BAC Information

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BAC

Clone NameB6Ng01-094P14
Chromosome11 (Build37)
Map Location 5,713,811 - 5,714,495
singlet/doubletsinglet
Overlap genenone
Upstream geneNf2, Nipsnap1, Thoc5, Nefh, Ap1b1, Rasl10a, Gas2l1, Ewsr1, Rhbdd3, Emid1, Kremen1, Znrf3, LOC100042016, LOC382478, Xbp1, Ccdc117, LOC100041183, Ankrd36, LOC665181, Mrps24, 2010005J08Rik, 2210015D19Rik, Dbnl, Pgam2
Downstream genePolm, Aebp1, Pold2, Myl7, Gck, Ykt6, Camk2b, LOC100042156, Nudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094P14.bB6Ng01-094P14.g
ACCDH906040DH906041
length9211,179
definitionDH906040|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P14, 5' end.DH906041|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgtttcaccaatacatatgaaacaagttttgttttgttttgc
tttgcttttcagagctgaggaccaaacccagggccttgtgcttgctagac
aagcgctctaccactgagctaaatctccacccccattttttttttaagaa
tttttttgcttgcttgggtttttttgtttgttttgttttgtttctttttg
gtttttcaagacagggtttctctgtgtagccctggctgtcctggaactca
ctctgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcct
ccggagtgctgagattaaaggcgagcaccaccacacccggcctttgtttt
tgttttttcaagacaagcatttctctatgtagtcctggctgtacaggaat
tcgctctgtagaccaggctggcctcaacttgcgtctgcctctcaagttct
gggattaaagttgtgtgccaccaccacccaacttaagatttatttttatt
tcatgtgtatgagtgtttgcctgcatgtgtatatgtatgtattccacttg
catatagtgcctgtgggagctaggagatggtgttggagtccctggacagg
agttacagatggttgttaccatctggatatgggcgctgggaatcaaacct
gggtcctctgtaagaacacccagattctcttgaccactgggcatcttgcc
agcccacaaactgtttttgttttattgtagatgccttttatcaagttaaa
gaaattactctttatctctagattatttttaacatttaaaaagattatta
cactttcttgtgctgtgtgtagtcccatgcacgcacagtgcacacgtgga
cgtcagaagacagcttgggggttggttctctccaccttgtggggcgtggc
aacagatgccttgggttctct
gaattcctgccatgggtaattttttggtattttcttagactttattttcc
aagtgttcaggggttagttacttactccctgtgatcccttggggatgctt
atccttctcctctgactgaagcattcctcctactctcctctgtacatctg
gtttagggctcatcaattcctttcatctctttcacttttttttagttttg
ctgggtataataatatgggttgatggtttgggccttttagaacttagaat
gtgtctttccacttctggctttaaatttttctatgaaataatcagctgtc
attctggtgggtctatcttcaaaatttacctgatttacctgatcttggag
ctttcaataccctcactttattctgtgcttttaaggttttaaccataata
tatcatggagagtttcttttctgtctatgtggtaccctgaaggactctta
cacctggatgaataactcttttcccaggattgagaaatctttattgaaaa
tattctctacaccttcactatggttattctccatcttttatgctcattat
tataatgttgggtcttttcacaatgtcccaacattctcccgtgtttgatt
atttctaaatttctcattgacctttactgagtcatctaattcctctacct
tgtcttgtagtcctgatacttttttccacaggattcatcctgttgaagag
atttcccattgatttctcttaattttttttttttttttagttctaagaca
tttaagtttggatttttctgcaatttctttattaagttagttatcttgaa
ttgagttcagctgttcatttcaggtctttgttcttttggagtctactcct
atcctcctctgagttgttaaacacagtataataattctcttgaatttttg
tctggagacctgccagtcattcccactggagctcattactggggatagta
tagagggacatgtgagtagattttggtgtccctttatctctctgctggga
ctgccatctggagtaagttgttgctaagctctttttggtgtggaatgcaa
ccttaatctgaacagctcaggacagagagtctgaaagctgaaccatgcaa
aactcttctctgttggtcaatggaattccaatccacaacatcccatggac
tcatacacaagtgccagagagacgtctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_5713811_5714495
seq2: B6Ng01-094P14.b_46_730 (reverse)

seq1  GGTCAAGAGAATCTGGGTGTTCTTACAGAGGACCCAGGTTTGATTCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGAGAATCTGGGTGTTCTTACAGAGGACCCAGGTTTGATTCCCAG  50

seq1  CGCCCATATCCAGATGGTAACAACCATCTGTAACTCCTGTCCAGGGACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCATATCCAGATGGTAACAACCATCTGTAACTCCTGTCCAGGGACTC  100

seq1  CAACACCATCTCCTAGCTCCCACAGGCACTATATGCAAGTGGAATACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCATCTCCTAGCTCCCACAGGCACTATATGCAAGTGGAATACATA  150

seq1  CATATACACATGCAGGCAAACACTCATACACATGAAATAAAAATAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACACATGCAGGCAAACACTCATACACATGAAATAAAAATAAATCT  200

seq1  TAAGTTGGGTGGTGGTGGCACACAACTTTAATCCCAGAACTTGAGAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGGGTGGTGGTGGCACACAACTTTAATCCCAGAACTTGAGAGGCA  250

seq1  GACGCAAGTTGAGGCCAGCCTGGTCTACAGAGCGAATTCCTGTACAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCAAGTTGAGGCCAGCCTGGTCTACAGAGCGAATTCCTGTACAGCCA  300

seq1  GGACTACATAGAGAAATGCTTGTCTTGAAAAAACAAAAACAAAGGCCGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTACATAGAGAAATGCTTGTCTTGAAAAAACAAAAACAAAGGCCGGG  350

seq1  TGTGGTGGTGCTCGCCTTTAATCTCAGCACTCCGGAGGCAGAGGCAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGTGCTCGCCTTTAATCTCAGCACTCCGGAGGCAGAGGCAGGCA  400

seq1  GATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAG  450

seq1  CCAGGGCTACACAGAGAAACCCTGTCTTGAAAAACCAAAAAGAAACAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCTACACAGAGAAACCCTGTCTTGAAAAACCAAAAAGAAACAAAA  500

seq1  CAAAACAAACAAAAAAACCCAAGCAAGCAAAAAAATTCTTAAAAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAACAAAAAAACCCAAGCAAGCAAAAAAATTCTTAAAAAAAAAA  550

seq1  TGGGGGTGGAGATTTAGCTCAGTGGTAGAGCGCTTGTCTAGCAAGCACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTGGAGATTTAGCTCAGTGGTAGAGCGCTTGTCTAGCAAGCACAA  600

seq1  GGCCCTGGGTTTGGTCCTCAGCTCTGAAAAGCAAAGCAAAACAAAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGGTTTGGTCCTCAGCTCTGAAAAGCAAAGCAAAACAAAACAAA  650

seq1  ACTTGTTTCATATGTATTGGTGAAACACTGAATTC  685
      |||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTCATATGTATTGGTGAAACACTGAATTC  685