BAC Information

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BAC

Clone NameB6Ng01-094K11
Chromosome11 (Build37)
Map Location 38,426,425 - 38,607,499
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039148, LOC276941
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094K11.bB6Ng01-094K11.g
ACCDH905816DH905817
length7571,113
definitionDH905816|Mus musculus domesticus DNA, BAC clone: B6Ng01-094K11, 5' end.DH905817|Mus musculus domesticus DNA, BAC clone: B6Ng01-094K11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,606,743 - 38,607,499)(38,426,425 - 38,427,550)
sequence
gaattctttatatgtgtacttacatatgcacataaatatgaactcacata
agtatgtatgcatcctatcaattcagttcctctagagaaccctgactaac
tccgcatgtttgattattatgttttataagctaactagaatactatgtct
agatttaaaaataaaacatccagccaagcatcaagtaggcacagagtaat
aaaaggtcaacccaaaatactgcatcttcagttaactacattattaacat
agcacaagtcaggatcattgctttggttgccacagaagtttgtacaacag
atattcgttcacattacatgcagttgttttggttgtaagagactttagtt
gaaggtgtaaatctcttccatctcaaaattatgtgtctctttgatacaac
ccatagtttttgcttaagttgaaaagttttttttttttttaatttagaga
cagataaaaaagtaacagtaaaagaaactatagaatcctctaagacgcgg
caggataaacaaacctgcttagaaagatagtttgaaaaacaaaaaagttt
taccatttatctactggttgaaatcatatgtagatgaagggagcctgtta
aaagccatcattgactgtagggctgcatctcacggggacattggctctgt
ttgagaactcttctgacaaatgttgcccattcttgtactggctcatcctg
agtcctatacttggataatgttttctctcacctcagtgatatgagtgtgt
gtgtgtg
gaattctttcaaggtgcagatttgcagggtatagccaggcaaggagggag
actacttaaacacaaaacttgcaacttcaacatagccaaccagactatag
catttacctggaaataagaatattttctcagagtaatcttggaatcttgt
ttgtgctgaaaattactgtaaatgtatgctgtagtatttagaagagcaga
gacaatgtattaattttttttctgaaaatcttcaaatttggaaattcttg
taaaggataaatcagtctctgattaggataccaactacattttgctcttt
gttagtgggtaagggcatgtattatcaaagacagggaaagcctcatgata
aagcaaaatataatataccatttatgcagtgggctagatattgtaacatg
accactctacaaagaaactgtctatttccagcctgaacacaaaggcgttg
aaattcacagatgggacttgcctgagattgtatggctggcttggattaag
gctgagttgaaactctgctactccataaatttgtcatcttttagagtagt
cacgattggctttacctaattgtaaatatcatcatagcaatgtaatttca
cacctgtttgaattgtgtcacttagaattagattactgtggtcgttatac
tggtgtttctgtgtgtgtttgtgacccttcaagacctataaagcataaca
aactggcagaatctcgaaatttgtttcatttttaatatgcaagggcaccg
actaaaactggggcatgaagtgaaggattggtgattatttttactggggc
tcatttttaaagcattatttaaaacttcatgttcgtttgaataaagaata
ctgacacatcgttccaattaaaattggataaagtgaggatatgacaatct
ccttctaaatgttactatcaccttacagtctctgccagcgactacatcag
ctatctccccactgccaggtgtttgatctttattcttgcatatgtaaata
tataccacatgtctgcatggtgttatggaaggccaggcataataaaggtc
aatttttattactttaatgtagatatcttgtggagctcttggcatttact
ttacttcctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_38606743_38607499
seq2: B6Ng01-094K11.b_43_799 (reverse)

seq1  CACACACACACACTCATATCACTGAGGTGAGAGAAAACATTATCCAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACTCATATCACTGAGGTGAGAGAAAACATTATCCAAGTA  50

seq1  TAGGACTCAGGATGAGCCAGTACAAGAATGGGCAACATTTGTCAGAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTCAGGATGAGCCAGTACAAGAATGGGCAACATTTGTCAGAAGAG  100

seq1  TTCTCAAACAGAGCCAATGTCCCCGTGAGATGCAGCCCTACAGTCAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAACAGAGCCAATGTCCCCGTGAGATGCAGCCCTACAGTCAATGA  150

seq1  TGGCTTTTAACAGGCTCCCTTCATCTACATATGATTTCAACCAGTAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTAACAGGCTCCCTTCATCTACATATGATTTCAACCAGTAGATA  200

seq1  AATGGTAAAACTTTTTTGTTTTTCAAACTATCTTTCTAAGCAGGTTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTAAAACTTTTTTGTTTTTCAAACTATCTTTCTAAGCAGGTTTGTT  250

seq1  TATCCTGCCGCGTCTTAGAGGATTCTATAGTTTCTTTTACTGTTACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGCCGCGTCTTAGAGGATTCTATAGTTTCTTTTACTGTTACTTTT  300

seq1  TTATCTGTCTCTAAATTAAAAAAAAAAAAAACTTTTCAACTTAAGCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTCTCTAAATTAAAAAAAAAAAAAACTTTTCAACTTAAGCAAAA  350

seq1  ACTATGGGTTGTATCAAAGAGACACATAATTTTGAGATGGAAGAGATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGGGTTGTATCAAAGAGACACATAATTTTGAGATGGAAGAGATTTA  400

seq1  CACCTTCAACTAAAGTCTCTTACAACCAAAACAACTGCATGTAATGTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCAACTAAAGTCTCTTACAACCAAAACAACTGCATGTAATGTGAA  450

seq1  CGAATATCTGTTGTACAAACTTCTGTGGCAACCAAAGCAATGATCCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATATCTGTTGTACAAACTTCTGTGGCAACCAAAGCAATGATCCTGAC  500

seq1  TTGTGCTATGTTAATAATGTAGTTAACTGAAGATGCAGTATTTTGGGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTATGTTAATAATGTAGTTAACTGAAGATGCAGTATTTTGGGTTG  550

seq1  ACCTTTTATTACTCTGTGCCTACTTGATGCTTGGCTGGATGTTTTATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTATTACTCTGTGCCTACTTGATGCTTGGCTGGATGTTTTATTTT  600

seq1  TAAATCTAGACATAGTATTCTAGTTAGCTTATAAAACATAATAATCAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTAGACATAGTATTCTAGTTAGCTTATAAAACATAATAATCAAAC  650

seq1  ATGCGGAGTTAGTCAGGGTTCTCTAGAGGAACTGAATTGATAGGATGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGGAGTTAGTCAGGGTTCTCTAGAGGAACTGAATTGATAGGATGCAT  700

seq1  ACATACTTATGTGAGTTCATATTTATGTGCATATGTAAGTACACATATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTTATGTGAGTTCATATTTATGTGCATATGTAAGTACACATATAA  750

seq1  AGAATTC  757
      |||||||
seq2  AGAATTC  757

seq1: chr11_38426425_38427550
seq2: B6Ng01-094K11.g_66_1178

seq1  GAATTCTTTCAAGGTGCAGATTTGCAGGGTATAGCCAGGCAAGGAGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAAGGTGCAGATTTGCAGGGTATAGCCAGGCAAGGAGGGAG  50

seq1  ACTACTTAAACACAAAACTTGCAACTTCAACATAGCCAACCAGACTATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTAAACACAAAACTTGCAACTTCAACATAGCCAACCAGACTATAG  100

seq1  CATTTACCTGGAAATAAGAATATTTTCTCAGAGTAATCTTGGAATCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACCTGGAAATAAGAATATTTTCTCAGAGTAATCTTGGAATCTTGT  150

seq1  TTGTGCTGAAAATTACTGTAAATGTATGCTGTAGTATTTAGAAGAGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTGAAAATTACTGTAAATGTATGCTGTAGTATTTAGAAGAGCAGA  200

seq1  GACAATGTATTAATTTTTTTTCTGAAAATCTTCAAATTTGGAAATTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGTATTAATTTTTTTTCTGAAAATCTTCAAATTTGGAAATTCTTG  250

seq1  TAAAGGATAAATCAGTCTCTGATTAGGATACCAACTACATTTTGCTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGATAAATCAGTCTCTGATTAGGATACCAACTACATTTTGCTCTTT  300

seq1  GTTAGTGGGTAAGGGCATGTATTATCAAAGACAGGGAAAGCCTCATGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGGGTAAGGGCATGTATTATCAAAGACAGGGAAAGCCTCATGATA  350

seq1  AAGCAAAATATAATATACCATTTATGCAGTGGGCTAGATATTGTAACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAATATAATATACCATTTATGCAGTGGGCTAGATATTGTAACATG  400

seq1  ACCACTCTACAAAGAAACTGTCTATTTCCAGCCTGAACACAAAGGCGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCTACAAAGAAACTGTCTATTTCCAGCCTGAACACAAAGGCGTTG  450

seq1  AAATTCACAGATGGGACTTGCCTGAGATTGTATGGCTGGCTTGGATTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACAGATGGGACTTGCCTGAGATTGTATGGCTGGCTTGGATTAAG  500

seq1  GCTGAGTTGAAACTCTGCTACTCCATAAATTTGTCATCTTTTAGAGTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTTGAAACTCTGCTACTCCATAAATTTGTCATCTTTTAGAGTAGT  550

seq1  CACGATTGGCTTTACCTAATTGTAAATATCATCATAGCAATGTAATTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGATTGGCTTTACCTAATTGTAAATATCATCATAGCAATGTAATTTCA  600

seq1  CACCTGTTTGAATTGTGTCACTTAGAATTAGATTACTGTGGTCGTTATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTTTGAATTGTGTCACTTAGAATTAGATTACTGTGGTCGTTATAC  650

seq1  TGGTGTTTCTGTGTGTGTTTGTGACCCTTCAAGACCTATAAAGCATAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTTCTGTGTGTGTTTGTGACCCTTCAAGACCTATAAAGCATAACA  700

seq1  AACTGGCAGAATCTCGAAATTTGTTTCATTTTTAATATGCAAGGGCACCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCAGAATCTCGAAATTTGTTTCATTTTTAATATGCAAGGGCACCG  750

seq1  ACTAAAACTGGGGCATGAAGTGAAGGATTGGTGATTATTTTTACTGGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACTGGGGCATGAAGTGAAGGATTGGTGATTATTTTTACTGGGGC  800

seq1  TCATTTTTAAAGCATTATTTAAAACTTCATGTTCGTTTGAATAAAGAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTAAAGCATTATTTAAAACTTCATGTTCGTTTGAATAAAGAATA  850

seq1  CTGACACATCGTTCCAAATTAAAATTGGATAAAAGTGAGGATAATGACAA  900
      ||||||||||||||| |||||||||||||| ||||||||||| |||||||
seq2  CTGACACATCGTTCC-AATTAAAATTGGAT-AAAGTGAGGAT-ATGACAA  897

seq1  TCTCCTTCTAAATGTTACTATCACCTTACAGTCTCTGCCAGCGACTACAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCTCCTTCTAAATGTTACTATCACCTTACAGTCTCTGCCAGCGACTAC-A  946

seq1  TCAGCTATTCTCCCCACTGCCAGGTGTTTGATCTTTAATTCTTGCATATG  1000
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  TCAGCTA-TCTCCCCACTGCCAGGTGTTTGATCTTT-ATTCTTGCATATG  994

seq1  TAAATATATACACAATGTCTGCAT-GTGTATTGAAAGGCCAGGCATAATA  1049
      |||||||||||   |||||||||| ||||  || ||||||||||||||||
seq2  TAAATATATACCACATGTCTGCATGGTGTTATGGAAGGCCAGGCATAATA  1044

seq1  AAAGTATCATATTTTTATTACTTTAATGTTAGATAATTCTTGT-GAGCTT  1098
      || |  ||| |||||||||||||||||| ||||||  |||||| |||| |
seq2  AAGG--TCA-ATTTTTATTACTTTAATG-TAGATA--TCTTGTGGAGC-T  1087

seq1  CTTGGCATTTTACTTTCACTTCCTCTCT  1126
      ||||||| |||||||| |||||||||||
seq2  CTTGGCA-TTTACTTT-ACTTCCTCTCT  1113