BAC Information

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BAC

Clone NameB6Ng01-087E07
Chromosome11 (Build37)
Map Location 90,869,319 - 90,870,498
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem100, LOC100039104, Mmd, Hlf, Stxbp4, LOC100039267, Cox11, Tom1l1, LOC638903
Downstream geneEG664976, Kif2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087E07.bB6Ng01-087E07.g
ACCDH900443DH900444
length9691,178
definitionDH900443|Mus musculus domesticus DNA, BAC clone: B6Ng01-087E07, 5' end.DH900444|Mus musculus domesticus DNA, BAC clone: B6Ng01-087E07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacagaatttattagctgtcactggtaacattttcaggcatgcc
caaccttttaaacgtgacacgatgttgttatctacaaagtacatgcctga
gaaatacacaatccagttaccagaaagatcacaaaaagtgcctcataatg
ttgtaggtgagtttatacttttgtgtgaagtttcattcacagctgatctg
gtcctcctactgaccaagggccataggtcaaatacacctgctagttcagg
gtttctggagactgcaatttctctaactttttctgttgcctgtatccttc
aggacctgctacaaagtgatgttcacagccctaagctgttgaaatttctg
cagcaactggtaattaacacttgaagatgatgccagcggccagtgatctg
tgcgtttcctttccctgcagttaaaacacatcgaggaaaagctcttcttt
tgacaatttaacatttgggctgagcaatttctgacatttgttttgtgttt
cagggtcgttgatgtgtgtgtgtgtgtggaccctgaaaaactttaagcta
aaaccttgtattccttgaaattccattcagttcaagtctttgaagattat
ttctagtctgttttgagtttcagatgcgtttccacgaacaaaataaaagg
ttcgtgaagtaataccgatacccagctgagcacgtagagactgattagaa
gtcatgacatgctgaaggatgtttccggtcacactgtgtgtgctggggct
aaagtagtcaggttgtaggagaggagaaagcattcggtcttagatgatgc
ctccctctctctctcgggcttccgatgaattatagaagtttgctcttccg
agtctggggtttaaatcgtatcttccaaaatggggcaggaaaatgtgttt
ctgcctcctgcatctaccaattcaccaacaacttcaatatttacctctaa
gtttagatttccagtagag

gaattccattccttttttcaaaaacaagcaacttggagaaggtatttcct
cgtagaagctatattgctacactgagacaagggttggcattttaaaaggt
cagtggttataaggataaagtcttggtatgacagacagcaacagtttgat
tggcagtaaattttgctctctgccaacaatgacaacagtagtaccagaat
tcttgtggaggtcatcatggggtggcagaatatggagcaaaactgtagcc
atcattcctgttggcttaatgatgaattagaatatctagcctacccaatc
tcttgtaaaggacctgctatctttttaacagctccacttttttttttcca
tcaagcatagtcagttttgtttcccatcattcttagatagcaaatttatt
ccaccaaagacataagattcaaggttttgatcactagaggtctctaccaa
gtgtagataatgtgtacccactagaaatgtttcctgtataattatatact
gaaaataaataccaatgcaaaatgagcatgaattattttcataaaataag
tatgacatgtttgtgcatatgttgacattttgaatatttaaaatatattc
tatcacgtaaccctccctaaacagttctgaattaaacagcataaacatta
ttaaaaccatttgtaagtggtgaatgggaagtaatgaagggttcaagaga
ctaagtgatagatttggaacacaacaaagctctagttgtaagagtaatgg
gtctcatgcatatgcattatattgcttgttcatacatttctttcctttcc
tggcataaagttttatctttaaagtttacagggcttctagaaatcaagca
atgatttttacattgcttttgagttctgtgttgaggataaaattcagggt
cttgcaatgctaggcaagcagctgagacacatcactgcctctttgggctt
ctaatgcagtactagggcatgttatcctcaactagcctcaaactcctagt
gatcacccttctgcctccacgtcctgaatgctggatggctgctgtgttca
gccccacccccaactcaactggtgttgttttattgtcttgattgcttcta
agctttgcaacattggaaactgaaatctcccttcaactttgaagcagctg
aaatgcttgctgttctctcattccccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_90869319_90870498
seq2: B6Ng01-087E07.g_69_1246

seq1  GAATTCCATTCCTTTTTTCAGAAACAAGCAACTTGGAGAAGGTATTTCCT  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAATTCCATTCCTTTTTTCAAAAACAAGCAACTTGGAGAAGGTATTTCCT  50

seq1  CGTAGAAGCTATATTGCTACACTGAGACAAGGGTTGGCATTTTAAAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGAAGCTATATTGCTACACTGAGACAAGGGTTGGCATTTTAAAAGGT  100

seq1  CAGTGGTTATAAGGATAAAGTCTTGGTATGACAGACAGCAACAGTTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTTATAAGGATAAAGTCTTGGTATGACAGACAGCAACAGTTTGAT  150

seq1  TGGCAGTAAATTTTGCTCTCTGCCAACAATGACAACAGTAGTACCAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTAAATTTTGCTCTCTGCCAACAATGACAACAGTAGTACCAGAAT  200

seq1  TCTTGTGGAGGTCATCATGGGGTGGCAGAATATGGAGCAAAACTGTAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGGAGGTCATCATGGGGTGGCAGAATATGGAGCAAAACTGTAGCC  250

seq1  ATCATTCCTGTTGGCTTAATGATGAATTAGAATATCTAGCCTACCCAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCCTGTTGGCTTAATGATGAATTAGAATATCTAGCCTACCCAATC  300

seq1  TCTTGTAAAGGACCTGCTATCTTTTTAACAGCTCCACTTTTTTTTTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTAAAGGACCTGCTATCTTTTTAACAGCTCCACTTTTTTTTTTCCA  350

seq1  TCAAGCATAGTCAGTTTTGTTTCCCATCATTCTTAGATAGCAAATTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCATAGTCAGTTTTGTTTCCCATCATTCTTAGATAGCAAATTTATT  400

seq1  CCACCAAAGACATAAGATTCAAGGTTTTGATCACTAGAGGTCTCTACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAAGACATAAGATTCAAGGTTTTGATCACTAGAGGTCTCTACCAA  450

seq1  GTGTAGATAATGTGTACCCACTAGAAATGTTTCCTGTATAATTATATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGATAATGTGTACCCACTAGAAATGTTTCCTGTATAATTATATACT  500

seq1  GAAAATAAATACCAATGCAAAATGAGCATGAATTATTTTCATAAAATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAATACCAATGCAAAATGAGCATGAATTATTTTCATAAAATAAG  550

seq1  TATGACATGTTTGTGCATATGTTGACATTTTGAATATTTAAAATATATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACATGTTTGTGCATATGTTGACATTTTGAATATTTAAAATATATTC  600

seq1  TATCACGTAACCCTCCCTAAACAGTTCTGAATTAAACAGCATAAACATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACGTAACCCTCCCTAAACAGTTCTGAATTAAACAGCATAAACATTA  650

seq1  TTAAAACCATTTGTAAGTGGTGAATGGGAAGTAATGAAGGGTTCAAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCATTTGTAAGTGGTGAATGGGAAGTAATGAAGGGTTCAAGAGA  700

seq1  CTAAGTGATAGATTTGGAACACAACAAAGCTCTAGTTGTAAGAGTAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGATAGATTTGGAACACAACAAAGCTCTAGTTGTAAGAGTAATGG  750

seq1  GTCTCATGCATATGCATTATATTGCTTGTTCATACATTTCTTTCCTTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATGCATATGCATTATATTGCTTGTTCATACATTTCTTTCCTTTCC  800

seq1  TGGCATAAGGTTTTATCTTTAAAGTTTACAGGGCTTCTAGAAATC-AGCA  849
      |||||||| |||||||||||||||||||||||||||||||||||| ||||
seq2  TGGCATAAAGTTTTATCTTTAAAGTTTACAGGGCTTCTAGAAATCAAGCA  850

seq1  ATGATTTTTACATTGCTTTTGAGTTCTGTGTTGAGGATAAAATTCAGGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTTACATTGCTTTTGAGTTCTGTGTTGAGGATAAAATTCAGGGT  900

seq1  CTTGCAAATGCTAGGCAAGCAGCTGAGACACATCACTGCC-CCTTGGGCT  948
      ||||| |||||||||||||||||||||||||||||||||| | |||||||
seq2  CTTGC-AATGCTAGGCAAGCAGCTGAGACACATCACTGCCTCTTTGGGCT  949

seq1  TCTAATGCAGTACTAGGGCATG-TATCCTCAACTAGCCTCAAACTCCTAG  997
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCTAATGCAGTACTAGGGCATGTTATCCTCAACTAGCCTCAAACTCCTAG  999

seq1  TGATCACCCTTCTGCCTCCACGTCCTGAATGCTGGATGGCTGCTGTGTTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACCCTTCTGCCTCCACGTCCTGAATGCTGGATGGCTGCTGTGTTC  1049

seq1  AGCCACACCCCC-ACTCACCT-GTGTTGTTTTATTGTCTTGATTGC-TCT  1094
      |||| ||||||| ||||| || |||||||||||||||||||||||| |||
seq2  AGCCCCACCCCCAACTCAACTGGTGTTGTTTTATTGTCTTGATTGCTTCT  1099

seq1  AAGCTTGGCAAACATT-GAAACTGAGAATCTCCCCTATTCAAACTTTGAT  1143
      |||||| || |||||| |||||||| ||||||||   ||| |||||||| 
seq2  AAGCTTTGC-AACATTGGAAACTGA-AATCTCCC---TTC-AACTTTGAA  1143

seq1  GCAGCTGATATTGCTTGCTGTTCTCCTCATTCTCCCA  1180
      |||||||| | ||||||||||||| ||||||| ||||
seq2  GCAGCTGA-AATGCTTGCTGTTCT-CTCATTCCCCCA  1178


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