BAC Information

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BAC

Clone NameB6Ng01-093E11
Chromosome11 (Build37)
Map Location 43,647,893 - 43,797,057
singlet/doubletdoublet
Overlap geneAdra1b
Upstream geneAtp10b, EG544767, Pttg1, Slu7, LOC100039392, C1qtnf2, Ccnjl, Fabp6, LOC620562, 4631424J17Rik, Ttc1
Downstream geneIl12b, Ublcp1, 3732413I11Rik, Ebf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093E11.bB6Ng01-093E11.g
ACCDH904810DH904811
length1,147830
definitionDH904810|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E11, 5' end.DH904811|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,647,893 - 43,649,045)(43,796,228 - 43,797,057)
sequence
gaattccatcttgcctgggtttggcgtcttatcgctgaaggtgagggtca
gctataattaaattctgaacatttcataaattgccagagttgggagcatt
ttgggggtgaaaacggaaaatatttcgctttgaaatcccaagcttcagaa
acttaaaggcccatggaagctgtgtggctgtaggatgctcctattatctg
gtaagaacgacagtgcagaaaggggagagccagcagggagggaggagagg
aagaccgcagcctctgcaaggctgagaaacgtggtccctgcaaatattga
atgaacactgcctttctctgtaggagccgcctctctgcttccccaatgcc
gcgtctgcagtaactacaaactatttggtattctgtgttagtgacgctgc
cttctcagatacatcgttactaccgaaataacactggcgagatgttggag
cccagtgtcctttttaattattaaactgaggccagtgactgagtcattcc
acatcccagattctccttccgtgcttctatttcaagtgcctagtatctta
gcttttttttcaccaacacctgagttggttcttagccagttccccaatct
gcaaagcccttgcagaacaaatagtattatccagtctccaaacacacact
gatggcataaaaataaccaaacccacacaaaaactttggtgtgagatcat
caggaaaaccaatgtaggtctacctcccctctgccagcccccaacttacc
aagtgggagagcgatgaagaaggggagccaacataagatgaacattccga
ctacaatgcccaaggttttggctgctttcttttccctggagaacttaaaa
agtttgacagctatggaactcctggggtttgtggcccttggccttggtac
tgctgagggtgtcctcatgaaagttcttagagtggattctcaggtcagct
ctttggagttggacatttccttcatgactccgccttcagattcttggtgg
tcttcttggccacgatgtagactcgtagtacatgaccaggatgaccgcct
attgggatgagaaggagccccagggagtaaaaaagcctaaaagggtctct
gtatacctacattctttgttgccattgggccctggtctttccatcca
gaattccatctaaagcctgaatccttatggacaggcctgagcctgtccca
aggacagaagacagaataaggaaaaagatctgggtgacaagacaaaacta
agaatttgacactgctcagcagtagctcatctggtccatgtgtcatatta
gagaagaaaagctgcccattgtgcagtcggccccagacataaggaactgc
ctacataaggcccacagagcatgccaagggaagccttcatttgcagaagc
tgtgaaatgggcttttactgcaataatgcaatgctgtatctgagtaattg
cccttaaattttaatctaaataacagcatctcatctttgcttccattctc
tgatgacataggatggggagtaatactcttacaaccatacaaaaaattca
tgttgtccctgaacccagaaaacagtgctccctgcccagacagacagacc
cctgctttcctgtttccccagagctaccacgtcagatgactccagtccat
cggcatggcaaagggtctcaagaagaccgtaaatgtattggcccatgagc
tcggttccttcccagcaaagagatctctaatgggagactacaatgggatt
cccatgaaaataaatttttcatctccctaaggacagcacaacaatttccc
atttacagtgttgtcctaataaatataaaggaagtcataattcactgtta
ttatttaaaatagtcctcacttttattactcctcttttgagcaggatgtt
tttattaagtagtagctggctttcacagagtccgatgctggtataaggta
tgtgctaacttgagtgggaggtgtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_43647893_43649045
seq2: B6Ng01-093E11.b_45_1191

seq1  GAATTCCATCTTGCCTGGGTTTGGCGTCTTATCGCTGAAGGTGAGGGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTTGCCTGGGTTTGGCGTCTTATCGCTGAAGGTGAGGGTCA  50

seq1  GCTATAATTAAATTCTGAACATTTCATAAATTGCCAGAGTTGGGAGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAATTAAATTCTGAACATTTCATAAATTGCCAGAGTTGGGAGCATT  100

seq1  TTGGGGGTGAAAACGGAAAATATTTCGCTTTGAAATCCCAAGCTTCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGTGAAAACGGAAAATATTTCGCTTTGAAATCCCAAGCTTCAGAA  150

seq1  ACTTAAAGGCCCATGGAAGCTGTGTGGCTGTAGGATGCTCCTATTATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAGGCCCATGGAAGCTGTGTGGCTGTAGGATGCTCCTATTATCTG  200

seq1  GTAAGAACGACAGTGCAGAAAGGGGAGAGCCAGCAGGGAGGGAGGAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAACGACAGTGCAGAAAGGGGAGAGCCAGCAGGGAGGGAGGAGAGG  250

seq1  AAGACCGCAGCCTCTGCAAGGCTGAGAAACGTGGTCCCTGCAAATATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCGCAGCCTCTGCAAGGCTGAGAAACGTGGTCCCTGCAAATATTGA  300

seq1  ATGAACACTGCCTTTCTCTGTAGGAGCCGCCTCTCTGCTTCCCCAATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACACTGCCTTTCTCTGTAGGAGCCGCCTCTCTGCTTCCCCAATGCC  350

seq1  GCGTCTGCAGTAACTACAAACTATTTGGTATTCTGTGTTAGTGACGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCTGCAGTAACTACAAACTATTTGGTATTCTGTGTTAGTGACGCTGC  400

seq1  CTTCTCAGATACATCGTTACTACCGAAATAACACTGGCGAGATGTTGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAGATACATCGTTACTACCGAAATAACACTGGCGAGATGTTGGAG  450

seq1  CCCAGTGTCCTTTTTAATTATTAAACTGAGGCCAGTGACTGAGTCATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTCCTTTTTAATTATTAAACTGAGGCCAGTGACTGAGTCATTCC  500

seq1  ACATCCCAGATTCTCCTTCCGTGCTTCTATTTCAAGTGCCTAGTATCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCAGATTCTCCTTCCGTGCTTCTATTTCAAGTGCCTAGTATCTTA  550

seq1  GCTTTTTTTTCACCAACACCTGAGTTGGTTCTTAGCCAGTTCCCCAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTTTTCACCAACACCTGAGTTGGTTCTTAGCCAGTTCCCCAATCT  600

seq1  GCAAAGCCCTTGCAGAACAAATAGTATTATCCAGTCTCCAAACACACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCCCTTGCAGAACAAATAGTATTATCCAGTCTCCAAACACACACT  650

seq1  GATGGCATAAAAATAACCAAACCCACACAAAAACTTTGGTGTGAGATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCATAAAAATAACCAAACCCACACAAAAACTTTGGTGTGAGATCAT  700

seq1  CAGGAAAACCAATGTAGGTCTACCTCCCCTCTGCCAGCCCCCAACTTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAACCAATGTAGGTCTACCTCCCCTCTGCCAGCCCCCAACTTACC  750

seq1  AAGTGGGAGAGCGATGAAGAAGGGGAGCCAACATAAGATGAACATTCCGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAGAGCGATGAAGAAGGGGAGCCAACATAAGATGAACATTCCGA  800

seq1  CTACAATGCCCAAGGTTTTGGCTGCTTTCTTTTCCCTGGAGAACTTAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATGCCCAAGGTTTTGGCTGCTTTCTTTTCCCTGGAGAACTTAAAA  850

seq1  AGTTTGACAGCTATGGAACTCCTGGGG-TTGTGGCCCTTGGCCTTGGTAC  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTTTGACAGCTATGGAACTCCTGGGGTTTGTGGCCCTTGGCCTTGGTAC  900

seq1  TGCTGAGGGTGTCCTCATGAAAGTTCTTAGAGTGGATTCTCAGGGTCAGC  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGCTGAGGGTGTCCTCATGAAAGTTCTTAGAGTGGATTCTCA-GGTCAGC  949

seq1  TCTTTGGAGTTGGACATTTCCTTCATGACTCCCGCCTCCAGATTCTTGGT  999
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  TCTTTGGAGTTGGACATTTCCTTCATGACT-CCGCCTTCAGATTCTTGGT  998

seq1  GGTCCTCTTGGCCACGATGTAGACTCGGCAGTACATGACCAGGATGACCG  1049
      |||| ||||||||||||||||||||| | |||||||||||||||||||||
seq2  GGTCTTCTTGGCCACGATGTAGACTC-GTAGTACATGACCAGGATGACCG  1047

seq1  CC-AGTGGGATGTAGAAGGAG-CCCAGGGAGGAAAAGAGGGCGTAGAAGG  1097
      || | ||||||| |||||||| ||||||||| |||| |  || || ||||
seq2  CCTATTGGGATG-AGAAGGAGCCCCAGGGAGTAAAAAA--GCCTAAAAGG  1094

seq1  GTTCTTCTGTGACCCCACATTCTTTGTCGTCATTGGGCGCAGGTTCTTTC  1147
      ||   |||||   || ||||||||||| | |||||||| | || ||||||
seq2  GT--CTCTGTATACCTACATTCTTTGTTGCCATTGGGCCCTGG-TCTTTC  1141

seq1  CATCCA  1153
      ||||||
seq2  CATCCA  1147

seq1: chr11_43796228_43797057
seq2: B6Ng01-093E11.g_67_896 (reverse)

seq1  CCCCCCACACCTCCCACTCAAGTTAGCACATACCTTATACCAGCATCGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACACCTCCCACTCAAGTTAGCACATACCTTATACCAGCATCGGA  50

seq1  CTCTGTGAAAGCCAGCTACTACTTAATAAAAACATCCTGCTCAAAAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGAAAGCCAGCTACTACTTAATAAAAACATCCTGCTCAAAAGAGG  100

seq1  AGTAATAAAAGTGAGGACTATTTTAAATAATAACAGTGAATTATGACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAAAAGTGAGGACTATTTTAAATAATAACAGTGAATTATGACTTC  150

seq1  CTTTATATTTATTAGGACAACACTGTAAATGGGAAATTGTTGTGCTGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATTTATTAGGACAACACTGTAAATGGGAAATTGTTGTGCTGTCC  200

seq1  TTAGGGAGATGAAAAATTTATTTTCATGGGAATCCCATTGTAGTCTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAGATGAAAAATTTATTTTCATGGGAATCCCATTGTAGTCTCCCA  250

seq1  TTAGAGATCTCTTTGCTGGGAAGGAACCGAGCTCATGGGCCAATACATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGATCTCTTTGCTGGGAAGGAACCGAGCTCATGGGCCAATACATTT  300

seq1  ACGGTCTTCTTGAGACCCTTTGCCATGCCGATGGACTGGAGTCATCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCTTCTTGAGACCCTTTGCCATGCCGATGGACTGGAGTCATCTGAC  350

seq1  GTGGTAGCTCTGGGGAAACAGGAAAGCAGGGGTCTGTCTGTCTGGGCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGCTCTGGGGAAACAGGAAAGCAGGGGTCTGTCTGTCTGGGCAGG  400

seq1  GAGCACTGTTTTCTGGGTTCAGGGACAACATGAATTTTTTGTATGGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACTGTTTTCTGGGTTCAGGGACAACATGAATTTTTTGTATGGTTGT  450

seq1  AAGAGTATTACTCCCCATCCTATGTCATCAGAGAATGGAAGCAAAGATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTATTACTCCCCATCCTATGTCATCAGAGAATGGAAGCAAAGATGA  500

seq1  GATGCTGTTATTTAGATTAAAATTTAAGGGCAATTACTCAGATACAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGTTATTTAGATTAAAATTTAAGGGCAATTACTCAGATACAGCAT  550

seq1  TGCATTATTGCAGTAAAAGCCCATTTCACAGCTTCTGCAAATGAAGGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTATTGCAGTAAAAGCCCATTTCACAGCTTCTGCAAATGAAGGCTT  600

seq1  CCCTTGGCATGCTCTGTGGGCCTTATGTAGGCAGTTCCTTATGTCTGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGCATGCTCTGTGGGCCTTATGTAGGCAGTTCCTTATGTCTGGGG  650

seq1  CCGACTGCACAATGGGCAGCTTTTCTTCTCTAATATGACACATGGACCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTGCACAATGGGCAGCTTTTCTTCTCTAATATGACACATGGACCAG  700

seq1  ATGAGCTACTGCTGAGCAGTGTCAAATTCTTAGTTTTGTCTTGTCACCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTACTGCTGAGCAGTGTCAAATTCTTAGTTTTGTCTTGTCACCCA  750

seq1  GATCTTTTTCCTTATTCTGTCTTCTGTCCTTGGGACAGGCTCAGGCCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTTCCTTATTCTGTCTTCTGTCCTTGGGACAGGCTCAGGCCTGT  800

seq1  CCATAAGGATTCAGGCTTTAGATGGAATTC  830
      ||||||||||||||||||||||||||||||
seq2  CCATAAGGATTCAGGCTTTAGATGGAATTC  830