BAC Information

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BAC

Clone NameB6Ng01-094P24
Chromosome11 (Build37)
Map Location 31,867,767 - 32,032,822
singlet/doubletdoublet
Overlap gene4930524B15Rik, Nsg2, LOC669207
Upstream geneAsb3, Chac2, Stc2, 2310022M17Rik, Cpeb4
Downstream geneIl9r, 3300001G02Rik, Rhbdf1, Mpg, Mare, Hba-x, Hba-a1, F830116E18Rik, Hbq1, Sh3pxd2b, Ubtd2, 1700007I06Rik, Stk10, Fbxw11, LOC666616, 1700008A04Rik, LOC666620, LOC670035, LOC432548, Fgf18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094P24.bB6Ng01-094P24.g
ACCDH906057DH906058
length1,0861,136
definitionDH906057|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P24, 5' end.DH906058|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,867,767 - 31,868,395)(32,031,680 - 32,032,822)
sequence
gaattcagtgtgtatacaaggctgaccttgaactcatagagatctgcctg
cctctgcctcccaagtgctgagattaaagatatgtaccactatccccagc
tggcatatcccatttgcaaacagggataatcttatttccctcttattcat
tcttatgcctaccataatctttttgtctaattatactggctaatacctct
cgtgcaggatgaatggtgtagagataacagacaccttaccttgttcttat
tcttaggagaaatgcctctagtgtttcaccattaaataaagtactggttt
taggactaagactatatatttagaatatgaaaaagtatctctttctattt
tcttcagtgttttttatttattatgaataagctttaaattttgtcaaagg
cttactatgatctatgaagataataatatttttcttggaattagtaatgt
atagtgagatataaataggttttcaaatactgaatcaaccttacagtgtt
gaaataattttctcttgcttctgttgtattttttttaatatagtggtacc
tttaataatgagttgcttagaattttttattgatgttcatgagatatagt
gacctgtactttgtgtttctttacttgatttagattttgaagttagactt
atttcataaaagtaattgagagtttttcctttttttttctgtgttcaaga
ataatttatggaacattgaaactatgtggcttagaaaagtttgataaaat
ttcttttacaaaccatctgaacctcagttttgtggaataattttcttaat
aatgttctctgtggtgtagaaaccaagttctgtttaataactttcttgag
aaggtcagtttttggcagcatgcacttttcttagcaattaccccaccttc
atcctcagtcctccaaatgtgtttccactggagctctgcaaagtgatgag
ttttattttaaaagttcacctatacttttaatgggtcagttcacttctta
ataattttattcttctggttttgtgggtagggcattacttctccctctgt
attgaatgacaattagtattttggattaattttaaa
gaattcaggacctctgctcgctccggcccaaagatttatttattattata
tgtaagtacgtcagacacaccagaagagggcgtcagatctcattatggat
ggttgtgagccaccatgtggttgctgggatttgaactcagggcctctgga
agagcagtcagtgctcttaaccgctgagccatctctccagccccagatgc
ctgagaataaatctattaatgctcactagagaacattgttagaatttatt
agaaacttttaatctctgatacagagtgcttttgcacatttgcatcccac
tgacaatcaagatgggactgtgaggtagagattttaatctttttaattgt
tattttatgcgtgtgagtgttttgcctgcataccacatgcatgcagttcc
taaagaggccagaagagggcataggatactctgaaactgaagttatgggt
gtttgaacttccatatgggagttaggaatcaacctgagtcctagggaatg
gcagccagttctcttaaccactgagccatctctatagcctcatcctgtgg
ggttgtaaagaagtttagaagtaacatgtgcacctgcctcacttcttggg
gctgccccgtctgcccattcctgctcattctggttctaatcacagaaatc
acatgactgtggtaggaacccccaacagctaagaaggaaaatagaaacca
gctgcaagggctggtctgtgtccctgtgtacaggggctcactcccacatt
gctcttgaagcccccttcctttccttgccttcgagttccagtcaatgttg
gaataactactgggctagtagtttaaagtgcccaactgtatgtcaccatt
cacaagagacagaagacagaaatgtgtgaaagtctcagccatgctggatc
tgggctctgcctctggggcttgggccttgagaaggtttcactgcccttgt
ggctggcacgaagcccccagcctgttttcttagcagaaagctgctaactg
tgtggcagagcatggggagagaccttatacgctggagacaccattcctct
ctcttccattaatttttggttacctggtccctcactcaccccaaacaagc
tgggttgagagtgtcctgttgaccctccaaggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_31867767_31868395
seq2: B6Ng01-094P24.b_485_1136

seq1  TTGGAATTAGTAATGTATAGTGAGATATAAATAGGTTTTCAAATACTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTAGTAATGTATAGTGAGATATAAATAGGTTTTCAAATACTGAA  50

seq1  TCAACCTTACAGTGTTGAAATAATTTTCTCTTGCTTCTGTTGTATTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTTACAGTGTTGAAATAATTTTCTCTTGCTTCTGTTGTATTTTTT  100

seq1  TTAATATAGTGGTACCTTTAATAATGAGTTGCTTAGAATTTTTTATTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATAGTGGTACCTTTAATAATGAGTTGCTTAGAATTTTTTATTGAT  150

seq1  GTTCATGAGATATAGTGACCTGTACTTTGTGTTTCTTTACTTGATTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGAGATATAGTGACCTGTACTTTGTGTTTCTTTACTTGATTTAGA  200

seq1  TTTTGAAGTTAGACTTATTTCATAAAAGTAATTGAGAGTTTTTCCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGTTAGACTTATTTCATAAAAGTAATTGAGAGTTTTTCCTTTTT  250

seq1  TTTTCTGTGTTCAAGAATAATTTATGGAACATTGAAACTATGTGGCTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTGTTCAAGAATAATTTATGGAACATTGAAACTATGTGGCTTAG  300

seq1  -AAAGTTTGATAAAA-TTCTTTTACAAACCATCTGAACCTCAGTTTTGTG  348
       |||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTGATAAAATTTCTTTTACAAACCATCTGAACCTCAGTTTTGTG  350

seq1  GAATAA-TTTCTTAATAATGTTCTCTGTGGTGTAGAAACTA--GTCTGTT  395
      |||||| |||||||||||||||||||||||||||||||| |   ||||||
seq2  GAATAATTTTCTTAATAATGTTCTCTGTGGTGTAGAAACCAAGTTCTGTT  400

seq1  TA--TACTTTC-TGAG-AGGTCAG-TTTTGGCAGCATGCAC-TTTCTTAG  439
      ||   |||||| |||| ||||||| |||||||||||||||| ||||||||
seq2  TAATAACTTTCTTGAGAAGGTCAGTTTTTGGCAGCATGCACTTTTCTTAG  450

seq1  CAATTACAC--ACTTCAT-CTCAGT-CTCCAAATGTGTTTCCACT-GAGC  484
      ||||||| |   |||||| |||||| ||||||||||||||||||| ||||
seq2  CAATTACCCCACCTTCATCCTCAGTCCTCCAAATGTGTTTCCACTGGAGC  500

seq1  TCTGCAAAGTGATGAGTTTTAATTTTAAAAGTTCACCTATAC-TTTAAT-  532
      |||||||||||||||||||| ||||||||||||||||||||| |||||| 
seq2  TCTGCAAAGTGATGAGTTTT-ATTTTAAAAGTTCACCTATACTTTTAATG  549

seq1  GGTCAGTCCAC-TCTTAATAATTTGTTTC-TCT-GTTTTGTGTGTA-GGC  578
      ||||||| ||| ||||||||||||  ||| ||| |||||||| ||| |||
seq2  GGTCAGTTCACTTCTTAATAATTTTATTCTTCTGGTTTTGTGGGTAGGGC  599

seq1  ATTACTTTCTCCCTTTGTATTG-ATGAC-ATTAGTATTTT-GATTATTTT  625
      ||||| |||||||| ||||||| ||||| ||||||||||| ||||| |||
seq2  ATTAC-TTCTCCCTCTGTATTGAATGACAATTAGTATTTTGGATTAATTT  648

seq1  TAAA  629
      ||||
seq2  TAAA  652

seq1: chr11_32031680_32032822
seq2: B6Ng01-094P24.g_71_1206 (reverse)

seq1  CACTCCTTGGAGG---TACAGGACA--CTCAACCCAGC-TGTTT-GGGTG  43
      |||||||||||||    ||||||||  ||||||||||| ||||| |||||
seq2  CACTCCTTGGAGGGTCAACAGGACACTCTCAACCCAGCTTGTTTGGGGTG  50

seq1  AGTGAGGGGACCAGGTAACACAAAAATATAAGGAAGAGAGAGAATTGTTG  93
      ||||| ||||||||||||| |||||||  | ||||||||||| | || ||
seq2  AGTGA-GGGACCAGGTAAC-CAAAAATTAATGGAAGAGAGAGGAATGGTG  98

seq1  TCCTCCAGCCGTATTAAGTGTCCTCT-CCCATGCCTCTGGCCCACCACAG  142
      | |||||| ||||| | ||   |||| |||||| |||||  ||| |||||
seq2  T-CTCCAG-CGTATAAGGT---CTCTCCCCATG-CTCTG--CCA-CACAG  139

seq1  TTAGCAGCTTCTCTGGCTTAAGAAACAGGCCTGGGGGCTTCGTGCCAGCC  192
      |||||||||| ||| ||| |  ||||||| ||||||||||||||||||||
seq2  TTAGCAGCTT-TCT-GCTAAGAAAACAGG-CTGGGGGCTTCGTGCCAGCC  186

seq1  ACAAGGGCAGTGAAACCTTCTTCAAAGGCCAAGCCCCAGAGGCAGAGCCC  242
      |||||||||||||||||||| |||| | ||||||||||||||||||| ||
seq2  ACAAGGGCAGTGAAACCTTC-TCAAGGCCCAAGCCCCAGAGGCAGAG-CC  234

seq1  CAGATCCAGCATGGCTGAGACTTTCACACATTTCTGTCTTCTGTCTCCTG  292
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGATCCAGCATGGCTGAGACTTTCACACATTTCTGTCTTCTGTCTCTTG  284

seq1  TGAATGGTGACATACAGTTGGGCACTTTAAACTACTAG-CCAGTAGTTAT  341
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGAATGGTGACATACAGTTGGGCACTTTAAACTACTAGCCCAGTAGTTAT  334

seq1  TCCAACATTGACTGGAACTCGAAGGCAAGGAAAGGAAGGGGGCTTCAAGA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACATTGACTGGAACTCGAAGGCAAGGAAAGGAAGGGGGCTTCAAGA  384

seq1  GCAATGTGGGAGTGAGCCCCTGTACACAGGGACACAGACCAGCCCTTGCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTGGGAGTGAGCCCCTGTACACAGGGACACAGACCAGCCCTTGCA  434

seq1  GCTGGTTTCTATTTTCCTTCTTAGCTGTTGGGGGTTCCTACCACAGTCAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTTCTATTTTCCTTCTTAGCTGTTGGGGGTTCCTACCACAGTCAT  484

seq1  GTGATTTCTGTGATTAGAACCAGAATGAGCAGGAATGGGCAGACGGGGCA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCTGTGATTAGAACCAGAATGAGCAGGAATGGGCAGACGGGGCA  534

seq1  GCCCCAAGAAGTGAGGCAGGTGCACATGTTACTTCTAAACTTCTTTACAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAAGAAGTGAGGCAGGTGCACATGTTACTTCTAAACTTCTTTACAA  584

seq1  CCCCACAGGATGAGGCTATAGAGATGGCTCAGTGGTTAAGAGAACTGGCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAGGATGAGGCTATAGAGATGGCTCAGTGGTTAAGAGAACTGGCT  634

seq1  GCCATTCCCTAGGACTCAGGTTGATTCCTAACTCCCATATGGAAGTTCAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCCCTAGGACTCAGGTTGATTCCTAACTCCCATATGGAAGTTCAA  684

seq1  ACACCCATAACTTCAGTTTCAGAGTATCCTATGCCCTCTTCTGGCCTCTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCATAACTTCAGTTTCAGAGTATCCTATGCCCTCTTCTGGCCTCTT  734

seq1  TAGGAACTGCATGCATGTGGTATGCAGGCAAAACACTCACACGCATAAAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACTGCATGCATGTGGTATGCAGGCAAAACACTCACACGCATAAAA  784

seq1  TAACAATTAAAAAGATTAAAATCTCTACCTCACAGTCCCATCTTGATTGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATTAAAAAGATTAAAATCTCTACCTCACAGTCCCATCTTGATTGT  834

seq1  CAGTGGGATGCAAATGTGCAAAAGCACTCTGTATCAGAGATTAAAAGTTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGATGCAAATGTGCAAAAGCACTCTGTATCAGAGATTAAAAGTTT  884

seq1  CTAATAAATTCTAACAATGTTCTCTAGTGAGCATTAATAGATTTATTCTC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAATTCTAACAATGTTCTCTAGTGAGCATTAATAGATTTATTCTC  934

seq1  AGGCATCTGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCTGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT  984

seq1  CTTCCAGAGGCCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAGGCCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAA  1034

seq1  CCATCCATAATGAGATCTGACGCCCTCTTCTGGTGTGTCTGACGTACTTA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATAATGAGATCTGACGCCCTCTTCTGGTGTGTCTGACGTACTTA  1084

seq1  CATATAATAATAAATAAATCTTTGGGCCGGAGCGAGCAGAGGTCCTGAAT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATAATAAATAAATCTTTGGGCCGGAGCGAGCAGAGGTCCTGAAT  1134

seq1  TC  1143
      ||
seq2  TC  1136