------------------  299

seq1  GAA  351
         
seq2  ---  299