BAC Information

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BAC

Clone NameB6Ng01-094O01
Chromosome11 (Build37)
Map Location 73,083,344 - 73,260,230
singlet/doubletdoublet
Overlap geneTrpv3, Aspa, Spata22, Olfr20, Olfr376, Olfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1
Upstream geneFbxo39, LOC628100, Tekt1, D130058I21Rik, Ggt6, Mybbp1a, 9830002I17Rik, LOC432577, Ube2g1, Ankfy1, Cyb5d2, Zzef1, LOC627119, Atp2a3, P2rx1, LOC100043309, Camkk1, 1200014J11Rik, Itgae, Gsg2, P2rx5, Tmem93, Tax1bp3, Ctns, Carkl, Trpv1
Downstream geneOlfr380, Olfr381, Olfr382, Olfr383-ps1, Olfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094O01.bB6Ng01-094O01.g
ACCDH905973DH905974
length3081,055
definitionDH905973|Mus musculus domesticus DNA, BAC clone: B6Ng01-094O01, 5' end.DH905974|Mus musculus domesticus DNA, BAC clone: B6Ng01-094O01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,259,923 - 73,260,230)(73,083,344 - 73,084,400)
sequence
agcttaaactaacactgtcaatctgaattcagctacatcaaacactgtca
atctgcaacgatgcaagcagtcagaatgtattacatcatttcagaaaaag
ttgttgaggtctgttgacatctcttctgttttgtcagctttagaaatgtg
acagattcattagacagtgttgtccagaatcacagaatgacatgtctagg
gtgagtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgc
gcgcgcattcatgtgatttaggatacagtatggataaggttagagactaa
tcagggaa
gaattccttgcttcacacagactcaagactctgttatttggtgtggcctg
gtaacaggctgggtataattggagggacagccctgcatattcaggtgcct
ttgctgaggtcttgatgaccggtataggaagagggtctccttggaggagt
tggggggcactgaagcaagaacattcaggaagactcttggagggataaga
gttgctgaagccattcttgagaacaggagtaaagggtgggtgctattcta
ggtagtcaggatcctcaggtgggcatgtttttctctcacacacaagtggc
tttcaatatactgtggaatcaagtctgtgtaatgggatgtattgggaaag
cctgggaaggcagaaggcactgtgagatggattcagtattgtgcaaagta
gaacttgtatttacagaacttacagaataaagcatgttttgggaggcagc
aaaacaggaggctcctggcacccaaggaaggaggtagatgttttgggcta
aactggataaagaggatcatagctaaccagaatatgcctggtttgtcttg
tggccactgtcaattaacaagcgggggcacataatactttttggctgagt
ttttttcttttgagacagggtcttgctatttttctcaggctggtttagta
cttgatatagagccagaaagtctttgaactttggatcctttactttctga
gtgctgggatttcaggtgtgtagcaccacactcagttttcagctatttta
atggctgtgtgttttgtagggctttaagatgcacggcctggccaactgga
gggaaaatggaggttacaactgagatgactatagttgtgtcgagctgcac
ctgtatacgaggacactactaatgacatcgacttaaagacacagttattt
gccattatgctgacatgtggtgaacacagtcagggtgttcagtgctcagt
gtgtgtttttgattgtgtgagctcctgggactgggcaggctggagtgatt
ttgtcttccttcaagttgaggatatggatgaatgtggggacagagaacag
cttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_73259923_73260230
seq2: B6Ng01-094O01.b_56_363 (reverse)

seq1  TTCCCTTATTAGTCTCTAACATTATCCATTCTGTGTCCTAAATCACATGA  50
      |||||| ||||||||||||| |||||||| |||| |||||||||||||||
seq2  TTCCCTGATTAGTCTCTAACCTTATCCATACTGTATCCTAAATCACATGA  50

seq1  ATGGGCGCGCACACACACACAAACACACACACACACACACACACACACAC  100
      ||| ||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGCGCGCGCACACACACACACACACACACACACACACACACACACACAC  100

seq1  TCACTCACCCTAGACATGTCATTCTGTGATTCTGGACAACACTGTCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCACCCTAGACATGTCATTCTGTGATTCTGGACAACACTGTCTAAT  150

seq1  GAATCTGTCACATTTCTAAAGCTGACAAAACAGAAGAGATGTCAACAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGTCACATTTCTAAAGCTGACAAAACAGAAGAGATGTCAACAGAC  200

seq1  CTCAACAACTTTTTCTGAAATGATGTAATACATTCTGACTGCTTGCATCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAACTTTTTCTGAAATGATGTAATACATTCTGACTGCTTGCATCG  250

seq1  TTGCAGATTGACAGTGTTTGATGTAGCTGAATTCAGATTGACAGTGTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGATTGACAGTGTTTGATGTAGCTGAATTCAGATTGACAGTGTTAG  300

seq1  TTTAAGCT  308
      ||||||||
seq2  TTTAAGCT  308

seq1: chr11_73083344_73084400
seq2: B6Ng01-094O01.g_67_1121

seq1  GAATTCCTTGCTTCACACAGACTCAAGACTCTGTTATTTGGTGTGGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCTTCACACAGACTCAAGACTCTGTTATTTGGTGTGGCCTG  50

seq1  GTAACAGGCTGGGTATAATTGGAGGGACAGCCCTGCATATTCAGGTGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAGGCTGGGTATAATTGGAGGGACAGCCCTGCATATTCAGGTGCCT  100

seq1  TTGCTGAGGTCTTGATGACCGGTATAGGAAGAGGGTCTCCTTGGAGGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAGGTCTTGATGACCGGTATAGGAAGAGGGTCTCCTTGGAGGAGT  150

seq1  TGGGGGGCACTGAAGCAAGAACATTCAGGAAGACTCTTGGAGGGATAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGCACTGAAGCAAGAACATTCAGGAAGACTCTTGGAGGGATAAGA  200

seq1  GTTGCTGAAGCCATTCTTGAGAACAGGAGTAAAGGGTGGGTGCTATTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGAAGCCATTCTTGAGAACAGGAGTAAAGGGTGGGTGCTATTCTA  250

seq1  GGTAGTCAGGATCCTCAGGTGGGCATGTTTTTCTCTCACACACAAGTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTCAGGATCCTCAGGTGGGCATGTTTTTCTCTCACACACAAGTGGC  300

seq1  TTTCAATATACTGTGGAATCAAGTCTGTGTAATGGGATGTATTGGGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATATACTGTGGAATCAAGTCTGTGTAATGGGATGTATTGGGAAAG  350

seq1  CCTGGGAAGGCAGAAGGCACTGTGAGATGGATTCAGTATTGTGCAAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAAGGCAGAAGGCACTGTGAGATGGATTCAGTATTGTGCAAAGTA  400

seq1  GAACTTGTATTTACAGAACTTACAGAATAAAGCATGTTTTGGGAGGCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGTATTTACAGAACTTACAGAATAAAGCATGTTTTGGGAGGCAGC  450

seq1  AAAACAGGAGGCTCCTGGCACCCAAGGAAGGAGGTAGATGTTTTGGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGAGGCTCCTGGCACCCAAGGAAGGAGGTAGATGTTTTGGGCTA  500

seq1  AACTGGATAAAGAGGATCATAGCTAACCAGAATATGCCTGGTTTGTCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGATAAAGAGGATCATAGCTAACCAGAATATGCCTGGTTTGTCTTG  550

seq1  TGGCCACTGTCAATTAACAAGCGGGGGCACATAATAC-TTTTGGCTGAGT  599
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGGCCACTGTCAATTAACAAGCGGGGGCACATAATACTTTTTGGCTGAGT  600

seq1  TTTTTTCTTTTGAGACAGGGTCTTGCTATTTTTCTCAGGCTGGTTTAGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTTGAGACAGGGTCTTGCTATTTTTCTCAGGCTGGTTTAGTA  650

seq1  CTTGATATAGAGCCAGAAAGTC-TTGAACTTTGGATCCTTTACTTTCTGA  698
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTTGATATAGAGCCAGAAAGTCTTTGAACTTTGGATCCTTTACTTTCTGA  700

seq1  GTGCTGGGATTTCAGGTGTGTAGCACCACACTCAG-TTTCAGCTATTTCA  747
      ||||||||||||||||||||||||||||||||||| |||||||||||| |
seq2  GTGCTGGGATTTCAGGTGTGTAGCACCACACTCAGTTTTCAGCTATTTTA  750

seq1  ATGGCTGTGTGTTTTGTAGGGC-TTAAGATGCACGGCCTGGCCAACTGGA  796
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGGCTGTGTGTTTTGTAGGGCTTTAAGATGCACGGCCTGGCCAACTGGA  800

seq1  GGGAAAATGGAGGTTACAACTGAGATGACTATAGTTGTGTCGAGCTGCAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAATGGAGGTTACAACTGAGATGACTATAGTTGTGTCGAGCTGCAC  850

seq1  CTGTATACGAGGACACTACTAATGACATCGACTTAAAAGACACAGTTAAT  896
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  CTGTATACGAGGACACTACTAATGACATCGACTT-AAAGACACAGTTATT  899

seq1  TGCCATTATGCTGACAATGTGGTGAACACAGTCAGGGTGGTCAGTGCTCA  946
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  TGCCATTATGCTGAC-ATGTGGTGAACACAGTCAGGGTGTTCAGTGCTCA  948

seq1  GTGTGTGTTTTTGATTGTGTGGAGCTCCTGGGAGCTGGGCAGGGCTGGAG  996
      |||||||||||||||||||| |||||||||||| ||||||| ||||||||
seq2  GTGTGTGTTTTTGATTGTGT-GAGCTCCTGGGA-CTGGGCA-GGCTGGAG  995

seq1  TGGTTTTGTCTCACTTCCAAGTTGAGGATAT-GAAGGATGGTGGGACAGA  1045
      || ||||||||  ||| |||||||||||||| || | |||  ||||||||
seq2  TGATTTTGTCTTCCTT-CAAGTTGAGGATATGGATGAATGTGGGGACAGA  1044

seq1  GAACAGCCTTCT  1057
      |||||| |||||
seq2  GAACAG-CTTCT  1055