MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-091H10
Chromosome	11 (Build37)
Map Location	9,299,750 - 9,300,881
singlet/doublet	singlet
Overlap gene	Abca13
Upstream gene	LOC665380, Tns3, LOC638720, Pkd1l1, LOC624800, Hus1, Sunc1, OTTMUSG00000005148, Upp1, LOC626887, LOC100041469
Downstream gene	LOC665435, LOC382483
Link	Open Mouse BAC browser

no map image available.

Click to get alignment info.

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-091H10.b	B6Ng01-091H10.g
ACC	DH903481	DH903482
length	1,231	1,121
definition	DH903481\|Mus musculus domesticus DNA, BAC clone: B6Ng01-091H10, 5' end.	DH903482\|Mus musculus domesticus DNA, BAC clone: B6Ng01-091H10, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	atcaacaataggaatctctaatattggactaaatattagaccagtccaag attgagttagaataactggtcacattgaagaaaagagaaaaatcattatg aatctattaaataactaatcttactaagtcttaaagcaagacagcttcac tagtacaaactggaaaaatggcaagcaaggatgggtcgaacacatgtacc caatttagcttccttgtcacttcagtcagggcactgagccaactcacctg ccagcttgtcacacgaattagccatcatgcttccgtagcattctgtggag agaatctatgttttcccttccctaataaggtagctgtttaggatcaagcc ataagccaataagtagatccttttaagatactataaagcatcattaaatt ctttgacatctaaatttcaaaattctaaaataaaagtatgatttaaatag tgtgcacgggaatgcactaaatagtatgcacggggatataatttccccct tctttgtcttttaagaagttaaagttttaaagttttacaatatcttgtct ttagaataaataactgttgacaaaacatttcaaatacttggctatagtca tgtaataagggcagtgactaattgcactttcaattgtttctcttaaggag cggttgtagctagaaagcttgaaaagttattaatagtcacatgtgcataa tttatttatttgttaactagaaataagagtatttatttgcagcaatttat taagtaaaagtcctcaagaattaacactattatgtggaaacaaatagtaa ctgaggacactaagaggaaagagttatacatgcacaattttcaagaatac taaaatattatcttaaaccataactgtttttgaatatacaaagaacgagg ttatatatccaatctatctatatgtacgacctatagactgcctgagatat aaatctagcctggcattgttttaagatgtctaggcaatctagaacaattt attaaatgtctaaaactgcttcttaaaaggagagcattttttctatgagt tgttactcataagcattgcaaatttgagatatgcatctgagggacgacaa tcttagcatgtggagttctctaactgtcgcctgcacctgcatgcggatcc tggaaagactctgattaccgtgctgatccgactctgaatgagtgtactga gtcaggcatcctggatggtgacctggccggc	gaattccatgatgaaaagagaattttctaaaaagcctttctggcttggga ggttttttgtttgtttggtttggtttggtttggttttttagaatttcata tgactactttatctacataattactcccaccccttccccccttcaattct tcttgtgtcccaccaagtccctctaaaattcttatttaattgttgttaca cacacattcacacacaaacttgacacagactgacaaatatatataaatac agcttattgagtctatttagttttgctcatatgtatatatgtttagtgct gactattcaggatcaaaaaaacctactagagacaatttctctctcccagc agttattaacagcttgtcactcttcacctaagggtggctaagggtggagc cttgtgagatttcttctggctaccatctcacgtcaactgcaagtgtcatt tgttgtgtcttgtttaggcaatcatattgttgaaatttcaggtacagctt cactgtcatacggacaccatctcacagcagacttcctgatcctctgcttc ttacaatctttccaatccctcttgcccagtgtttcctaagccttagatgt tgccttgtagatggctctacaagagacagggcatcatatggtttcctata ccttaaccaattgtaggtttctaaatacttcttagaaatccagggactca aaatgttcctcagctcctctcaaagtgattcttgtcacccctccaaacag attgttatttcaggacatgggctggcccattggaagaggggatgcaaact ggtagatacaacttgaggaacctgatctgatattgatatgttgactcttc ttgacacagactgacttttctactatgtgtcagtacagtgtctgccagac aacagtcaagaaagaatctgttgctgtcttctaatatttatactgcagac tgaaagcagtctactctttttcagtgcatacatttcaatgaatgagtgat tctgacactgctaccgaaaggatctttctacttaagtgatgtactcatga tgcttcaggaaaaatgcttatttttactttccaaatagcttcgaaatcta tttctttcaggcatgaacaaa
quality values	Open. 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Alignment Information

BAC End 1	BAC End 2
	seq1: chr11_9299750_9300881 seq2: B6Ng01-091H10.g_68_1188 (reverse) seq1 TTTGTTTCATGCATGGAAAGAAATAGATTTCTGGAGCTATTTGTGAAGTT 50 \|\|\|\| \|\|\|\|\|\|\| \| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \| \|\|\|\|\|\|\|\|\| \|\|\| \| seq2 TTTG-TTCATGCCT-GAAAGAAATAGATTTC-GAAGCTATTTG-GAAAGT 46 seq1 AAAAATAAGCATTTTTCTTGAAGCATCATGAGTTACATCACATTAAGTGG 100 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\| \|\|\|\|\|\| \| seq2 AAAAATAAGCATTTTTCCTGAAGCATCATGAG-TACATCAC-TTAAGTAG 94 seq1 AAAGATCTCTCCGTTAGCAGTGTCAGAATCACTCATCCATTTGAAATGTA 150 \|\|\|\|\|\|\| \| \|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\| \|\|\|\|\|\|\|\|\|\| seq2 AAAGATCCTTTCGGTAGCAGTGTCAGAATCACTCATTCA-TTGAAATGTA 143 seq1 TGCACTGAAAAAGAGTTAGACTGCTTTCAAGTCTGCAGTATAAAATATGT 200 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\| \| seq2 TGCACTGAAAAAGAG-TAGACTGCTTTC-AGTCTGCAGTAT-AAATAT-T 189 seq1 AGAAGACAGCAACAGATTCTTTCTTGACTGTTGTCTGGCAGACACTGTAC 250 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AGAAGACAGCAACAGATTCTTTCTTGACTGTTGTCTGGCAGACACTGTA- 238 seq1 CTGACACATAGTAGAAAAGTCAGTCTGTGTCAAG-AGAGTCAACATATCA 299 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CTGACACATAGTAGAAAAGTCAGTCTGTGTCAAGAAGAGTCAACATATCA 288 seq1 ATATCAGATCAGGTTCCTCAAGTTGTATCTACCAGTTTGCATCCCCTCTT 349 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ATATCAGATCAGGTTCCTCAAGTTGTATCTACCAGTTTGCATCCCCTCTT 338 seq1 CCAATGGGCCAGCCCATGTCCTGAAATAACAATCTGTTTGGAGGGGTGAC 399 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CCAATGGGCCAGCCCATGTCCTGAAATAACAATCTGTTTGGAGGGGTGAC 388 seq1 AAGAATCACTTTGAGAGGAGCTGAGGAACATTTTGAGTCCCTGGATTTCT 449 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AAGAATCACTTTGAGAGGAGCTGAGGAACATTTTGAGTCCCTGGATTTCT 438 seq1 AAGAAGTATTTAGAAACCTACAATTGGTTAAGGTATAGGAAACCATATGA 499 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AAGAAGTATTTAGAAACCTACAATTGGTTAAGGTATAGGAAACCATATGA 488 seq1 TGCCCTGTCTCTTGTAGAGCCATCTACAAGGCAACATCTAAGGCTTAGGA 549 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TGCCCTGTCTCTTGTAGAGCCATCTACAAGGCAACATCTAAGGCTTAGGA 538 seq1 AACACTGGGCAAGAGGGATTGGAAAGATTGTAAGAAGCAGAGGATCAGGA 599 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AACACTGGGCAAGAGGGATTGGAAAGATTGTAAGAAGCAGAGGATCAGGA 588 seq1 AGTCTGCTGTGAGATGGTGTCCGTATGACAGTGAAGCTGTACCTGAAATT 649 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AGTCTGCTGTGAGATGGTGTCCGTATGACAGTGAAGCTGTACCTGAAATT 638 seq1 TCAACAATATGATTGCCTAAACAAGACACAACAAATGACACTTGCAGTTG 699 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TCAACAATATGATTGCCTAAACAAGACACAACAAATGACACTTGCAGTTG 688 seq1 ACGTGAGATGGTAGCCAGAAGAAATCTCACAAGGCTCCACCCTTAGCCAC 749 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ACGTGAGATGGTAGCCAGAAGAAATCTCACAAGGCTCCACCCTTAGCCAC 738 seq1 CCTTAGGTGAAGAGTGACAAGCTGTTAATAACTGCTGGGAGAGAGAAATT 799 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CCTTAGGTGAAGAGTGACAAGCTGTTAATAACTGCTGGGAGAGAGAAATT 788 seq1 GTCTCTAGTAGGTTTTTTTGATCCTGAATAGTCAGCACTAAACATATATA 849 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GTCTCTAGTAGGTTTTTTTGATCCTGAATAGTCAGCACTAAACATATATA 838 seq1 CATATGAGCAAAACTAAATAGACTCAATAAGCTGTATTTATATATATTTG 899 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CATATGAGCAAAACTAAATAGACTCAATAAGCTGTATTTATATATATTTG 888 seq1 TCAGTCTGTGTCAAGTTTGTGTGTGAATGTGTGTGTAACAACAATTAAAT 949 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TCAGTCTGTGTCAAGTTTGTGTGTGAATGTGTGTGTAACAACAATTAAAT 938 seq1 AAGAATTTTAGAGGGACTTGGTGGGACACAAGAAGAATTGAAGGGGGGAA 999 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AAGAATTTTAGAGGGACTTGGTGGGACACAAGAAGAATTGAAGGGGGGAA 988 seq1 GGGGTGGGAGTAATTATGTAGATAAAGTAGTCATATGAAATTCTAAAAAA 1049 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GGGGTGGGAGTAATTATGTAGATAAAGTAGTCATATGAAATTCTAAAAAA 1038 seq1 CCAAACCAAACCAAACCAAACAAACAAAAAACCTCCCAAGCCAGAAAGGC 1099 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CCAAACCAAACCAAACCAAACAAACAAAAAACCTCCCAAGCCAGAAAGGC 1088 seq1 TTTTTAGAAAATTCTCTTTTCATCATGGAATTC 1132 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TTTTTAGAAAATTCTCTTTTCATCATGGAATTC 1121

BAC End 1

BAC End 2

seq1: chr11_9299750_9300881
seq2: B6Ng01-091H10.g_68_1188 (reverse)

seq1  TTTGTTTCATGCATGGAAAGAAATAGATTTCTGGAGCTATTTGTGAAGTT  50
      |||| ||||||| | |||||||||||||||| | ||||||||| |||  |
seq2  TTTG-TTCATGCCT-GAAAGAAATAGATTTC-GAAGCTATTTG-GAAAGT  46

seq1  AAAAATAAGCATTTTTCTTGAAGCATCATGAGTTACATCACATTAAGTGG  100
      ||||||||||||||||| |||||||||||||| |||||||| |||||| |
seq2  AAAAATAAGCATTTTTCCTGAAGCATCATGAG-TACATCAC-TTAAGTAG  94

seq1  AAAGATCTCTCCGTTAGCAGTGTCAGAATCACTCATCCATTTGAAATGTA  150
      |||||||  | || |||||||||||||||||||||| || ||||||||||
seq2  AAAGATCCTTTCGGTAGCAGTGTCAGAATCACTCATTCA-TTGAAATGTA  143

seq1  TGCACTGAAAAAGAGTTAGACTGCTTTCAAGTCTGCAGTATAAAATATGT  200
      ||||||||||||||| |||||||||||| |||||||||||| |||||| |
seq2  TGCACTGAAAAAGAG-TAGACTGCTTTC-AGTCTGCAGTAT-AAATAT-T  189

seq1  AGAAGACAGCAACAGATTCTTTCTTGACTGTTGTCTGGCAGACACTGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAAGACAGCAACAGATTCTTTCTTGACTGTTGTCTGGCAGACACTGTA-  238

seq1  CTGACACATAGTAGAAAAGTCAGTCTGTGTCAAG-AGAGTCAACATATCA  299
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTGACACATAGTAGAAAAGTCAGTCTGTGTCAAGAAGAGTCAACATATCA  288

seq1  ATATCAGATCAGGTTCCTCAAGTTGTATCTACCAGTTTGCATCCCCTCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGATCAGGTTCCTCAAGTTGTATCTACCAGTTTGCATCCCCTCTT  338

seq1  CCAATGGGCCAGCCCATGTCCTGAAATAACAATCTGTTTGGAGGGGTGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGGCCAGCCCATGTCCTGAAATAACAATCTGTTTGGAGGGGTGAC  388

seq1  AAGAATCACTTTGAGAGGAGCTGAGGAACATTTTGAGTCCCTGGATTTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCACTTTGAGAGGAGCTGAGGAACATTTTGAGTCCCTGGATTTCT  438

seq1  AAGAAGTATTTAGAAACCTACAATTGGTTAAGGTATAGGAAACCATATGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTATTTAGAAACCTACAATTGGTTAAGGTATAGGAAACCATATGA  488

seq1  TGCCCTGTCTCTTGTAGAGCCATCTACAAGGCAACATCTAAGGCTTAGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGTCTCTTGTAGAGCCATCTACAAGGCAACATCTAAGGCTTAGGA  538

seq1  AACACTGGGCAAGAGGGATTGGAAAGATTGTAAGAAGCAGAGGATCAGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGGGCAAGAGGGATTGGAAAGATTGTAAGAAGCAGAGGATCAGGA  588

seq1  AGTCTGCTGTGAGATGGTGTCCGTATGACAGTGAAGCTGTACCTGAAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCTGTGAGATGGTGTCCGTATGACAGTGAAGCTGTACCTGAAATT  638

seq1  TCAACAATATGATTGCCTAAACAAGACACAACAAATGACACTTGCAGTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAATATGATTGCCTAAACAAGACACAACAAATGACACTTGCAGTTG  688

seq1  ACGTGAGATGGTAGCCAGAAGAAATCTCACAAGGCTCCACCCTTAGCCAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGAGATGGTAGCCAGAAGAAATCTCACAAGGCTCCACCCTTAGCCAC  738

seq1  CCTTAGGTGAAGAGTGACAAGCTGTTAATAACTGCTGGGAGAGAGAAATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGGTGAAGAGTGACAAGCTGTTAATAACTGCTGGGAGAGAGAAATT  788

seq1  GTCTCTAGTAGGTTTTTTTGATCCTGAATAGTCAGCACTAAACATATATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAGTAGGTTTTTTTGATCCTGAATAGTCAGCACTAAACATATATA  838

seq1  CATATGAGCAAAACTAAATAGACTCAATAAGCTGTATTTATATATATTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAGCAAAACTAAATAGACTCAATAAGCTGTATTTATATATATTTG  888

seq1  TCAGTCTGTGTCAAGTTTGTGTGTGAATGTGTGTGTAACAACAATTAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTGTGTCAAGTTTGTGTGTGAATGTGTGTGTAACAACAATTAAAT  938

seq1  AAGAATTTTAGAGGGACTTGGTGGGACACAAGAAGAATTGAAGGGGGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTTAGAGGGACTTGGTGGGACACAAGAAGAATTGAAGGGGGGAA  988

seq1  GGGGTGGGAGTAATTATGTAGATAAAGTAGTCATATGAAATTCTAAAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGAGTAATTATGTAGATAAAGTAGTCATATGAAATTCTAAAAAA  1038

seq1  CCAAACCAAACCAAACCAAACAAACAAAAAACCTCCCAAGCCAGAAAGGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAAACCAAACCAAACAAACAAAAAACCTCCCAAGCCAGAAAGGC  1088

seq1  TTTTTAGAAAATTCTCTTTTCATCATGGAATTC  1132
      |||||||||||||||||||||||||||||||||
seq2  TTTTTAGAAAATTCTCTTTTCATCATGGAATTC  1121

BAC Information

Search Parameter

Search Result

BAC

no map image available.

BAC End Information

Alignment Information