BAC Information

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BAC

Clone NameB6Ng01-098C01
Chromosome11 (Build37)
Map Location 24,213,701 - 24,363,198
singlet/doubletdoublet
Overlap genenone
Upstream geneAhsa2, 1700093K21Rik, A730027B03Rik, 0610010F05Rik, Pex13, 4933435A13Rik, Rel, Papolg, A830031A19Rik, LOC100042256, Bcl11a
Downstream geneLOC100042282
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098C01.bB6Ng01-098C01.g
ACCDH908306DH908307
length562885
definitionDH908306|Mus musculus domesticus DNA, BAC clone: B6Ng01-098C01, 5' end.DH908307|Mus musculus domesticus DNA, BAC clone: B6Ng01-098C01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,362,666 - 24,363,198)(24,213,701 - 24,214,585)
sequence
gaattccaaactgaaaaacagtttaatgtatcctatctgtcctaagtagc
tttctgttgctatgataaattactgatcaaaaacaatttggggaggaaga
ggtttattttaggatctcaagatgcaaacttggaggcagaaactgagcag
aaaccatggaagaaaactgcttgctaactttctattcatggcttgctcag
tttgctttcttatatagcccacaaccacccacccaggggtagtactactc
acagtggaccagaccctctcatatcaatcattgatcaagagactatcccc
acagacatggccacaggctaacgccatgaacataattcctcagttgtgct
ccctcttcccagatgattcaattttgtctgaagttgataaaaagtaatca
gtacatgtgacaccttgtcaactccactaacaagtcactgtgaagccatt
tacttgattttcttgtttaccccaagatctcccgttactagcacaatata
aaacataatgtaattgtcaaaagtctataaaaaaatcgaacactgtgtaa
gtaccacatctc
gaattctaattaattccaatctgaacatgtccaagaggaatgctccggca
accccacttctgagtaaaacaaaacaaaaataacccttggataatgcttc
agattgcatgggaaattaagaaacgcttctcgaccggcatagtctaggat
gccttattaaatggtgaaagaaatccccccaagagactggggcacttgtc
ttttcaagtacacactgcaaaaagcttatggttgtgggagtggtccttaa
ctcagtgaggggttggagaagaagggggccaagggatcccactgctccat
caaaggtctaaaggccagctccttgctctagccttttaagttctgtcaca
gggcatgggaggctttgaaagatttgtggttgctccccctttattatttt
atatttatttttttgccttttagcatatcgttgggaccagttccattgtc
ttgtctgttacttcttgttctggttttccatccttttcctgactgtacac
tcagcttctctcctacccagggcccctgggtggcaggctgccagggcaga
gtcttctatcaaatgtgcccaaagcatgccaggtgtgtctgattaagccc
tagatgccacaaggctagagggatatttgggtattggaatacaattttca
actggaagagtgaaccatttgattgaacccatggctaattttataagagt
cagaacagaagaaaccaaaataaaagcaccaggggctaacatttgtcact
ggcctgttacagaccagctattgtgctaaattcttcacctggatcatctc
cattctcaaaatcactctgaagtaggcaaagactcttagattacacaagt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_24362666_24363198
seq2: B6Ng01-098C01.b_41_573 (reverse)

seq1  TTTTTATAGACTTTTGACAATTACATTATGTTTTATATTGTGCTAGTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAGACTTTTGACAATTACATTATGTTTTATATTGTGCTAGTAAC  50

seq1  GGGAGATCTTGGGGTAAACAAGAAAATAAAGTAAATGGCTTCACAGTGAC  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGGAGATCTTGGGGTAAACAAGAAAATCAAGTAAATGGCTTCACAGTGAC  100

seq1  TTGTTAGTGGAGTTGACAAGGTGTCACATGTACTGATTACTTTTTATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTGGAGTTGACAAGGTGTCACATGTACTGATTACTTTTTATCAA  150

seq1  CTTCAGACAAAATTGAATCATCTGGGAAGAGGGAGCACAACTGAGGAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGACAAAATTGAATCATCTGGGAAGAGGGAGCACAACTGAGGAATT  200

seq1  ATGTTCATGGCGTTAGCCTGTGGCCATGTCTGTGGGGATAGTCTCTTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATGGCGTTAGCCTGTGGCCATGTCTGTGGGGATAGTCTCTTGAT  250

seq1  CAATGATTGATATGAGAGGGTCTGGTCCACTGTGAGTAGTACTACCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATTGATATGAGAGGGTCTGGTCCACTGTGAGTAGTACTACCCCTG  300

seq1  GGTGGGTGGTTGTGGGCTATATAAGAAAGCAAACTGAGCAAGCCATGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTGGTTGTGGGCTATATAAGAAAGCAAACTGAGCAAGCCATGAAT  350

seq1  AGAAAGTTAGCAAGCAGTTTTCTTCCATGGTTTCTGCTCAGTTTCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTTAGCAAGCAGTTTTCTTCCATGGTTTCTGCTCAGTTTCTGCCT  400

seq1  CCAAGTTTGCATCTTGAGATCCTAAAATAAACCTCTTCCTCCCCAAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTTGCATCTTGAGATCCTAAAATAAACCTCTTCCTCCCCAAATTG  450

seq1  TTTTTGATCAGTAATTTATCATAGCAACAGAAAGCTACTTAGGACAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGATCAGTAATTTATCATAGCAACAGAAAGCTACTTAGGACAGATA  500

seq1  GGATACATTAAACTGTTTTTCAGTTTGGAATTC  533
      |||||||||||||||||||||||||||||||||
seq2  GGATACATTAAACTGTTTTTCAGTTTGGAATTC  533

seq1: chr11_24213701_24214585
seq2: B6Ng01-098C01.g_66_950

seq1  GAATTCTAATTAATTCCAATCTGAACATGTCCAAGAGGAATGCTCCGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTAATTCCAATCTGAACATGTCCAAGAGGAATGCTCCGGCA  50

seq1  ACCCCACTTCTGAGTAAAACAAAACAAAAATAACCCTTGGATAATGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACTTCTGAGTAAAACAAAACAAAAATAACCCTTGGATAATGCTTC  100

seq1  AGATTGCATGGGAAATTAAGAAACGCTTCTCGACCGGCATAGTCTAGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCATGGGAAATTAAGAAACGCTTCTCGACCGGCATAGTCTAGGAT  150

seq1  GCCTTATTAAATGGTGAAAGAAATCCCCCCAAGAGACTGGGGCACTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATTAAATGGTGAAAGAAATCCCCCCAAGAGACTGGGGCACTTGTC  200

seq1  TTTTCAGGTACACACTGCAAAAAGCTTATGGTTGTGGGAGTGGTCCTTAA  250
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGTACACACTGCAAAAAGCTTATGGTTGTGGGAGTGGTCCTTAA  250

seq1  CTCAGTGAGGGGTTGGAGAAGAAGGGGGCCAAGGGATCCCACTGCTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGAGGGGTTGGAGAAGAAGGGGGCCAAGGGATCCCACTGCTCCAT  300

seq1  CAAAGGTCTAAAGGCCAGCTCCTTGCTCTAGCCTTTTAAGTTCTGTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTCTAAAGGCCAGCTCCTTGCTCTAGCCTTTTAAGTTCTGTCACA  350

seq1  GGGCATGGGAGGCTTTGAAAGATTTGTGGTTGCTCCCCCTTTATTATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGGGAGGCTTTGAAAGATTTGTGGTTGCTCCCCCTTTATTATTTT  400

seq1  ATATTTATTTTTTTGCCTTTTAGCATATCGTTGGGACCAGTTCCATTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTTTTTTGCCTTTTAGCATATCGTTGGGACCAGTTCCATTGTC  450

seq1  TTGTCTGTTACTTCTTGTTCTGGTTTTCCATCCTTTTCCTGACTGTACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTTACTTCTTGTTCTGGTTTTCCATCCTTTTCCTGACTGTACAC  500

seq1  TCAGCTTCTCTCCTACCCAGGGCCCCTGGGTGGCAGGCTGCCAGGGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCTCTCCTACCCAGGGCCCCTGGGTGGCAGGCTGCCAGGGCAGA  550

seq1  GTCTTCTATCAGATGTGCCCAAAGCATGCCAGGTGTGTCTGATTAAGCCC  600
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTATCAAATGTGCCCAAAGCATGCCAGGTGTGTCTGATTAAGCCC  600

seq1  TAGATGCCACAAGGCTAGAGGGATATTTGGGTATTGGAATACAATTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCCACAAGGCTAGAGGGATATTTGGGTATTGGAATACAATTTTCA  650

seq1  ACTGGAAGAGTGAACCATTTGATTGAACCCATGGCTAATTTTATAAGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAGAGTGAACCATTTGATTGAACCCATGGCTAATTTTATAAGAGT  700

seq1  CAGAACAGAAGAAACCAAAATAAAAGCACCAGGGGCTAACATTTGTCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGAAGAAACCAAAATAAAAGCACCAGGGGCTAACATTTGTCACT  750

seq1  GGCCTGTTACAGACCAGCTATTGTGCTAAATTCTTCACCTGGATCATCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTTACAGACCAGCTATTGTGCTAAATTCTTCACCTGGATCATCTC  800

seq1  CATTCTCAAAATCACTCTGAAGTAGGCAAAGACTCTTAGATTACACAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCAAAATCACTCTGAAGTAGGCAAAGACTCTTAGATTACACAAGT  850

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGGT  885
      |||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGGT  885