BAC Information

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BAC

Clone NameB6Ng01-085K02
Chromosome11 (Build37)
Map Location 91,495,323 - 91,496,495
singlet/doubletsinglet
Overlap genenone
Upstream geneStxbp4, LOC100039267, Cox11, Tom1l1, LOC638903, EG664976, Kif2b
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085K02.bB6Ng01-085K02.g
ACCDH899255DH899256
length1,1691,234
definitionDH899255|Mus musculus domesticus DNA, BAC clone: B6Ng01-085K02, 5' end.DH899256|Mus musculus domesticus DNA, BAC clone: B6Ng01-085K02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttggatacttaggttcaatagctcaactgatgatagaaggaat
catatcctctgatctgtgtagtgctttgatgttatatatttcagtgagaa
tatctggcttttcaaatgtaaatgcaaatatcttattaaccattttaaaa
agatcatcatttttaaatagatttctcacagataatgaatcttttatgcc
acacagcatttccttcaaaattagaacccagtatttataatgtaagcata
agaagttaccaatatatatttgcaaataataagaaaatctgaaaaatata
ttaaacactcttcttacttgtaattacatatatgttttttgttattagtt
attcatttggccagcattttcacttagtgacggtagaacaattgataata
tactattgatctttttgatattgaaagcatttttattctgtgtaagagta
aatctcagaatcttatcatatttccatacagagtctccatataaagttgc
aatgtgagagcccatgattaaaaatttatttcattttattgccaatgact
tttgcataattaggaattaatttaggtttgtattttatcttagtatattt
cttccatttttaaaaacaatgtaaatgacattatactagaaagtatttct
attatgtttttaatttttattaattctattttttttacaatcccgtcatt
gtccccctctcggtcgaccatctaacagtttcttatcccatttctcttgc
cccatgtctccaagaggatgccctcctgtcaccagctttccccactccct
ggggcctcagtctctccagggctcaagggttaggcacctcttcttccact
gaggtcagaccaggcagtcctctgctgtatatatgctgggggccttcaac
tagctcatgtatgctgcctgggtgatggctcagtcttgagagctctcagg
ggttcagatgagttgagaattctggtctttctaaaggggtcagcctccct
ttcctcagtttcttcccccctctcccttaattctagcaacagtagttccc
atacttcagtccaatggttgggtaaatctgcatctgtctccacctgctgg
tgaacctctcaagaagtatgctagcttggctcgttaggacaccatagcat
cagttaaagttcagcccta
gaattcatctccagcagaaaaacaaggcattaagtgagggatgggtttgc
catcccacagtcaaaactctgacccataatttttttctgtaagaaagaag
tgcaagaatggaattggagaggagcttgaggaaaaggaggtccaacgaca
gacacaaagtgggatccagctcagaggggaggccccaaggccttacacta
ttactgagactatggagtgcttacaaaaagggaactatcttgactgccct
ctgaaagacccaacaagttgctgaaagagtcagatgtagatatttgcacc
caaccaatggacagaagctgctcacacctgtggttgaattagggaagagc
tgaaagaagctgatgagcagggcgaccatataggaggaccagcagtctca
gttaagttgggccccagaattctctcagacactggacaaccaacctggca
acatacaccagctgatatcaggtccccaacacgtatacagcagaggactc
ctggacataggttcattcataaaatatgcacctcaccttcaggagactgg
agaccccacagtatttaaaggtctgttggagtggagggtgttttgccagg
gacatctttgtagagatgggggcaaataggaggtatgggatttggaatag
tccagatggaccaggaggggaataaaatctgaagtgaaaaaaaattcaat
aaaactaaaatttaaaaaaagaaagaaaaaagaaaagaactgtaaaattg
cattcttaaaactaaccaaaaaaaaaaatctttaaactatagttggaagg
tcagagagatagattccaaaactaaattgattttgctactaaagaataag
tagaaatatcaagactaaagtctttcataaagatgaacttcaagacttgt
tgattgggtaagtagatagtatctcagatcctggtcagatgtagacaagt
tctgagaaataggaaataaacactgcttacataggacaggcacactccca
gatttacaagggcttctaggttactcattcaagtgatagacgcatcacag
aaggtgtacattggcagagtaggtatgtatgaaatctggtgcattactgg
gataaggtcatcttaccaagttatagaatccatatgtagataaaaattgg
cttgtgaaagatcgcgacttaccttcctcaatcattcgagagggatggac
tagacactactgagattttgggtgaaagtacgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_91495323_91496495
seq2: B6Ng01-085K02.b_44_1212

seq1  GAATTCCTTGGATACTTAGGTTCAATAGCTCAACTGATGATAGAAGGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGATACTTAGGTTCAATAGCTCAACTGATGATAGAAGGAAT  50

seq1  CATATCCTCTGATCTGTGTAGTGCTTTGATGTTATATATTTCAGTGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCCTCTGATCTGTGTAGTGCTTTGATGTTATATATTTCAGTGAGAA  100

seq1  TATCTGGCTTTTCAAATGTAAATGCAAATATCTTATTAACCATTTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCTTTTCAAATGTAAATGCAAATATCTTATTAACCATTTTAAAA  150

seq1  AGATCATCATTTTTAAATAGATTTCTCACAGATAATGAATCTTTTATGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATCATTTTTAAATAGATTTCTCACAGATAATGAATCTTTTATGCC  200

seq1  ACACAGCATTTCCTTCAAAATTAGAACCCAGTATTTATAATGTAAGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCATTTCCTTCAAAATTAGAACCCAGTATTTATAATGTAAGCATA  250

seq1  AGAAGTTACCAATATATATTTGCAAATAATAAGAAAATCTGAAAAATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTACCAATATATATTTGCAAATAATAAGAAAATCTGAAAAATATA  300

seq1  TTAAACACTCTTCTTACTTGTAATTACATATATGTTTTTTGTTATTAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACACTCTTCTTACTTGTAATTACATATATGTTTTTTGTTATTAGTT  350

seq1  ATTCATTTGGCCAGCATTTTCACTTAGTGACGGTAGAACAATTGATAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTGGCCAGCATTTTCACTTAGTGACGGTAGAACAATTGATAATA  400

seq1  TACTATTGATCTTTTTGATATTGAAAGCATTTTTATTCTGTGTAAGAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTGATCTTTTTGATATTGAAAGCATTTTTATTCTGTGTAAGAGTA  450

seq1  AATCTCAGAATCTTATCATATTTCCATACAGAGTCTCCATATAAAGTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAGAATCTTATCATATTTCCATACAGAGTCTCCATATAAAGTTGC  500

seq1  AATGTGAGAGCCCATGATTAAAAATTTATTTCATTTTATTGCCAATGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAGAGCCCATGATTAAAAATTTATTTCATTTTATTGCCAATGACT  550

seq1  TTTGCATAATTAGGAATTAATTTAGGTTTGTATTTTATCTTAGTATATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATAATTAGGAATTAATTTAGGTTTGTATTTTATCTTAGTATATTT  600

seq1  CTTCCATTTTTAAAAACAATGTAAATGACATTATACTAGAAAGTATTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTTTTAAAAACAATGTAAATGACATTATACTAGAAAGTATTTCT  650

seq1  ATTATGTTTTTAATTTTTATTAATTCTATTTTTTTTACAATCCCGTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTTTTTAATTTTTATTAATTCTATTTTTTTTACAATCCCGTCATT  700

seq1  GTCCCCCTCTCGGTCGACCATCTAACAGTTTCTTATCCCATTTCTCTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCCTCTCGGTCGACCATCTAACAGTTTCTTATCCCATTTCTCTTGC  750

seq1  CCCATGTCTCCAAGAGGATGCCCTCCTGTCACCAGCTTTCCCCACTCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTCTCCAAGAGGATGCCCTCCTGTCACCAGCTTTCCCCACTCCCT  800

seq1  GGGGCCTCAGGTCTCTCCAGGGCTCAAGGGTTAGGCACCTCTTCTTCCAC  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTCA-GTCTCTCCAGGGCTCAAGGGTTAGGCACCTCTTCTTCCAC  849

seq1  TGAGGTCAGACCAGGCAGTCCTCTGCTGTATATATGCTGGGGGCCTTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCAGACCAGGCAGTCCTCTGCTGTATATATGCTGGGGGCCTTCAA  899

seq1  CTAGCTCATGTATGCTGCCTGGTTGATGGCTCAGTCTTTGAGAGCTCTCA  950
      |||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  CTAGCTCATGTATGCTGCCTGGGTGATGGCTCAGTC-TTGAGAGCTCTCA  948

seq1  GGGGTCCAGATGAGTTGAGAATTCTGGTCTTTCT-AAGGGGTCAG-CTCC  998
      ||||| |||||||||||||||||||||||||||| |||||||||| ||||
seq2  GGGGTTCAGATGAGTTGAGAATTCTGGTCTTTCTAAAGGGGTCAGCCTCC  998

seq1  CTTTCCTCAGTTTCTTCCCCCCTCTCCC-TAATTCTAGC-ACAGT-GGTC  1045
      |||||||||||||||||||||||||||| |||||||||| ||||| | ||
seq2  CTTTCCTCAGTTTCTTCCCCCCTCTCCCTTAATTCTAGCAACAGTAGTTC  1048

seq1  CCATACTTCAGTCCAATGGTTGGGTATATCTGCATCTGTCT-CAGCTGCT  1094
      |||||||||||||||||||||||||| |||||||||||||| || |||| 
seq2  CCATACTTCAGTCCAATGGTTGGGTAAATCTGCATCTGTCTCCACCTGC-  1097

seq1  TGTTGAACCTCTCAGAGGACAGTCATGCTAGGCTCCTGTCT-GTAAGCAC  1143
      || ||||||||||| ||   ||| |||||||   | || || || || ||
seq2  TGGTGAACCTCTCA-AG--AAGT-ATGCTAG---CTTGGCTCGTTAGGAC  1140

seq1  ACCATAGCATCAGTAACAGTGTCAGCCCTA  1173
      |||||||||||||| | ||| |||||||||
seq2  ACCATAGCATCAGTTAAAGT-TCAGCCCTA  1169