BAC Information

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BAC

Clone NameB6Ng01-094L15
Chromosome11 (Build37)
Map Location 36,211,867 - 36,314,230
singlet/doubletdoublet
Overlap geneOdz2
Upstream geneSlit3, Pank3, LOC666733, AI595406, Rars, Wwc1, LOC636532
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094L15.bB6Ng01-094L15.g
ACCDH905868DH905869
length1,0361,124
definitionDH905868|Mus musculus domesticus DNA, BAC clone: B6Ng01-094L15, 5' end.DH905869|Mus musculus domesticus DNA, BAC clone: B6Ng01-094L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,313,180 - 36,314,230)(36,211,867 - 36,213,013)
sequence
gaattcaatactgagtcccatgacccacatctgtgaggtcaccatgggaa
cagtgggaggcacaatgaagtcagtagctggctacacactgacatttgaa
atccatatttttgaatgagtgtctctgctcttcacctgaaatctcataaa
tggtgcatatcatatggctgatgagagtccctcctttgggtgatggacga
gagttgggcaggcatttgggatctcgaatggcttcattttcagctatatt
gcccacttgcaaaaaagagtaatgatttttctgcactttggccaggtgac
ttggactctgtcagcggcaaaagaggtgctatttcaagatgaaaagtcta
ggagggtaaaaggcagaatgggttcatgttctccggtgcatgttagcaga
cttcctggaggatgctaacaaaggaaagagtgggccacagggcacatagg
gttaatagaggcagagggtgtaccgcctgcagcagagggcctggtccaga
gtagtgcaactttccagctgcctttctctgcatgggtccaggaagatggg
tggctgagccctgtgtgcttcagtggcagcccccataggtcagttcacag
agggcatgggtgctctccctacacccacaggtaaaggagcccaatcctta
gggttgccttgatggatttctcctgggcttctagtgtgccttgtagtttg
tagccaaagtagttctcaacagcatcctgtccacggtcccttctttagag
ccagaatcttctaaagttgtgggatgggatctaaggatgtggttttatgc
gtggtgcatttgtagtgacctgacgtttttgctggggtgacttgtctacc
acagaggcagttaatcagaaagggccatgggacttccaaaacacactgag
taattcactctactcgagtctctgggatccttttgatataaactcattac
aaagaactagtatgcatttaagtacacattcagcccgggcattttttttt
taataaaagcgatgtggtagctgatcagcattagat
gaattcagtgtctgttctaaatccccatcattttgtgagcattcttgcca
caatctcctggggtcaaagagacagaggatcatgtagaagatggctcaaa
agcaatccacttgctggggtattttcccaacagaatccagagatgtattt
tacttctgtcctctgaatatatagaaaaaaatttcactcccagatgaaaa
ttaagacccatatagatttatgcatccttagaggacttaactttatttaa
aggaaacatgtcaccatgttgaaacttaagctcaaattaattataataag
tgtaatatttggccagtctgagtctcatgattcaatgttcctgcttgatc
ggtttccagagctaaatgagggtctataaccattctcgatgtaataacac
cttttttttccttttatgactgctttcatctgtggatctcaaagcatggt
gcaaagagtaattaccatttacctgtgaggtaaggattcattcctggcct
catttggcaagtgcgatggaggagagggagaaggtagataatgcccaggg
agaaactggaatggtgggctctctatccccaccaggcttgcctgtgatct
caggaaactagtcatgctgtttgcaaagagaagtgttggcagacgggtgc
ataagctaaaatagcttctacctagctcagagtgatggtgaagaagataa
agaacactagggagtttccactcaagtccctagccaatctgaggagctat
acaaatgctttcctttctcttcctctccccttctgaccttgaactactgt
cttttccttcttccctctgtttttcctctgccccttctctgcttccctgt
ctttattctgtcttcgcaataattagtttatgactgtctaatacatgcta
tcctcactgtatagatgagggttatgagattttaaaacaacagcagcagc
aaaaaaaatcttgctttcttggagcttttatcttgagagaaagatagaca
aacttagtaatattctaattatgtaatcgaatgccgcttctggcttgatt
tctcttatatcctcacgaggaggtgtggttttatcaatagcctttatcaa
cagctctggtgggcatgaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_36313180_36314230
seq2: B6Ng01-094L15.b_48_1083 (reverse)

seq1  ATCTAAATGCTGAATCAGCTACCCACATCGCTTTTTATTAAAAAAAAAAT  50
      |||| ||||||| |||||||| ||||||||| ||||||||||||||||||
seq2  ATCT-AATGCTG-ATCAGCTA-CCACATCGC-TTTTATTAAAAAAAAAAT  46

seq1  GCCCGGGGCTGGAATGTGTACTTTAATGGCATACTAGTTTCTTTGGTTAA  100
      |||| ||||| |||||||||||| ||| ||||||||| |||||||  |||
seq2  GCCC-GGGCT-GAATGTGTACTTAAAT-GCATACTAG-TTCTTTG--TAA  90

seq1  TGAGTTTAATATTCAAAAAGGATCCCAGAAGACTCGAGTAGAGGTGAATT  150
      ||||||| ||||   ||||||||||||| ||||||||||||| |||||||
seq2  TGAGTTT-ATAT--CAAAAGGATCCCAG-AGACTCGAGTAGA-GTGAATT  135

seq1  ACTCAGTGTGTTTTGGAAGTCCCATGGCCCTTTCTGATTAACTGCCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTGTGTTTTGGAAGTCCCATGGCCCTTTCTGATTAACTGCCTCTG  185

seq1  TGGTAGACAAGTCACCCCAGCAAAAACGTCAGGTCACTACAAATGCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGACAAGTCACCCCAGCAAAAACGTCAGGTCACTACAAATGCACCA  235

seq1  CGCATAAAACCACATCCTTAGATCCCATCCCACAACTTTAGAAGATTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATAAAACCACATCCTTAGATCCCATCCCACAACTTTAGAAGATTCTG  285

seq1  GCTCTAAAGAAGGGACCGTGGACAGGATGCTGTTGAGAACTACTTTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAAAGAAGGGACCGTGGACAGGATGCTGTTGAGAACTACTTTGGCT  335

seq1  ACAAACTACAAGGCACACTAGAAGCCCAGGAGAAATCCATCAAGGCAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTACAAGGCACACTAGAAGCCCAGGAGAAATCCATCAAGGCAACC  385

seq1  CTAAGGATTGGGCTCCTTTACCTGTGGGTGTAGGGAGAGCACCCATGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGATTGGGCTCCTTTACCTGTGGGTGTAGGGAGAGCACCCATGCCC  435

seq1  TCTGTGAACTGACCTATGGGGGCTGCCACTGAAGCACACAGGGCTCAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAACTGACCTATGGGGGCTGCCACTGAAGCACACAGGGCTCAGCC  485

seq1  ACCCATCTTCCTGGACCCATGCAGAGAAAGGCAGCTGGAAAGTTGCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCTTCCTGGACCCATGCAGAGAAAGGCAGCTGGAAAGTTGCACTA  535

seq1  CTCTGGACCAGGCCCTCTGCTGCAGGCGGTACACCCTCTGCCTCTATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGACCAGGCCCTCTGCTGCAGGCGGTACACCCTCTGCCTCTATTAA  585

seq1  CCCTATGTGCCCTGTGGCCCACTCTTTCCTTTGTTAGCATCCTCCAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATGTGCCCTGTGGCCCACTCTTTCCTTTGTTAGCATCCTCCAGGAA  635

seq1  GTCTGCTAACATGCACCGGAGAACATGAACCCATTCTGCCTTTTACCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTAACATGCACCGGAGAACATGAACCCATTCTGCCTTTTACCCTC  685

seq1  CTAGACTTTTCATCTTGAAATAGCACCTCTTTTGCCGCTGACAGAGTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACTTTTCATCTTGAAATAGCACCTCTTTTGCCGCTGACAGAGTCCA  735

seq1  AGTCACCTGGCCAAAGTGCAGAAAAATCATTACTCTTTTTTGCAAGTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCTGGCCAAAGTGCAGAAAAATCATTACTCTTTTTTGCAAGTGGG  785

seq1  CAATATAGCTGAAAATGAAGCCATTCGAGATCCCAAATGCCTGCCCAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAGCTGAAAATGAAGCCATTCGAGATCCCAAATGCCTGCCCAACT  835

seq1  CTCGTCCATCACCCAAAGGAGGGACTCTCATCAGCCATATGATATGCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCCATCACCCAAAGGAGGGACTCTCATCAGCCATATGATATGCACC  885

seq1  ATTTATGAGATTTCAGGTGAAGAGCAGAGACACTCATTCAAAAATATGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGAGATTTCAGGTGAAGAGCAGAGACACTCATTCAAAAATATGGA  935

seq1  TTTCAAATGTCAGTGTGTAGCCAGCTACTGACTTCATTGTGCCTCCCACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATGTCAGTGTGTAGCCAGCTACTGACTTCATTGTGCCTCCCACT  985

seq1  GTTCCCATGGTGACCTCACAGATGTGGGTCATGGGACTCAGTATTGAATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCATGGTGACCTCACAGATGTGGGTCATGGGACTCAGTATTGAATT  1035

seq1  C  1051
      |
seq2  C  1036

seq1: chr11_36211867_36213013
seq2: B6Ng01-094L15.g_70_1193

seq1  GAATTCAGTGTCTGTTCTAAATCCCCATCATTTTGTGAGCATTCTTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTCTGTTCTAAATCCCCATCATTTTGTGAGCATTCTTGCCA  50

seq1  CAATCTCCTGGGGTCAAAGAGACAGAGGATCATGTAGAAGATGGCTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCCTGGGGTCAAAGAGACAGAGGATCATGTAGAAGATGGCTCAAA  100

seq1  AGCAATCCACTTGCTGGGGTATTTTCCCAACAGAATCCAGAGATGTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCCACTTGCTGGGGTATTTTCCCAACAGAATCCAGAGATGTATTT  150

seq1  TACTTCTGTCCTCTGAATATATAGAAAAAAATTTCACTCCCAGATGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTGTCCTCTGAATATATAGAAAAAAATTTCACTCCCAGATGAAAA  200

seq1  TTAAGACCCATATAGATTTATGCATCCTTAGAGGACTTAACTTTATTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACCCATATAGATTTATGCATCCTTAGAGGACTTAACTTTATTTAA  250

seq1  AGGAAACATGTCACCATGTTGAAACTTAAGCTCAAATTAATTATAATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACATGTCACCATGTTGAAACTTAAGCTCAAATTAATTATAATAAG  300

seq1  TGTAATATTTGGCCAGTCTGAGTCTCATGATTCAATGTTCCTGCTTGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATTTGGCCAGTCTGAGTCTCATGATTCAATGTTCCTGCTTGATC  350

seq1  GGTTTCCAGAGCTAAATGAGGGTCTATAACCATTCTCGATGTAATAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCAGAGCTAAATGAGGGTCTATAACCATTCTCGATGTAATAACAC  400

seq1  CTTTTTTTTCCTTTTATGACTGCTTTCATCTGTGGATCTCAAAGCATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTCCTTTTATGACTGCTTTCATCTGTGGATCTCAAAGCATGGT  450

seq1  GCAAAGAGTAATTACCATTTACCTGTGAGGTAAGGATTCATTCCTGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAGTAATTACCATTTACCTGTGAGGTAAGGATTCATTCCTGGCCT  500

seq1  CATTTGGCAAGTGCGATGGAGGAGAGGGAGAAGGTAGATAATGCCCAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGCAAGTGCGATGGAGGAGAGGGAGAAGGTAGATAATGCCCAGGG  550

seq1  AGAAACTGGAATGGTGGGCTCTCTATCCCCACCAGGCTTGCCTGTGATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTGGAATGGTGGGCTCTCTATCCCCACCAGGCTTGCCTGTGATCT  600

seq1  CAGGAAACTAGTCATGCTGTTTGCAAAGAGAAGTGTTGGCAGACGGGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAACTAGTCATGCTGTTTGCAAAGAGAAGTGTTGGCAGACGGGTGC  650

seq1  ATAAGCTAAAATAGCTTCTACCTAGCTCAGAGTGATGGTGAAGAAGATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTAAAATAGCTTCTACCTAGCTCAGAGTGATGGTGAAGAAGATAA  700

seq1  AGAACACTAGGGAGTTTCCACTCAAGTCCCTAGCCAATCTGAGGAGCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACTAGGGAGTTTCCACTCAAGTCCCTAGCCAATCTGAGGAGCTAT  750

seq1  ACAAATGCTTTCCTTTCTCTTCCTCTCCCCCTTCTGACCTTGAACTACTG  800
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACAAATGCTTTCCTTTCTCTTCCTCT-CCCCTTCTGACCTTGAACTACTG  799

seq1  TCTTTTCCTTCTTCCCTCTGTTTTTCCTCTGCCCCTTCTCTGCTTCCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCCTTCTTCCCTCTGTTTTTCCTCTGCCCCTTCTCTGCTTCCCTG  849

seq1  TCTTTATTCTGTCTTCGCAATAATTAGTTTATGACTGTCTAATACATGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTCTGTCTTCGCAATAATTAGTTTATGACTGTCTAATACATGCT  899

seq1  ATCCTCAACTGTATAGATGAGGGTTATGAGATTTTAAAAACAAACAAGCA  950
      |||||| |||||||||||||||||||||||||||| |||||||   ||| 
seq2  ATCCTC-ACTGTATAGATGAGGGTTATGAGATTTT-AAAACAA--CAGC-  944

seq1  AGCAAGCAAAAAAAAATCTTGCTTTCTTGGAGCTTTTATCTTGAGGAAGG  1000
      ||| ||| |||||||||||||||||||||||||||||||||||||  || 
seq2  AGC-AGC-AAAAAAAATCTTGCTTTCTTGGAGCTTTTATCTTGAG--AG-  989

seq1  AAAAGATAAAGACAAAACTAAGTAAATAATACTAAAATAATGTAAAAATC  1050
       ||||||  |||| ||||| ||    ||||| |  ||| ||||   ||||
seq2  -AAAGAT--AGAC-AAACTTAG----TAATATTCTAATTATGT---AATC  1028

seq1  AGAATGCAGC-TCTGGCTTGATTTCTC-TATAT-CTCACGAGGAAGGTGT  1097
       |||||| || |||||||||||||||| ||||| ||||||||| ||||||
seq2  -GAATGCCGCTTCTGGCTTGATTTCTCTTATATCCTCACGAGG-AGGTGT  1076

seq1  -GTGTTATCAATAAGGTCTTATCAACCAGCTCTGGTTGGCAATGAGGAGG  1146
       || |||||||| ||   ||||||| |||||||||| ||| |||||||||
seq2  GGTTTTATCAAT-AGCCTTTATCAA-CAGCTCTGGTGGGC-ATGAGGAGG  1123

seq1  A  1147
      |
seq2  A  1124