BAC Information

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BAC

Clone NameB6Ng01-097M01
Chromosome11 (Build37)
Map Location 11,554,749 - 11,701,723
singlet/doubletdoublet
Overlap geneIkzf1, Fignl1
Upstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik
Downstream geneDdc, Grb10, Cobl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097M01.bB6Ng01-097M01.g
ACCDH908036DH908037
length1,134304
definitionDH908036|Mus musculus domesticus DNA, BAC clone: B6Ng01-097M01, 5' end.DH908037|Mus musculus domesticus DNA, BAC clone: B6Ng01-097M01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,700,589 - 11,701,723)(11,554,749 - 11,555,052)
sequence
gaattctgctctttggccctccagggactggtaaaactctgattggcaag
tgcattgctagccagtctggagcaacattcttcagcatctctgcttcatc
gttgacttctaagtgggtaggtgagggagaaaaaatggtccgtgcactgt
ttgctgttgccaggtgtcagcagccagctgtcatatttattgatgaaatt
gattctttattgtctcaacgaggagatggtgaacatgaatcttcaagaag
gataaaaacggaatttttagttcagttagatggagcaaccacatcttctg
aagaccggattcttgtggtgggagctacaaatcggccccaagagattgat
gaagctgcccggagaagattggtgaaaagactttatattcccctcccaga
agcttcagccaggaaacagatagtaggtaatctaatgtctaaggagcaat
gttgtctcagtgatgaagaaactgatctggtagtgcagcagtctgatggg
ttttctggcgcagatatgacacagctttgcagagaggcttctcttggtcc
tattcgcagtttgcacgctgctgacattgctaccataagtccagatcaag
ttcgaccaatagcttatattgattttgaaaatgcttttaaaactgtgcga
cctactgtatctccaaaagacttggagctttatgaaaactggaatgaaac
atttggttgtggaaagtgaatatagcgattgaaaggagaagctgttatct
agtagtcgtctttacctttagcctcggaagcttgctgtgctacttgtatt
gttttggagtatatcctgaattctgtgcctcagattagaatgataacagc
ttgactactgactgatatattagtatgttgtatttgccttccagttatat
aatatataaactcatttcatttaaatagaatgaccttttgtttctaagtg
aattcaaattagaactttagtctggtaataataaactttgttagtgtagt
attattaatgctttacattgaaaccaccattggcattcttgactagaagt
aagatcttacccaaagctgagtgaagcacagggagtaacctaccggtatc
ccgtgctggcttgtacctgtttgtggggcctttt
agagacatttattaatgaatgcatagcaagtattgaccatttgaggtgca
ggccaatgattgccggcaggccagaagcgctgatgtacacaagatgagct
ctgctggggagatgctacaaaagaggagcctgtgagactacaggaagtag
aacaagggcaggagaggctccacagatgacttctgcactggacctggtca
accgctggtcatgggaagtaaaggaaaggtccaggtgattctagatttgc
caacctctaggaataataggagtgagtgagtgtgtgtgtgggagtgcatc
tgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_11700589_11701723
seq2: B6Ng01-097M01.b_41_1174 (reverse)

seq1  AAAAGCCCACAAAACAAGTTACAAGCCAGCACGGGTTA-CGGTAGTTTAC  49
      ||||| || || ||  || |||||||||||||||| || |||||| ||||
seq2  AAAAGGCCCCACAAACAGGTACAAGCCAGCACGGGATACCGGTAGGTTAC  50

seq1  TCCCTGTTGCTTTCACTCTAGCTTTTGGTAAGATCTTAACTCTAAGTCAA  99
      |||||| ||| ||||||| |||||| ||||||||||||  ||| ||||||
seq2  TCCCTG-TGC-TTCACTC-AGCTTTGGGTAAGATCTTACTTCT-AGTCAA  96

seq1  GAATG-CAATGCTGTTTCAAATGT-AAGCAATAATAATACTACACTAACA  147
      ||||| ||||| || ||  ||||| ||||| |||||||||||||||||||
seq2  GAATGCCAATGGTGGTTTCAATGTAAAGCATTAATAATACTACACTAACA  146

seq1  AAGTTTATTATTACCAGACTAAAGTTCTAATTTGAATTCACTTAGAAACA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTATTATTACCAGACTAAAGTTCTAATTTGAATTCACTTAGAAACA  196

seq1  AAAGGTCATTCTATTTAAATGAAATGAGTTTATATATTATATAACTGGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTCATTCTATTTAAATGAAATGAGTTTATATATTATATAACTGGAA  246

seq1  GGCAAATACAACATACTAATATATCAGTCAGTAGTCAAGCTGTTATCATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATACAACATACTAATATATCAGTCAGTAGTCAAGCTGTTATCATT  296

seq1  CTAATCTGAGGCACAGAATTCAGGATATACTCCAAAACAATACAAGTAGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTGAGGCACAGAATTCAGGATATACTCCAAAACAATACAAGTAGC  346

seq1  ACAGCAAGCTTCCGAGGCTAAAGGTAAAGACGACTACTAGATAACAGCTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAGCTTCCGAGGCTAAAGGTAAAGACGACTACTAGATAACAGCTT  396

seq1  CTCCTTTCAATCGCTATATTCACTTTCCACAACCAAATGTTTCATTCCAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCAATCGCTATATTCACTTTCCACAACCAAATGTTTCATTCCAG  446

seq1  TTTTCATAAAGCTCCAAGTCTTTTGGAGATACAGTAGGTCGCACAGTTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAAAGCTCCAAGTCTTTTGGAGATACAGTAGGTCGCACAGTTTT  496

seq1  AAAAGCATTTTCAAAATCAATATAAGCTATTGGTCGAACTTGATCTGGAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATTTTCAAAATCAATATAAGCTATTGGTCGAACTTGATCTGGAC  546

seq1  TTATGGTAGCAATGTCAGCAGCGTGCAAACTGCGAATAGGACCAAGAGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTAGCAATGTCAGCAGCGTGCAAACTGCGAATAGGACCAAGAGAA  596

seq1  GCCTCTCTGCAAAGCTGTGTCATATCTGCGCCAGAAAACCCATCAGACTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCTGCAAAGCTGTGTCATATCTGCGCCAGAAAACCCATCAGACTG  646

seq1  CTGCACTACCAGATCAGTTTCTTCATCACTGAGACAACATTGCTCCTTAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTACCAGATCAGTTTCTTCATCACTGAGACAACATTGCTCCTTAG  696

seq1  ACATTAGATTACCTACTATCTGTTTCCTGGCTGAAGCTTCTGGGAGGGGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGATTACCTACTATCTGTTTCCTGGCTGAAGCTTCTGGGAGGGGA  746

seq1  ATATAAAGTCTTTTCACCAATCTTCTCCGGGCAGCTTCATCAATCTCTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGTCTTTTCACCAATCTTCTCCGGGCAGCTTCATCAATCTCTTG  796

seq1  GGGCCGATTTGTAGCTCCCACCACAAGAATCCGGTCTTCAGAAGATGTGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGATTTGTAGCTCCCACCACAAGAATCCGGTCTTCAGAAGATGTGG  846

seq1  TTGCTCCATCTAACTGAACTAAAAATTCCGTTTTTATCCTTCTTGAAGAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCATCTAACTGAACTAAAAATTCCGTTTTTATCCTTCTTGAAGAT  896

seq1  TCATGTTCACCATCTCCTCGTTGAGACAATAAAGAATCAATTTCATCAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTCACCATCTCCTCGTTGAGACAATAAAGAATCAATTTCATCAAT  946

seq1  AAATATGACAGCTGGCTGCTGACACCTGGCAACAGCAAACAGTGCACGGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGACAGCTGGCTGCTGACACCTGGCAACAGCAAACAGTGCACGGA  996

seq1  CCATTTTTTCTCCCTCACCTACCCACTTAGAAGTCAACGATGAAGCAGAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTTCTCCCTCACCTACCCACTTAGAAGTCAACGATGAAGCAGAG  1046

seq1  ATGCTGAAGAATGTTGCTCCAGACTGGCTAGCAATGCACTTGCCAATCAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAAGAATGTTGCTCCAGACTGGCTAGCAATGCACTTGCCAATCAG  1096

seq1  AGTTTTACCAGTCCCTGGAGGGCCAAAGAGCAGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACCAGTCCCTGGAGGGCCAAAGAGCAGAATTC  1134

seq1: chr11_11554749_11555052
seq2: B6Ng01-097M01.g_77_380

seq1  AGAGACATTTATTAATGAATGCATAGCAAGTATTGACCATTTGAGGTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACATTTATTAATGAATGCATAGCAAGTATTGACCATTTGAGGTGCA  50

seq1  GGCCAATGATTGCCGGCAGGCCAGAAGCGCTGATGTACACAAGATGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATGATTGCCGGCAGGCCAGAAGCGCTGATGTACACAAGATGAGCT  100

seq1  CTGCTGGGGAGATGCTACAAAAGAGGAGCCTGTGAGACTACAGGAAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGGGAGATGCTACAAAAGAGGAGCCTGTGAGACTACAGGAAGTAG  150

seq1  AACAAGGGCAGGAGAGGCTCCACAGATGACTTCTGCACTGGACCTGGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGGCAGGAGAGGCTCCACAGATGACTTCTGCACTGGACCTGGTCA  200

seq1  ACCGCTGGTCATGGGAAGTAAAGGAAAGGTCCAGGTGATTCTAGATTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCTGGTCATGGGAAGTAAAGGAAAGGTCCAGGTGATTCTAGATTTGC  250

seq1  CAACCTCTAGGAATAATAGGAGTGAGTGAGTGTGTGTGTGGGAGTGCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCTAGGAATAATAGGAGTGAGTGAGTGTGTGTGTGGGAGTGCATC  300

seq1  TGAA  304
      ||||
seq2  TGAA  304