BAC Information

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BAC

Clone NameB6Ng01-094F18
Chromosome11 (Build37)
Map Location 74,359,677 - 74,539,226
singlet/doubletdoublet
Overlap geneGarnl4, E130309D14Rik, 1300001I01Rik, Pafah1b1
Upstream geneOlfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412
Downstream geneMett10d, Mnt, Rutbc1, Tsr1, Srr, LOC100042478, Smg6, LOC100043429, LOC627835, Hic1, LOC668604, Ovca2, Dph1, Rtn4rl1, Rpa1, Smyd4, Serpinf1, LOC100043447, Serpinf2, Wdr81, LOC100042498, 2010305C02Rik, Prpf8, Rilp, Scarf1, Slc43a2, Pitpna, LOC654359, Pps, Myo1c, Crk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094F18.bB6Ng01-094F18.g
ACCDH905605DH905606
length9491,126
definitionDH905605|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F18, 5' end.DH905606|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,538,279 - 74,539,226)(74,359,677 - 74,360,817)
sequence
gaattcactgggtagagaaggctcttgaacttggaaagatccacctgtct
ctgcctccaaagtgctgatattaaaacaccatgtccagctttaaatcatt
attttaagatagggtcttactatatacaccatgctggcttcaaactcgtg
gcaagtctcctgcctccgtctcctcagtgttagcattacagatgtgagtc
accctagcttgtttattactatcatcattgttttttgttttttataaaaa
ggatgctcctgaggcttgcagagaacttctgggctcttgctggtctcctg
cctcctgagtagcttgggctacgtgccatgtgccactttgtttggctact
gggtttattttatactgatactgaggccaaaaagagatatgataatttag
tcaaggtcacattcccagtggtgacaccaggattcatactggagacatta
actctgcagcttcccaagtgatttttacagtatttaccttcatcgaggga
cgcaatagaatcagttaagcctcagtgctggaaaacacaagtggataatg
aagtaatctcattcaatacttaaatatcctatattgaataattcagagcc
ccaaaccttccctttcaaaaatcaagtgtctctttgtggaataaattgac
atcaaatccccccagatttgtcatcaatatacaattcataatataataaa
acacagacatgtcttgtagagaataaagttccaggtctttctgtggattt
cagtttccagaatctctgatgaatacatgtgactaaaggaaaagaatagc
tgaatcacatctacaggcgattccttccgattaaaatctgtaccagaaag
gaacacaagggcaatccatctgccttttaacctcaacagctcttctgccc
aagcccaccaatttactttggtccttttgggtgggtgggtaggtggggg
gaattccaaaagctcacaagctagacacctagcttaattgtcaagttcca
ggttccagtgagacactatctttaataaatcatgatggaacctggagaga
tggctcagcagttaagagcaatggctggtcttctggagtacccaggttag
actcccacaactccagatccagggaagctgatgccctcttctggtctcct
taggcactacatgaacgtggtgtacagacagaggcagaaaaaacaccgac
ccacagaaaattaaaaaataagtcttagctgggcaggggtggtgcacacc
tttaaacccagcacttgggaggcagaggcaggcggatttctgagttcgag
gccagcctggtctacagagtgagttccaggacagccagggctacacagag
aaaccctgtctcaaaaaaccaaaaaaagaaaaaaggaaaggaaaggaaag
gaaaggaaaggaaaggaaaggaaaggaagaaagaaagaaaaaataaatct
atttttaaaagttgaagtacacagctcttcagtaacaacacctgagattg
acctatgacctatacctaacacactcgtgacacacaccaagaaaagaaac
taacttatagtcaagaataaatgggtactgttatcaactaggatggcaga
tctcatgttaagcattcttgccacaataaaataaaactcagatgttgagg
gtgaggttacatcccagtttaaaaaattaaaataaaaaaaaattttttaa
agagcttacggtagagaagttttatctctgtaggctgaagtggcccctca
cagcagaagccgtgatgctgtctcctgtctctgcctgattattgggtttc
tctccctttgcagcacgagctctggctgcctctatcaaaggcagcaggaa
cttgctggagtgctggaggagagagctgcgtgtgacagtaggagagggaa
gtggtattctcagtcggggagggtcccgacttcagtcagccttcagcctt
tcactgagacgaagctctgggaggagggccaggcactgccggtagaacag
tccccgtttctagagcacggtaagcagttattactttgtaaatgtagcca
gctgcaccagcgagcatgaatgaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_74538279_74539226
seq2: B6Ng01-094F18.b_43_991 (reverse)

seq1  CCCCCACCTACCCACCCACCCAAAAGGACCAAAGTAAATTGGTGGGCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCTACCCACCCACCCAAAAGGACCAAAGTAAATTGGTGGGCTTG  50

seq1  GGCAGAAGAGCTGTTGAGGTTAAAAGGCAGATGGATTG-CCTTGTGTTCC  99
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGCAGAAGAGCTGTTGAGGTTAAAAGGCAGATGGATTGCCCTTGTGTTCC  100

seq1  TTTCTGGTACAGATTTTTAATCGGAAGGAATCGCCTGTAGATGTGATTCA  149
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTACAGA-TTTTAATCGGAAGGAATCGCCTGTAGATGTGATTCA  149

seq1  GCTATTCTTTTCC-TTAGTCACATGTATTCATCAGAGATTCTGGAAACTG  198
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCTATTCTTTTCCTTTAGTCACATGTATTCATCAGAGATTCTGGAAACTG  199

seq1  AAATCCACAGAAAGACCTGGAACTTTATTCTCTACAAGACATGTCTGTGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACAGAAAGACCTGGAACTTTATTCTCTACAAGACATGTCTGTGT  249

seq1  TTTATTATATTATGAATTGTATATTGATGACAAATCTGGGGGGATTTGAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATATTATGAATTGTATATTGATGACAAATCTGGGGGGATTTGAT  299

seq1  GTCAATTTATTCCACAAAGAGACACTTGATTTTTGAAAGGGAAGGTTTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTTATTCCACAAAGAGACACTTGATTTTTGAAAGGGAAGGTTTGG  349

seq1  GGCTCTGAATTATTCAATATAGGATATTTAAGTATTGAATGAGATTACTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGAATTATTCAATATAGGATATTTAAGTATTGAATGAGATTACTT  399

seq1  CATTATCCACTTGTGTTTTCCAGCACTGAGGCTTAACTGATTCTATTGCG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCCACTTGTGTTTTCCAGCACTGAGGCTTAACTGATTCTATTGCG  449

seq1  TCCCTCGATGAAGGTAAATACTGTAAAAATCACTTGGGAAGCTGCAGAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCGATGAAGGTAAATACTGTAAAAATCACTTGGGAAGCTGCAGAGT  499

seq1  TAATGTCTCCAGTATGAATCCTGGTGTCACCACTGGGAATGTGACCTTGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCTCCAGTATGAATCCTGGTGTCACCACTGGGAATGTGACCTTGA  549

seq1  CTAAATTATCATATCTCTTTTTGGCCTCAGTATCAGTATAAAATAAACCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTATCATATCTCTTTTTGGCCTCAGTATCAGTATAAAATAAACCC  599

seq1  AGTAGCCAAACAAAGTGGCACATGGCACGTAGCCCAAGCTACTCAGGAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCCAAACAAAGTGGCACATGGCACGTAGCCCAAGCTACTCAGGAGG  649

seq1  CAGGAGACCAGCAAGAGCCCAGAAGTTCTCTGCAAGCCTCAGGAGCATCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGACCAGCAAGAGCCCAGAAGTTCTCTGCAAGCCTCAGGAGCATCC  699

seq1  TTTTTATAAAAAACAAAAAACAATGATGATAGTAATAAACAAGCTAGGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAAAAAACAAAAAACAATGATGATAGTAATAAACAAGCTAGGGT  749

seq1  GACTCACATCTGTAATGCTAACACTGAGGAGACGGAGGCAGGAGACTTGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACATCTGTAATGCTAACACTGAGGAGACGGAGGCAGGAGACTTGC  799

seq1  CACGAGTTTGAAGCCAGCATGGTGTATATAGTAAGACCCTATCTTAAAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGTTTGAAGCCAGCATGGTGTATATAGTAAGACCCTATCTTAAAAT  849

seq1  AATGATTTAAAGCTGGACATGGTGTTTTAATATCAGCACTTTGGAGGCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTAAAGCTGGACATGGTGTTTTAATATCAGCACTTTGGAGGCAG  899

seq1  AGACAGGTGGATCTTTCCAAGTTCAAGAGCCTTCTCTACCCAGTGAATTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGTGGATCTTTCCAAGTTCAAGAGCCTTCTCTACCCAGTGAATTC  949

seq1: chr11_74359677_74360817
seq2: B6Ng01-094F18.g_68_1193

seq1  GAATTCCAAAAGCTCACAAGCTAGACACCTAGCTTAATTGTCAAGTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAAGCTCACAAGCTAGACACCTAGCTTAATTGTCAAGTTCCA  50

seq1  GGTTCCAGTGAGACACTATCTTTAATAAATCATGATGGAACCTGGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCAGTGAGACACTATCTTTAATAAATCATGATGGAACCTGGAGAGA  100

seq1  TGGCTCAGCAGTTAAGAGCAATGGCTGGTCTTCTGGAGTACCCAGGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGCAGTTAAGAGCAATGGCTGGTCTTCTGGAGTACCCAGGTTAG  150

seq1  ACTCCCACAACTCCAGATCCAGGGAAGCTGATGCCCTCTTCTGGTCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCACAACTCCAGATCCAGGGAAGCTGATGCCCTCTTCTGGTCTCCT  200

seq1  TAGGCACTACATGAACGTGGTGTACAGACAGAGGCAGAAAAAACACCGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCACTACATGAACGTGGTGTACAGACAGAGGCAGAAAAAACACCGAC  250

seq1  CCACAGAAAATTAAAAAATAAGTCTTAGCTGGGCAGGGGTGGTGCACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAAAATTAAAAAATAAGTCTTAGCTGGGCAGGGGTGGTGCACACC  300

seq1  TTTAAACCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAG  350

seq1  GCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAG  400

seq1  AAACCCTGTCTCAAAAAACCAAAAAAAGAAAAAAGGAAAGGAAAGGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGTCTCAAAAAACCAAAAAAAGAAAAAAGGAAAGGAAAGGAAAG  450

seq1  GAAAGGAAAGGAAAGGAAAGGAAAGGAAGAAAGAAAGAAAAAATAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAAGGAAAGGAAAGGAAAGGAAGAAAGAAAGAAAAAATAAATCT  500

seq1  ATTTTTAAAAGTTGAAGTACACAGCTCTTCAGTAACAACACCTGAGATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAAAGTTGAAGTACACAGCTCTTCAGTAACAACACCTGAGATTG  550

seq1  ACCTATGACCTATACCTAACACACTCGTGACACACACCAAGAAAAGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATGACCTATACCTAACACACTCGTGACACACACCAAGAAAAGAAAC  600

seq1  TAACTTATAGTCAAGAATAAATGGGTACTGTTATCAACTAGGATGGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTATAGTCAAGAATAAATGGGTACTGTTATCAACTAGGATGGCAGA  650

seq1  TCTCATGTTAAGCATTCTTGCCACAATAAAATAAAACTCAGATGTTGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTTAAGCATTCTTGCCACAATAAAATAAAACTCAGATGTTGAGG  700

seq1  GTGAGGTTACATCCCAGTTTAAAAAATTAAAATAAAAAAAAATTTTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTTACATCCCAGTTTAAAAAATTAAAATAAAAAAAAATTTTTTAA  750

seq1  AGAGCTTACGGTAGAGAAGTTTTATCTCTGTAGGCTGAAGTGGCCCCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTACGGTAGAGAAGTTTTATCTCTGTAGGCTGAAGTGGCCCCTCA  800

seq1  CAGCAG-AGCCGTGATGCTGTCTCCTGTCTCTGCCTGATTATTGGGTTTC  849
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAAGCCGTGATGCTGTCTCCTGTCTCTGCCTGATTATTGGGTTTC  850

seq1  TCTCCCTTTGCAGCACGAGCTCTGGCTGCCTCTATCAAAGGCAGCAGGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTTGCAGCACGAGCTCTGGCTGCCTCTATCAAAGGCAGCAGGAA  900

seq1  CTTGCTGGAGTGCTGGAGGAGAGAGCTGCGTGTGACAGTAGGAGGAAGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  CTTGCTGGAGTGCTGGAGGAGAGAGCTGCGTGTGACAGTAGGAG--AGGG  948

seq1  AAGTGGGTATTCTCAGTCGGGGGAGGGGTCACGACCTCAGTCAGCC-TCA  998
      |||| |||||||||||||||||   ||||| |||| |||||||||| |||
seq2  AAGT-GGTATTCTCAGTCGGGG--AGGGTCCCGACTTCAGTCAGCCTTCA  995

seq1  GCCTTTCACTGAGAACCGAAGCTCCTGGGAGGAGGGGCAGGCACTG-CGG  1047
      ||||||||||||||  ||||||| |||||||||||| ||||||||| |||
seq2  GCCTTTCACTGAGA--CGAAGCT-CTGGGAGGAGGGCCAGGCACTGCCGG  1042

seq1  TAAGGAACAGTCCCCGTTATCTAAGAGGCACCGGAAAGCAAGTAATTATC  1097
      ||  |||||||||||||| ||| ||| ||| ||| |||| ||| |||| |
seq2  TA--GAACAGTCCCCGTT-TCT-AGA-GCA-CGGTAAGC-AGTTATTA-C  1084

seq1  TTTGAGATGGAAGCCAGCTGCACCAGCGAGCAATGAAGAGAGGG  1141
      ||||  |  | |||||||||||||||||||| |||||  |||||
seq2  TTTGTAAATGTAGCCAGCTGCACCAGCGAGC-ATGAA-TGAGGG  1126