BAC Information

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BAC

Clone NameB6Ng01-091M18
Chromosome11 (Build37)
Map Location 19,482,121 - 19,483,272
singlet/doubletsinglet
Overlap genenone
Upstream geneMeis1, LOC635455
Downstream geneLOC100042708, Glns-ps1, LOC665868, LOC100041937, Spred2, Actr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492, Sertad2, LOC665953
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091M18.bB6Ng01-091M18.g
ACCDH903728DH903729
length1,1811,145
definitionDH903728|Mus musculus domesticus DNA, BAC clone: B6Ng01-091M18, 5' end.DH903729|Mus musculus domesticus DNA, BAC clone: B6Ng01-091M18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcactaacgacatgcacctcttggtctaccttatatttcatag
ttgagctacatttgataggactcaatagagagaaacacaccaaaaaactt
caagtggtgtgctgcagtttcttgccgcttctgcagactcgggctgattg
gcagaatgctgtcagctgaggcaagacccatggatgacacttgatgtttg
gagggatataaataggactcaagggacagtgacggaggctgggagcttgg
cttgcttatagagctagctgtgcaatgcttgctggtctctcatcttcgct
gagagaggcacagctgaggacttttcctggtattcctgttggctctagtc
cctgctgactcatgttgaggctgaggcctggctgtctctgctaggtcatg
ccaccacggttgatttatatttgctgtcccaacactaccaaactggactc
ctggtgtatacatgaagtgttttcaggtggttcaacctgctgctgctgct
gctgacctgtgaagtgaactgcttatttccagataacaaacataggaatt
gctccaaagaactatttcttttttttttttttttgtaattttttattagg
tattttcctcatttacatttccaatgctatcacaaaagtcccccatacac
cccccccactcccctacccacccactcccactttttggccctggcgttcc
cctgtactggggcatataaagtttgaaagtccaatgggcctctctttcca
gtgatggccgactaggccatcttttgatacatatgcagctagagtcaaga
gctccggggtactggttagttcataatgttgttctacctatagggttgca
gattcctttagctccttgggtactttctctagctcctccattggagccct
gtgatccatccatagctgactgtgacatcacagttccacttccccatatc
ttttctttcactacctctgtgggctaaaaggaggtaagcatttaggacca
ccactaagtgacttgaaaaataagctgaagaaagaatggaagaagtgggt
gtatggtggctccaaattgacttcttaacttcctaaattaatctcacaag
ttgcaatgaaccaagatgatccaaagaacttgctaagattacaggctgga
atgagtgtcgctacatcgactattcaggagc
gaattctgggaaatggaggaatgagaaattaaaagctgtgatatagtttc
acattcccgaggaaatccattgatcataattagcacggaagctaaatcag
aaagaatgagtagattctaaagtacacgtgtaacatcatagttacggata
atgccttttcttcttggttaatggatatatgattggttctcaaatgctgc
tcagctgatattagaaatgggtttcccttaaaagcccgcttctaagcttt
cagagcagcaaggcattacagttttctttaaaagtgacagagacgcaatg
cgcgtgctgtcaacttaagcaggtactagaacagacagccgcagggtgaa
gggcaaaggtcaaacaatcagaagtggctatctattgtggagatcatcaa
acaggcatgccatcaatggacttgggcgagaacgttggaaattaatcagc
tcagccttcggtgtttagccaggctgattatatatgccctggaacgtgaa
catgtgatgacaggctgagaaactggagcaatcggagtccattctcaaca
aaggctggaaagacagatcaatttgcaatattcttttctgcacccatgca
acaaagcagaaacatgaaagcacaccactaagggatggatgctctctatg
agccaagtgaatcaataacatcagtggcgaagaaaaaagtttctcattct
ctactaccccgagggctttcccatctcaggaactgatgagcggtggtggc
ctctgtcatgtccccttcacctatgtggtgtcatctcctgccacctcaag
gagaatgttgctaagcattgaccaaaaggaggattctgtaggaggagtta
gaaaatcacagtctcttgttgggaagtgcgctgtgcctccaagagggagg
tggacagctgagtcgtggggggtttcaagggctgacacaagccagagtca
aagcactggtaagatagtgggtctctcgtctcccagcacacaaagcccca
ggctgtgcttccctgctgtaagtgggaagactgcactatattcagggtcc
tctatttacaagaactcaggctattctgtggaacgatgaaaagagttacc
gacaaggaaagcctgggagacatgtagagaaaagagaatatgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_19482121_19483272
seq2: B6Ng01-091M18.g_67_1211 (reverse)

seq1  CAGCATATTCTTCTTTCTCTACATTGCTTCCCAGCTTTCCTTTGTCTGCT  50
      |||||||||||  |||||||||||  || ||  ||||||| ||||| | |
seq2  CAGCATATTCTCTTTTCTCTACATGTCTCCCAGGCTTTCC-TTGTC-GGT  48

seq1  GACTCTTTTTCATCTGTCCACAG-ATAGCCTGAG-TCTTGTAAAATAGAG  98
       |||| ||||||||  ||||||| |||||||||| |||||| ||||||||
seq2  AACTC-TTTTCATCGTTCCACAGAATAGCCTGAGTTCTTGT-AAATAGAG  96

seq1  GACCCTGAATATAGTGCAGTCTTTCCCACTTTACAGCAGGG-AGCACAGC  147
      ||||||||||||||||||||| ||||||| ||||||||||| ||||||||
seq2  GACCCTGAATATAGTGCAGTC-TTCCCAC-TTACAGCAGGGAAGCACAGC  144

seq1  CTGGGGCTTTTGGTGTGCTTGGGAGACGAGGAGACCCACTATCTTA-CAG  196
      ||||||||||  |||||| |||||||||| |||||||||||||||| |||
seq2  CTGGGGCTTT--GTGTGC-TGGGAGACGA-GAGACCCACTATCTTACCAG  190

seq1  TGCTTTGACTCTGCCTTGTTGTCAGCCCTTGAAA-CCCCCACGACTCAGC  245
      ||||||||||||| |||| ||||||||||||||| |||||||||||||||
seq2  TGCTTTGACTCTGGCTTG-TGTCAGCCCTTGAAACCCCCCACGACTCAGC  239

seq1  TGTCCACCTCCCTCTTGGAGGCACAGCGCACCTTCCCAACAAGAGACTGT  295
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGTCCACCTCCCTCTTGGAGGCACAGCGCA-CTTCCCAACAAGAGACTGT  288

seq1  GATTTTCTAACTCCTCCTACAGAATCCTCCTTTTGGTCAATGCTTAGCAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTAACTCCTCCTACAGAATCCTCCTTTTGGTCAATGCTTAGCAA  338

seq1  CATTCTCCTTGAGGTGGCAGGAGATGACACCACATAGGTGAAGGGGACAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCCTTGAGGTGGCAGGAGATGACACCACATAGGTGAAGGGGACAT  388

seq1  GACAGAGGCCACCACCGCTCATCAGTTCCTGAGATGGGAAAGCCCTCGGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGCCACCACCGCTCATCAGTTCCTGAGATGGGAAAGCCCTCGGG  438

seq1  GTAGTAGAGAATGAGAAACTTTTTTCTTCGCCACTGATGTTATTGATTCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGAGAATGAGAAACTTTTTTCTTCGCCACTGATGTTATTGATTCA  488

seq1  CTTGGCTCATAGAGAGCATCCATCCCTTAGTGGTGTGCTTTCATGTTTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCATAGAGAGCATCCATCCCTTAGTGGTGTGCTTTCATGTTTCT  538

seq1  GCTTTGTTGCATGGGTGCAGAAAAGAATATTGCAAATTGATCTGTCTTTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTGCATGGGTGCAGAAAAGAATATTGCAAATTGATCTGTCTTTC  588

seq1  CAGCCTTTGTTGAGAATGGACTCCGATTGCTCCAGTTTCTCAGCCTGTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTGTTGAGAATGGACTCCGATTGCTCCAGTTTCTCAGCCTGTCA  638

seq1  TCACATGTTCACGTTCCAGGGCATATATAATCAGCCTGGCTAAACACCGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGTTCACGTTCCAGGGCATATATAATCAGCCTGGCTAAACACCGA  688

seq1  AGGCTGAGCTGATTAATTTCCAACGTTCTCGCCCAAGTCCATTGATGGCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGCTGATTAATTTCCAACGTTCTCGCCCAAGTCCATTGATGGCA  738

seq1  TGCCTGTTTGATGATCTCCACAATAGATAGCCACTTCTGATTGTTTGACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTTGATGATCTCCACAATAGATAGCCACTTCTGATTGTTTGACC  788

seq1  TTTGCCCTTCACCCTGCGGCTGTCTGTTCTAGTACCTGCTTAAGTTGACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCTTCACCCTGCGGCTGTCTGTTCTAGTACCTGCTTAAGTTGACA  838

seq1  GCACGCGCATTGCGTCTCTGTCACTTTTAAAGAAAACTGTAATGCCTTGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCGCATTGCGTCTCTGTCACTTTTAAAGAAAACTGTAATGCCTTGC  888

seq1  TGCTCTGAAAGCTTAGAAGCGGGCTTTTAAGGGAAACCCATTTCTAATAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGAAAGCTTAGAAGCGGGCTTTTAAGGGAAACCCATTTCTAATAT  938

seq1  CAGCTGAGCAGCATTTGAGAACCAATCATATATCCATTAACCAAGAAGAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGAGCAGCATTTGAGAACCAATCATATATCCATTAACCAAGAAGAA  988

seq1  AAGGCATTATCCGTAACTATGATGTTACACGTGTACTTTAGAATCTACTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTATCCGTAACTATGATGTTACACGTGTACTTTAGAATCTACTC  1038

seq1  ATTCTTTCTGATTTAGCTTCCGTGCTAATTATGATCAATGGATTTCCTCG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTCTGATTTAGCTTCCGTGCTAATTATGATCAATGGATTTCCTCG  1088

seq1  GGAATGTGAAACTATATCACAGCTTTTAATTTCTCATTCCTCCATTTCCC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTGAAACTATATCACAGCTTTTAATTTCTCATTCCTCCATTTCCC  1138

seq1  AGAATTC  1152
      |||||||
seq2  AGAATTC  1145