BAC Information

Click to search

BAC

Clone NameB6Ng01-095B11
Chromosome11 (Build37)
Map Location 57,425,584 - 57,620,847
singlet/doubletdoublet
Overlap geneGalnt10, Sap30l
Upstream geneGria1, LOC667878, 1810073G14Rik, Mfap3
Downstream geneHand1, LOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755, Olfr320, LOC668058, Olfr319, Olfr318, Olfr317, Olfr316, Olfr315, Olfr314, 3100002J23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095B11.bB6Ng01-095B11.g
ACCDH906123DH906124
length536856
definitionDH906123|Mus musculus domesticus DNA, BAC clone: B6Ng01-095B11, 5' end.DH906124|Mus musculus domesticus DNA, BAC clone: B6Ng01-095B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,620,306 - 57,620,847)(57,425,584 - 57,426,437)
sequence
atttgaaggaaaaaaaaaaaaaaaaaaaaaaaaaacgaccaatatgaggg
tccagaatcctccattcacttcaaaacattcttagaaaacttttctaaaa
tgcttggtcaaagggattcagtctttatgaaatgacagcaatgctacagg
caaaagatatcaaaaagtaaggctggggagggccatagggagaggtgtgg
ggacacggctgagcttcccaggcctctccacacccgcagaccaaggccta
cctccttctactcgaagccgtgaagtgtgacgcagcaaatgctcagtgca
cactgggcacagttcctcgtcacaaagcccaagtgggaacactttggaag
ggaacgccgataaccttgaaagctcccttagtacacatggaaccttctgg
gcgacaagctgggatgcatggtcttatacagtgctctttaatttgggggc
acatcccaaaggatatgtggcaatgtgtgcagaacatgtttgcactgtca
caacaatgtcactggcctctagcaaggtgtgtgtgt
gaattctctatcatcgacttcataagctcgaatggtaggtcaggtagatg
gctacgactgatgagggttattatatgaactttgttcctgatgcttacac
agcatttcccagcccagggatggttttctcagtgacactcttggagagga
ccaatgctcagaccccggatatcagaaatgtgtgctatagtaagctgcta
agttcatgatggacttgttaaagggtgatttttaaaaagtggggctcgcc
gggcatggtggcacatgcctttaatcccagcacttgggaggcagaggcag
gcagatttctgagttcgaggccagcctggtctacagagtgagttacagga
cagccagagctacacagagaaaccctgcctcgaaaaaccaaaaaaaaaaa
aaaaaaatagtggggctggcaatgtgactctgtggtagactgcatgtgta
gcttgtacaagactctagttttcaacatacataccacacacacacataaa
tatatgcacacatatacatagcacacacatatgcatagatacacagacac
acacacacacacacacacacacacacacacacacacacacacacaccata
cacaccacacacagcaatagaaaggaaacacattgatgagcgccttgtca
aactcctaagcccttgacatctaaaacagactatgatacacacaggcagt
caaagatatttgtcgagttaattaacgcagcacagaatgggcatcaaatc
ttttgactcagacattttgatcctcttttcctttctttctcctcagcaca
ggctggacggccctggcactcacagcccttctgctctctggaagccacga
aggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57620306_57620847
seq2: B6Ng01-095B11.b_46_587 (reverse)

seq1  ACACACACACCTTGCTAGAGGCCAGTGACATTGTTGTGACAGTGCAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACCTTGCTAGAGGCCAGTGACATTGTTGTGACAGTGCAAACA  50

seq1  TGTTCTGCACACATTGCCACATATCCTTTGGGATGTGCCCCCAAATTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGCACACATTGCCACATATCCTTTGGGATGTGCCCCCAAATTAAA  100

seq1  GAGCACTGTATAAGACCATGCATCCCAGCTTGTCGCCCAGAAGGTTCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACTGTATAAGACCATGCATCCCAGCTTGTCGCCCAGAAGGTTCCAT  150

seq1  GTGTACTAAGGGAGCTTTCAAGGTTATCGGCGTTCCCTTCCAAAGTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTAAGGGAGCTTTCAAGGTTATCGGCGTTCCCTTCCAAAGTGTTC  200

seq1  CCACTTGGGCTTTGTGACGAGGAACTGTGCCCAGTGTGCACTGAGCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGGGCTTTGTGACGAGGAACTGTGCCCAGTGTGCACTGAGCATTT  250

seq1  GCTGCGTCACACTTCACGGCTTCGAGTAGAAGGAGGTAGGCCTTGGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCGTCACACTTCACGGCTTCGAGTAGAAGGAGGTAGGCCTTGGTCTG  300

seq1  CGGGTGTGGAGAGGCCTGGGAAGCTCAGCCGTGTCCCCACACCTCTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTGTGGAGAGGCCTGGGAAGCTCAGCCGTGTCCCCACACCTCTCCCT  350

seq1  ATGGCCCTCCCCAGCCTTACTTTCTGATATCTTTTGCCTGTAGCATTGCT  400
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGGCCCTCCCCAGCCTTACTTTTTGATATCTTTTGCCTGTAGCATTGCT  400

seq1  GTCATTTCATAAAGACTGAATCCCTTTGACCAAGCATTTTAGAAAAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTCATAAAGACTGAATCCCTTTGACCAAGCATTTTAGAAAAGTTT  450

seq1  TCTAAGAATGTTTTGAAGTGAATGGAGGATTCTGGACCCTCATATTGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAATGTTTTGAAGTGAATGGAGGATTCTGGACCCTCATATTGGTC  500

seq1  GTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTCAAATGAATTC  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTCAAATGAATTC  542

seq1: chr11_57425584_57426437
seq2: B6Ng01-095B11.g_71_926

seq1  GAATTCTCTATCATCGACTTCATAAGCTCGAATGGTAGGTCAGGTAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATCATCGACTTCATAAGCTCGAATGGTAGGTCAGGTAGATG  50

seq1  GCTACGACTGATGAGGGTTATTATATGAACTTTGTTCCTGATGCTTACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACGACTGATGAGGGTTATTATATGAACTTTGTTCCTGATGCTTACAC  100

seq1  AGCATTTCCCAGCCCAGGGATGGTTTTCTCAGTGACACTCTTGGAGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCCCAGCCCAGGGATGGTTTTCTCAGTGACACTCTTGGAGAGGA  150

seq1  CCAATGCTCAGACCCCGGATATCAGAAATGTGTGCTATAGTAAGCTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCTCAGACCCCGGATATCAGAAATGTGTGCTATAGTAAGCTGCTA  200

seq1  AGTTCATGATGGACTTGTTAAAGGGTGATTTTTAAAAAGTGGGGCTCGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATGATGGACTTGTTAAAGGGTGATTTTTAAAAAGTGGGGCTCGCC  250

seq1  GGGCATGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAG  300

seq1  GCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTACAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTACAGGA  350

seq1  CAGCCAGAGCTACACAGAGAAACCCTGCCTCGAAAAACCAAAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGAGCTACACAGAGAAACCCTGCCTCGAAAAACCAAAAAAAAAAA  400

seq1  AAAAAAATAGTGGGGCTGGCAATGTGACTCTGTGGTAGACTGCATGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAGTGGGGCTGGCAATGTGACTCTGTGGTAGACTGCATGTGTA  450

seq1  GCTTGTACAAGACTCTAGTTTTCAACATACATACCACACACACACATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTACAAGACTCTAGTTTTCAACATACATACCACACACACACATAAA  500

seq1  TATATGCACACATATACATAGCACACACATATGCATAGATACACAGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCACACATATACATAGCACACACATATGCATAGATACACAGACAC  550

seq1  ACACACACACACACACACACACACACACACACACACACACACACACCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACACACCATA  600

seq1  CACACCACACACAGCAATAGAAAGGAAACACATTGATGAGCGCCTTGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCACACACAGCAATAGAAAGGAAACACATTGATGAGCGCCTTGTCA  650

seq1  AACTCCTAAGCCCTTGACATCTAAAACAGACTATGATACACACAGGCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTAAGCCCTTGACATCTAAAACAGACTATGATACACACAGGCAGT  700

seq1  CAAAGATATTTGTCGAGTTAATTAACGCAGCACAGTAATGGCATCAAATC  750
      ||||||||||||||||||||||||||||||||||| |  |||||||||||
seq2  CAAAGATATTTGTCGAGTTAATTAACGCAGCACAGAATGGGCATCAAATC  750

seq1  TTTTGACTCAGACATTTTGATCCTCTTTCCTTTTCTTTCT-CTCAGTCAC  799
      |||||||||||||||||||||||||||| | ||||||||| ||||| |||
seq2  TTTTGACTCAGACATTTTGATCCTCTTTTCCTTTCTTTCTCCTCAG-CAC  799

seq1  AGGCT-GACGGCCCTGGCACTCACAGCCC-TCTGCTCTCTGGAGGCCACG  847
      ||||| ||||||||||||||||||||||| ||||||||||||| ||||||
seq2  AGGCTGGACGGCCCTGGCACTCACAGCCCTTCTGCTCTCTGGAAGCCACG  849

seq1  AGGGATG  854
      | |||||
seq2  AAGGATG  856