BAC Information

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BAC

Clone NameB6Ng01-093M23
Chromosome11 (Build37)
Map Location 25,927,692 - 26,046,598
singlet/doubletdoublet
Overlap gene5730522E02Rik, LOC100042328
Upstream genenone
Downstream geneLOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093M23.bB6Ng01-093M23.g
ACCDH905192DH905193
length1,117980
definitionDH905192|Mus musculus domesticus DNA, BAC clone: B6Ng01-093M23, 5' end.DH905193|Mus musculus domesticus DNA, BAC clone: B6Ng01-093M23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,927,692 - 25,928,801)(26,045,620 - 26,046,598)
sequence
gaattctcatccctttctagactcatcccaattttctaatctaaataatc
atttcctttttttttctttttttgatgtgcaaagcagtcaactcagaatt
ttaattggcattctgaggaaccagttgtggggagccgccctcacattcgc
tgttgcaagatggcgctgacatcctgtgttctaagtggtaaacataatct
gcacacgtgcaggggcagttttcccgccatgtgttctgcctttctcgtga
tgacaactgagccgatgggctgcagccaatcagggagtaatacgtcctag
gcggaggataattctccttaaaagggacggggttttgccattctctctct
tgctttcttgttctctctctcttgctttcttgttcttgttctttttctct
ctcttgcactcttgctctcttgcttttgctcttgctctcttgcactcttg
cactcttgctctctggctcctgaagatgtaagcaataaagctttgccgca
gaagattccggtttgttgcgttcttcctggccggtcgtgaatgcgtgtaa
gaaccagtcattgaatatcacttgaagttttcaggttggactaatatgtt
gaaattaattcctgaaaactagaacatctgtttacatgtgacacggagaa
aaatcaatcccaggtttatgtttagttgctcatttgtaaggagagataat
gggttagccatttccacaagtgcttttaatgcttttactatttgaaaaaa
aaaaaaaaagactaactatataatacaatcctggatttattattttaata
gtgttctcccaaagtaaagatgttggagatattcaattcataaagtaata
gatttttaacttgttgaaagtatatatatatatatatatatatatatatc
ttcacgcacacacaatactgggatgctatgtaaacaatctttttttgttc
tacttttctgcaaaagtactattatggagagagtaatcagctgtaattat
tgcttttgaaaactccagactttaaaattcacaaaatacttttaaaaata
aatgcagggaggctttggtggaatacatttttctccatttcacaagaaaa
aaaaccattcaaaccag
gaattcagtctctctctgtctctttcctcctcctcctcctcccccctctc
tctttctctctctctccttccctccctctctctctctccttgtacttgtg
tctcaagtagcttctgtgatttaaacagagatcagaggaagaaaaagtta
aacagatggttgtacttcatgctaaaccttacagtaattgtctgcagttc
ttgcttcttgtgctccaaatatattcatagaattgccactgttgcttcac
caagtactagttttgtttattcaaattctttcattattgaattccaccta
agattacctttgcattatccatgcaatgatcccatacctaatgtatgagt
atgttaatggctttgtgttcaaggtatgttctgaatacaaccacttgctg
taatttcctcgaccactgtgtcccatgttttttttttttttttttttttt
tgcctcagctagaccacagtgtctttctttctcttgggctctaatccttg
atctcttgttcttaaaaaagtaattcattcacaatttagattatccatga
atttaagaagaggcagacagcaacacaggagaggatagcgggaggaggga
gaatgatgtaaacagcacatataaatgcacgtcaaaataattaggaatat
aaacactcaggccatttcatttctttcctatgccatcacagactgctaag
tccttactgtggcctgcctctctctcttctgccctccctcatcatttctg
ctccctgattttctcctctctggtgttgttgaacacacacttgctgtctc
ctcagaatctagacctgcaatgttctgtcttctaatggatggggttttgt
gccttctaaggtttgctcagtttgaattcacatgagaggattttcgaaca
agaacagtcttcttgatgtggctgctttagattttaatggatagaaaagg
tttccatctctaataattaactttaccatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_25927692_25928801
seq2: B6Ng01-093M23.b_46_1162

seq1  GAATTCTCATCCCTTTCTAGACTCATCCCAATTTTCTAATCTAAATAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCCCTTTCTAGACTCATCCCAATTTTCTAATCTAAATAATC  50

seq1  ATTTCCTTTTTTTTTCTTTTTTTGATGTGCAAAGCAGTCAACTCAGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTTTTTTTTCTTTTTTTGATGTGCAAAGCAGTCAACTCAGAATT  100

seq1  TTAATTGGCATTCTGAGGAACCAGTTGTGGGGAGCCGCCCTCACATTCGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGGCATTCTGAGGAACCAGTTGTGGGGAGCCGCCCTCACATTCGC  150

seq1  TGTTGCAAGATGGCGCTGACATCCTGTGTTCTAAGTGGTAAACATAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCAAGATGGCGCTGACATCCTGTGTTCTAAGTGGTAAACATAATCT  200

seq1  GCACACGTGCAGGGGCAGTTTTCCCGCCATGTGTTCTGCCTTTCTCGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACGTGCAGGGGCAGTTTTCCCGCCATGTGTTCTGCCTTTCTCGTGA  250

seq1  TGACAACTGAGCCGATGGGCTGCAGCCAATCAGGGAGTAATACGTCCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACTGAGCCGATGGGCTGCAGCCAATCAGGGAGTAATACGTCCTAG  300

seq1  GCGGAGGATAATTCTCCTTAAAAGGGACGGGGTTTTGCCATTCTCTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGGATAATTCTCCTTAAAAGGGACGGGGTTTTGCCATTCTCTCTCT  350

seq1  TGCTTTCTTGTTCTCTCTCTCTTGCTTTCTTGTTCTTGTTCTTTTTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTTGTTCTCTCTCTCTTGCTTTCTTGTTCTTGTTCTTTTTCTCT  400

seq1  CTCTTGCACTCTTGCTCTCTTGCTTTTGCTCTTGCTCTCTTGCACTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCACTCTTGCTCTCTTGCTTTTGCTCTTGCTCTCTTGCACTCTTG  450

seq1  CACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCA  500

seq1  GAAGATTCCGGTTTGTTGCGTTCTTCCTGGCCGGTCGTGAATGCGTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTCCGGTTTGTTGCGTTCTTCCTGGCCGGTCGTGAATGCGTGTAA  550

seq1  GAACCAGTCATTGAATATCACTTGAAGTTTTCAGGTTGGACTAATATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGTCATTGAATATCACTTGAAGTTTTCAGGTTGGACTAATATGTT  600

seq1  GAAATTAATTCCTGAAAACTAGAACATCTGTTTACATGTGACACGGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAATTCCTGAAAACTAGAACATCTGTTTACATGTGACACGGAGAA  650

seq1  AAATCAATCCCAGGTTTATGTTTAGTTGCTCATTTGTAAGGAGAGATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATCCCAGGTTTATGTTTAGTTGCTCATTTGTAAGGAGAGATAAT  700

seq1  GGGTTAGCCATTTCCACAAGTGCTTTTAATGCTTTTACTATTTGAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGCCATTTCCACAAGTGCTTTTAATGCTTTTACTATTTGAAAAAA  750

seq1  AAAAAAAAAGACTAACTATATAATACAATCCTGGATTTATTATTTTAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGACTAACTATATAATACAATCCTGGATTTATTATTTTAATA  800

seq1  GTGTTCTCCCAAAGTAAAGATGTTGGAGATATTCAATTCATAAAGTAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTCCCAAAGTAAAGATGTTGGAGATATTCAATTCATAAAGTAATA  850

seq1  GATTTTTAACTTGTTGAAAGTATATATATATATATATATATATATATATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTAACTTGTTGAAAGTATATATATATATATATATATATATATATC  900

seq1  TTCACGCACACACAATACTGGGATGCTATGTAAACAATCTTTTTTTGTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGCACACACAATACTGGGATGCTATGTAAACAATCTTTTTTTGTTC  950

seq1  TACTTTTCTGCAAAAGTACTA-TATGGAGAGAGTAATCAGCTGTAATTAT  999
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TACTTTTCTGCAAAAGTACTATTATGGAGAGAGTAATCAGCTGTAATTAT  1000

seq1  TGCTTTTGAAAACT-CAGACTTTAAAATCCACAAAATAC-TTTAAAAATA  1047
      |||||||||||||| ||||||||||||| |||||||||| ||||||||||
seq2  TGCTTTTGAAAACTCCAGACTTTAAAATTCACAAAATACTTTTAAAAATA  1050

seq1  AATGCAGGAAG--CTTCGTGAAATACA-TTTTCT-CATTTCAACAAAGAA  1093
      |||||||| ||   || ||| |||||| |||||| |||||| ||||  ||
seq2  AATGCAGGGAGGCTTTGGTGGAATACATTTTTCTCCATTTC-ACAAGAAA  1099

seq1  AAAAACCA-TCAAACCAG  1110
      |||||||| |||||||||
seq2  AAAAACCATTCAAACCAG  1117

seq1: chr11_26045620_26046598
seq2: B6Ng01-093M23.g_70_1049 (reverse)

seq1  GATGGTAAAGTAAAATTATTAGAGATGGAAAAC-TTTCTACTCATTAAAA  49
      |||||||||||  |||||||||||||||||| | ||||||  ||||||||
seq2  GATGGTAAAGT-TAATTATTAGAGATGGAAACCTTTTCTATCCATTAAAA  49

seq1  TCTAAAGCAG-CACAATCAGAAGACTGTTACTGTTCGAAAATCCTCTCAT  98
      |||||||||| ||||   |||||||||||  |||||||||||||||||||
seq2  TCTAAAGCAGCCACATCAAGAAGACTGTTCTTGTTCGAAAATCCTCTCAT  99

seq1  GTGAATTCAAATCTGAGCAAAACCTAGAAGGCACAAAA-CCCATGCATTA  147
      ||||||||||| ||||||||| | |||||||||||||| ||||| |||||
seq2  GTGAATTCAAA-CTGAGCAAACCTTAGAAGGCACAAAACCCCATCCATTA  148

seq1  GAAGACAGAACATTGCAGGTCTAGATTCTGAGGAGACAGCAAGTGTGTGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGAACATTGCAGGTCTAGATTCTGAGGAGACAGCAAGTGTGTGT  198

seq1  TCAACAACAACAGAGAGGAGAAAATCAGGGAGCAGAAATGATGAGGGAGG  247
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAACACCAGAGAGGAGAAAATCAGGGAGCAGAAATGATGAGGGAGG  248

seq1  GCAGAAGAGAGAGAGGCAGGCCACAGTAAGGACTTAGCAGTCTGTGATGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGAGAGAGAGGCAGGCCACAGTAAGGACTTAGCAGTCTGTGATGG  298

seq1  CATAGGAAAGAAATGAAATGGCCTGAGTGTTTATATTCCTAATTATTTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAAAGAAATGAAATGGCCTGAGTGTTTATATTCCTAATTATTTTG  348

seq1  ACGTGCATTTATATGTGCTGTTTACATCATTCTCCCTCCTCCCGCTATCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCATTTATATGTGCTGTTTACATCATTCTCCCTCCTCCCGCTATCC  398

seq1  TCTCCTGTGTTGCTGTCTGCCTCTTCTTAAATTCATGGATAATCTAAATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGTGTTGCTGTCTGCCTCTTCTTAAATTCATGGATAATCTAAATT  448

seq1  GTGAATGAATTACTTTTTTAAGAACAAGAGATCAAGGATTAGAGCCCAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGAATTACTTTTTTAAGAACAAGAGATCAAGGATTAGAGCCCAAG  498

seq1  AGAAAGAAAGACACTGTGGTCTAGCTGAGGCAAAAAAAAAAAAAAAAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGACACTGTGGTCTAGCTGAGGCAAAAAAAAAAAAAAAAAAA  548

seq1  AAAAACATGGGACACAGTGGTCGAGGAAATTACAGCAAGTGGTTGTATTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATGGGACACAGTGGTCGAGGAAATTACAGCAAGTGGTTGTATTC  598

seq1  AGAACATACCTTGAACACAAAGCCATTAACATACTCATACATTAGGTATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATACCTTGAACACAAAGCCATTAACATACTCATACATTAGGTATG  648

seq1  GGATCATTGCATGGATAATGCAAAGGTAATCTTAGGTGGAATTCAATAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCATTGCATGGATAATGCAAAGGTAATCTTAGGTGGAATTCAATAAT  698

seq1  GAAAGAATTTGAATAAACAAAACTAGTACTTGGTGAAGCAACAGTGGCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATTTGAATAAACAAAACTAGTACTTGGTGAAGCAACAGTGGCAA  748

seq1  TTCTATGAATATATTTGGAGCACAAGAAGCAAGAACTGCAGACAATTACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGAATATATTTGGAGCACAAGAAGCAAGAACTGCAGACAATTACT  798

seq1  GTAAGGTTTAGCATGAAGTACAACCATCTGTTTAACTTTTTCTTCCTCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTTTAGCATGAAGTACAACCATCTGTTTAACTTTTTCTTCCTCTG  848

seq1  ATCTCTGTTTAAATCACAGAAGCTACTTGAGACACAAGTACAAGGAGAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTTTAAATCACAGAAGCTACTTGAGACACAAGTACAAGGAGAGA  898

seq1  GAGAGAGGGAGGGAAGGAGAGAGAGAGAAAGAGAGAGGGGGGAGGAGGAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGGGAGGGAAGGAGAGAGAGAGAAAGAGAGAGGGGGGAGGAGGAG  948

seq1  GAGGAGGAAAGAGACAGAGAGAGACTGAATTC  979
      ||||||||||||||||||||||||||||||||
seq2  GAGGAGGAAAGAGACAGAGAGAGACTGAATTC  980