BAC Information

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BAC

Clone NameB6Ng01-095I24
Chromosome11 (Build37)
Map Location 60,108,051 - 60,269,149
singlet/doubletdoublet
Overlap geneTom1l2, LOC667892, Lrrc48, Atpaf2, 4933439F18Rik, LOC674310, Drg2
Upstream geneWnt9a, Gm249, 1110031B06Rik, Jmjd4, BC050078, LOC432565, Zkscan17, Nlrp3, Olfr222, LOC668157, Olfr223, GA_x5J8B7W3UM0-970645-971221, Olfr225, AA536749, 4933433K01Rik, Flcn, Cops3, Nt5m, Med9, Rasd1, Pemt, Rai1, Srebf1
Downstream geneMyo15, Alkbh5, LOC100042448, LOC624403, LOC624424, OTTMUSG00000007757, LOC668206, Llgl1, Flii, Smcr7, Top3a, LOC100042517, Smcr8, Shmt1, LOC625958, LOC637900, Dhrs7b, Tmem11, Gtlf3b, Map2k3, Kcnj12, LOC668228, Tnfrsf13b, Usp22, LOC668239, Aldh3a1, Aldh3a2, 4933429E10Rik, 1300013J15Rik, LOC100042602, LOC626150, Zfp179
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095I24.bB6Ng01-095I24.g
ACCDH906471DH906472
length1,053631
definitionDH906471|Mus musculus domesticus DNA, BAC clone: B6Ng01-095I24, 5' end.DH906472|Mus musculus domesticus DNA, BAC clone: B6Ng01-095I24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,268,121 - 60,269,149)(60,108,051 - 60,108,681)
sequence
gaattctgtttcaggtcttaccgaatccgcatgatagcagggacatggtt
gagactgaggacctcagctgtcctgccccaactccttccacccttctctg
actttatccttgcctcaggacctatgaacctgctgttgcctgaatttaag
tcagatcaatcccaccctgccattactgcctggaaaggtcacttagcctt
gtgcatccgaacaggaagggcagcagcactaactctgtcaccacatttct
tcaagactcgggaaagcaccaaggctagacactgcttggcagtcccacct
ctccactgatccccaaccctcacagtttgatgcttccttggtgttgtgta
tttggggtggtttactttaaatattaggtgatcactctggcaagggcttt
gcacatgtgaaccacaacagagcgggtgttatccctatccacagatgagg
acattgggtcgccaaaaactgacatgactttacaaggttacatagcaaga
acgtagtggacaaattctccagtccctacttccttgacactagctcgctg
gcgcctgcctgtctgccgggacaagctgttttgtgagatgtcttctcttg
cccttctcagcatgaaggcccagctgccaggaccctaggggaaaatctcc
gacactgcctttctgggtcacgggcttattgtgcgcgctgaggtttctct
acttgaacactgagtccagcacagatcagatctctcaagaaccctgaaat
cacgtcgctgaatgtgcccgctcccgcctcacgcacgcctcggcacttcc
ccggtgtttctccggcctcggtggtggcctccagttgtcccctcattttt
acagacaagaaaaacaaggaagggtagaaagggaggaccccttcgatccc
gccctttacccttgttcttctgcgtttcgagcgatctccttcttcgatct
ccgagattttctcaagatccccaatagttgcagcttcgcggagattcacg
ctgcctatagcttaacgcgcttgagcgctcccgtcttatggccgggaagc
caa
gaattcccttaaggggaatccacagatttaaaatgcatgtggggtgtgtt
ctccaggtgcagagtcactagtctgatgtattcctttctttgtactcaat
ggaatacgctatgtgtggagtaaatgagtacagaaaggagctagggaggg
ctgggatgcaaacatatggtggccatcaccacagctaccagctaccacca
ggagaaggggcccctgaagaagccagcaggctgggaggaggttgatcgct
tatcctagccaaacaggctgctctctcctgttgactgagaaaataaaagt
ctcctgggactcagtgttcaggtagagctctggctgaagcctagcagata
ccttggtgttgggggtgggggacatcccactgtgggtcatgtgttagact
gtgatgggaatagcaagtcaagacagaacctttgcctcagggagtttagc
cagatcacagacttacaagcagagagctaggacaccaggaacaaatgtta
gccaagaggtgcgctcttaacctgacagtccaaagaatgaagaatgatta
gcaatgatgacagagggagagggggtacaaacaaggtagaagagcagaac
tcggaggatgaggaggatggaggagtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_60268121_60269149
seq2: B6Ng01-095I24.b_48_1083 (reverse)

seq1  AGACGTGAGCGCTC-AGCGCTGTAAGCTATAGGCAGCGTGAATCTCCGCC  49
      ||||| |||||||| |||||  |||||||||||||||||||||||||| |
seq2  AGACGGGAGCGCTCAAGCGCGTTAAGCTATAGGCAGCGTGAATCTCCG-C  49

seq1  GAAGCTGCAACTA-TGGGGATCTTGGAGAAAATCTCGGAGATCG-AGAAG  97
      ||||||||||||| |||||||||| ||||||||||||||||||| |||||
seq2  GAAGCTGCAACTATTGGGGATCTT-GAGAAAATCTCGGAGATCGAAGAAG  98

seq1  GAGATCGCTCG-AACGCAGAAGAACAAGGGT-AAGGGCGGGATCGGAGGG  145
      ||||||||||| ||||||||||||||||||| ||||||||||||| ||||
seq2  GAGATCGCTCGAAACGCAGAAGAACAAGGGTAAAGGGCGGGATCGAAGGG  148

seq1  GT-CTCCCTTTCTACCC-TCCTTGTTTTTCTTGTCTGT-AAAATGAGGGG  192
      || |||||||||||||| |||||||||||||||||||| |||||||||||
seq2  GTCCTCCCTTTCTACCCTTCCTTGTTTTTCTTGTCTGTAAAAATGAGGGG  198

seq1  ACAACTGGA-GCCACCACCGAGGCCGGAGAAACACCGGGGAAGTGCCGAG  241
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGGAGGCCACCACCGAGGCCGGAGAAACACCGGGGAAGTGCCGAG  248

seq1  GCGTGCGTGAGGCGGGAGCGGGCACATTCAGCGACGTGATTTCAGGGTTC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCGTGAGGCGGGAGCGGGCACATTCAGCGACGTGATTTCAGGGTTC  298

seq1  TTGAGAGATCTGATCTGTGCTGGACTCAGTGTTCAAGTAGAGAAACCTCA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGATCTGATCTGTGCTGGACTCAGTGTTCAAGTAGAGAAACCTCA  348

seq1  GCGCGCACAATAAGCCCGTGACCCAGAAAGGCAGTGTCGGAGATTTTCCC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGCACAATAAGCCCGTGACCCAGAAAGGCAGTGTCGGAGATTTTCCC  398

seq1  CTAGGGTCCTGGCAGCTGGGCCTTCATGCTGAGAAGGGCAAGAGAAGACA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTCCTGGCAGCTGGGCCTTCATGCTGAGAAGGGCAAGAGAAGACA  448

seq1  TCTCACAAAACAGCTTGTCCCGGCAGACAGGCAGGCGCCAGCGAGCTAGT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAAAACAGCTTGTCCCGGCAGACAGGCAGGCGCCAGCGAGCTAGT  498

seq1  GTCAAGGAAGTAGGGACTGGAGAATTTGTCCACTACGTTCTTGCTATGTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGAAGTAGGGACTGGAGAATTTGTCCACTACGTTCTTGCTATGTA  548

seq1  ACCTTGTAAAGTCATGTCAGTTTTTGGCGACCCAATGTCCTCATCTGTGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTAAAGTCATGTCAGTTTTTGGCGACCCAATGTCCTCATCTGTGG  598

seq1  ATAGGGATAACACCCGCTCTGTTGTGGTTCACATGTGCAAAGCCCTTGCC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGATAACACCCGCTCTGTTGTGGTTCACATGTGCAAAGCCCTTGCC  648

seq1  AGAGTGATCACCTAATATTTAAAGTAAACCACCCCAAATACACAACACCA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGATCACCTAATATTTAAAGTAAACCACCCCAAATACACAACACCA  698

seq1  AGGAAGCATCAAACTGTGAGGGTTGGGGATCAGTGGAGAGGTGGGACTGC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCATCAAACTGTGAGGGTTGGGGATCAGTGGAGAGGTGGGACTGC  748

seq1  CAAGCAGTGTCTAGCCTTGGTGCTTTCCCGAGTCTTGAAGAAATGTGGTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGTGTCTAGCCTTGGTGCTTTCCCGAGTCTTGAAGAAATGTGGTG  798

seq1  ACAGAGTTAGTGCTGCTGCCCTTCCTGTTCGGATGCACAAGGCTAAGTGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTTAGTGCTGCTGCCCTTCCTGTTCGGATGCACAAGGCTAAGTGA  848

seq1  CCTTTCCAGGCAGTAATGGCAGGGTGGGATTGATCTGACTTAAATTCAGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCAGGCAGTAATGGCAGGGTGGGATTGATCTGACTTAAATTCAGG  898

seq1  CAACAGCAGGTTCATAGGTCCTGAGGCAAGGATAAAGTCAGAGAAGGGTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCAGGTTCATAGGTCCTGAGGCAAGGATAAAGTCAGAGAAGGGTG  948

seq1  GAAGGAGTTGGGGCAGGACAGCTGAGGTCCTCAGTCTCAACCATGTCCCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGTTGGGGCAGGACAGCTGAGGTCCTCAGTCTCAACCATGTCCCT  998

seq1  GCTATCATGCGGATTCGGTAAGACCTGAAACAGAATTC  1029
      ||||||||||||||||||||||||||||||||||||||
seq2  GCTATCATGCGGATTCGGTAAGACCTGAAACAGAATTC  1036

seq1: chr11_60108051_60108681
seq2: B6Ng01-095I24.g_67_697

seq1  GAATTCCCTTAAGGGGAATCCACAGATTTAAAATGCATGTGGGGTGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTAAGGGGAATCCACAGATTTAAAATGCATGTGGGGTGTGTT  50

seq1  CTCCAGGTGCAGAGTCACTAGTCTGATGTATTCCTTTCTTTGTACTCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGTGCAGAGTCACTAGTCTGATGTATTCCTTTCTTTGTACTCAAT  100

seq1  GGAATACGCTATGTGTGGAGTAAATGAGTACAGAAAGGAGCTAGGGAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACGCTATGTGTGGAGTAAATGAGTACAGAAAGGAGCTAGGGAGGG  150

seq1  CTGGGATGCAAACATATGGTGGCCATCACCACAGCTACCAGCTACCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATGCAAACATATGGTGGCCATCACCACAGCTACCAGCTACCACCA  200

seq1  GGAGAAGGGGCCCCTGAAGAAGCCAGCAGGCTGGGAGGAGGTTGATCGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGGGGCCCCTGAAGAAGCCAGCAGGCTGGGAGGAGGTTGATCGCT  250

seq1  TATCCTAGCCAAACAGGCTGCTCTCTCCTGTTGACTGAGAAAATAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAGCCAAACAGGCTGCTCTCTCCTGTTGACTGAGAAAATAAAAGT  300

seq1  CTCCTGGGACTCAGTGTTCAGGTAGAGCTCTGGCTGAAGCCTAGCAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGGACTCAGTGTTCAGGTAGAGCTCTGGCTGAAGCCTAGCAGATA  350

seq1  CCTTGGTGTTGGGGGTGGGGGACATCCCACTGTGGGTCATGTGTTAGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTGTTGGGGGTGGGGGACATCCCACTGTGGGTCATGTGTTAGACT  400

seq1  GTGATGGGAATAGCAAGTCAAGACAGAACCTTTGCCTCAGGGAGTTTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGGAATAGCAAGTCAAGACAGAACCTTTGCCTCAGGGAGTTTAGC  450

seq1  CAGATCACAGACTTACAAGCAGAGAGCTAGGACACCAGGAACAAATGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCACAGACTTACAAGCAGAGAGCTAGGACACCAGGAACAAATGTTA  500

seq1  GCCAAGAGGTGCGCTCTTAACCTGACAGTCCAAAGAATGAAGAATGATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAGGTGCGCTCTTAACCTGACAGTCCAAAGAATGAAGAATGATTA  550

seq1  GCAATGATGACAGAGGGAGAGGGGGTACAAACAAGGTAGAAGAGCAGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGATGACAGAGGGAGAGGGGGTACAAACAAGGTAGAAGAGCAGAAC  600

seq1  TCGGAGGATGAGGAGGATGGAGGAGTGGGGG  631
      |||||||||||||||||||||||||||||||
seq2  TCGGAGGATGAGGAGGATGGAGGAGTGGGGG  631