BAC Information

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BAC

Clone NameB6Ng01-086K22
Chromosome11 (Build37)
Map Location 26,302,565 - 26,303,675
singlet/doubletsinglet
Overlap geneFancl
Upstream gene5730522E02Rik, LOC100042328, LOC100042345
Downstream geneVrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086K22.bB6Ng01-086K22.g
ACCDH900015DH900016
length1,1761,113
definitionDH900015|Mus musculus domesticus DNA, BAC clone: B6Ng01-086K22, 5' end.DH900016|Mus musculus domesticus DNA, BAC clone: B6Ng01-086K22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatttagctctgagccccattttttaatggggctatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataagtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcaacttta
tgaggtcccatttatcgattctcgatcttacagcacaagccattactgtt
ctattcaggaattttttccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctcgttttctgtggagttcattat
tccacttagatttgaccttagtacgaggagataggaatggatgaattcac
aattttctacatgataattcccagttgtgccagcaccatttgttgaaaat
gcccccccccccccactggatggttttagctcccctgtcaaagatcaagt
gaccataggtgtgtgggttcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcgctataccagtactatgcagtttttttttttttatt
ttttatttttttttagtcacaattgctctgtagtagagctttaggtcagg
catggtaattccaccagaggttcttttatccttgagaagaatttttgcta
tcctgttttttttttgttattccagatgaatctgccaattgccctttcta
attcattgaagaattgagttggaattttgatggggattgcattgaatctg
tagattgcttttggcaagatagccattttaactatattgatcctaccaat
ccatgagcatgggagatctttccatcttctgagatctttaatttctttct
tcagagagttgaaattcttatcatacagatctttcccttccttagttaga
gtcatgccaagatattttatattatttgtgactattgagaaagtgtgttc
cctaatttctttctcagcctgctatcctttgtgtacagaaaggtcatgac
tgttgagtattttatatccagcctacctcatgagctgttatcagcctagg
attctgtgaatgcagggtcacttatgtacatacaatcactcgcaaggact
ttcgaactcttctatccaattgcgat
gaattctgacttcaatgtccaccacccataacccaggtctggggagataa
aggcaggaagatctgtggggctcgatggttggccaagttagctgagtcaa
caatcatcgtatcagtgagacacgccatctcaatgataaggtgtaacaca
actgagaaaattgacaattgactatgtccacatccacataaatatatgca
tacgcaaaaccatcaatacacagataaataccatttgaaaagtttcagaa
acaataaagacttattagatataataagtgttagaaaaaattcttaccaa
aatcatcttcaattccatcataaaactcattagatcaggagagtgcttca
ttctctaaattaaaacattttcagataataactcatgaaatggatgttct
agtcattgaatctgaaatgaatgtagacatctaaatctgaaagccattaa
ttaccgaaacatttgtcataatgtctatttctgccgacttcattttgaaa
gagtgactaaaacttctgtctttgatttctattgtgataaacaccttgac
cacaagaaaggtgaggaggagagggtttgtttgagtttacagctagagtc
catcttaaaggctagaaacaccaggcaagagctgaaagcagagatcatag
agaaacactgcttacagtcttgctcccatggccgcctttctcagtttgct
ttcttagaccatccaggaccacgtggccagaggtggtatcacccacagta
ggcaaaagcaatcactagtcaggaaaatgccccacacacttgcctacaga
ccatcgaggaaagcaatttctcaatggcaattgttcttccctataactca
agtttgtgtcaatcaagttgaatacaactagggcaggactactcctatct
gcgtgaaatgtagtgaatcgttaaagacatccttttaaaagtgtgcacat
acatacctccattttcttctctgaaagatctaacaaatgtaggaaagctt
ttattttaaaaggggacgagaagaagcagaaggaaagaagatgcgaatga
aatagaacctacaattaaaatggtacctgggagttagtagattttttttt
aataataaatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26302565_26303675
seq2: B6Ng01-086K22.g_69_1181 (reverse)

seq1  TATATATTATTAATTAAAAAAAAATCTACTAAATCCAAGTTACAATTTTA  50
      ||||| ||||| |||||||||||||||||||| ||| || ||| ||||||
seq2  TATAT-TTATT-ATTAAAAAAAAATCTACTAACTCCCAGGTACCATTTTA  48

seq1  TATGTTATGTTTCTTATTTCATTCGCATC-TCTTT-CTTCTGCCTCTCTC  98
       ||  || |||   ||||||||||||||| ||||| ||||||| |||   
seq2  -ATTGTAGGTT--CTATTTCATTCGCATCTTCTTTCCTTCTGCTTCTTCT  95

seq1  CTTCCCCTTTTAAAAT-AAAGCTTTCCTACATTTGTTAGATCTTTCAGAG  147
      | |||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CGTCCCCTTTTAAAATAAAAGCTTTCCTACATTTGTTAGATCTTTCAGAG  145

seq1  AAG-AAATGGAGGTATGTATGTGCACACTTTT-AAAGGATGTCTTTAACG  195
      ||| |||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGAAAATGGAGGTATGTATGTGCACACTTTTAAAAGGATGTCTTTAACG  195

seq1  ATTCACTACATTTCACGCAGATAGG-GTAGTCCTG-CCTAGTTGTATTCA  243
      ||||||||||||||||||||||||| ||||||||| ||||||||||||||
seq2  ATTCACTACATTTCACGCAGATAGGAGTAGTCCTGCCCTAGTTGTATTCA  245

seq1  ACTTGATTGACACAAACTTGAGTTATAGGGAAGAACAATTGCCATTGAGA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATTGACACAAACTTGAGTTATAGGGAAGAACAATTGCCATTGAGA  295

seq1  AATTGCTTTCCTCGATGGTCTGTAGGCAAGTGTGTGGGGCATTTTCCTGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTTCCTCGATGGTCTGTAGGCAAGTGTGTGGGGCATTTTCCTGA  345

seq1  CTAGTGATTGCTTTTGCCTACTGTGGGTGATACCACCTCTGGCCACGTGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGATTGCTTTTGCCTACTGTGGGTGATACCACCTCTGGCCACGTGG  395

seq1  TCCTGGATGGTCTAAGAAAGCAAACTGAGAAAGGCGGCCATGGGAGCAAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATGGTCTAAGAAAGCAAACTGAGAAAGGCGGCCATGGGAGCAAG  445

seq1  ACTGTAAGCAGTGTTTCTCTATGATCTCTGCTTTCAGCTCTTGCCTGGTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAGCAGTGTTTCTCTATGATCTCTGCTTTCAGCTCTTGCCTGGTG  495

seq1  TTTCTAGCCTTTAAGATGGACTCTAGCTGTAAACTCAAACAAACCCTCTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGCCTTTAAGATGGACTCTAGCTGTAAACTCAAACAAACCCTCTC  545

seq1  CTCCTCACCTTTCTTGTGGTCAAGGTGTTTATCACAATAGAAATCAAAGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCACCTTTCTTGTGGTCAAGGTGTTTATCACAATAGAAATCAAAGA  595

seq1  CAGAAGTTTTAGTCACTCTTTCAAAATGAAGTCGGCAGAAATAGACATTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTTTAGTCACTCTTTCAAAATGAAGTCGGCAGAAATAGACATTA  645

seq1  TGACAAATGTTTCGGTAATTAATGGCTTTCAGATTTAGATGTCTACATTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATGTTTCGGTAATTAATGGCTTTCAGATTTAGATGTCTACATTC  695

seq1  ATTTCAGATTCAATGACTAGAACATCCATTTCATGAGTTATTATCTGAAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGATTCAATGACTAGAACATCCATTTCATGAGTTATTATCTGAAA  745

seq1  ATGTTTTAATTTAGAGAATGAAGCACTCTCCTGATCTAATGAGTTTTATG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTAATTTAGAGAATGAAGCACTCTCCTGATCTAATGAGTTTTATG  795

seq1  ATGGAATTGAAGATGATTTTGGTAAGAATTTTTTCTAACACTTATTATAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATTGAAGATGATTTTGGTAAGAATTTTTTCTAACACTTATTATAT  845

seq1  CTAATAAGTCTTTATTGTTTCTGAAACTTTTCAAATGGTATTTATCTGTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAGTCTTTATTGTTTCTGAAACTTTTCAAATGGTATTTATCTGTG  895

seq1  TATTGATGGTTTTGCGTATGCATATATTTATGTGGATGTGGACATAGTCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATGGTTTTGCGTATGCATATATTTATGTGGATGTGGACATAGTCA  945

seq1  ATTGTCAATTTTCTCAGTTGTGTTACACCTTATCATTGAGATGGCGTGTC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCAATTTTCTCAGTTGTGTTACACCTTATCATTGAGATGGCGTGTC  995

seq1  TCACTGATACGATGATTGTTGACTCAGCTAACTTGGCCAACCATCGAGCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGATACGATGATTGTTGACTCAGCTAACTTGGCCAACCATCGAGCC  1045

seq1  CCACAGATCTTCCTGCCTTTATCTCCCCAGACCTGGGTTATGGGTGGTGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGATCTTCCTGCCTTTATCTCCCCAGACCTGGGTTATGGGTGGTGG  1095

seq1  ACATTGAAGTCAGAATTC  1111
      ||||||||||||||||||
seq2  ACATTGAAGTCAGAATTC  1113