BAC Information

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BAC

Clone NameB6Ng01-098I16
Chromosome11 (Build37)
Map Location 10,465,784 - 10,625,917
singlet/doubletdoublet
Overlap genenone
Upstream geneAbca13, LOC665435, LOC382483
Downstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098I16.bB6Ng01-098I16.g
ACCDH908603DH908604
length1,04270
definitionDH908603|Mus musculus domesticus DNA, BAC clone: B6Ng01-098I16, 5' end.DH908604|Mus musculus domesticus DNA, BAC clone: B6Ng01-098I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,624,882 - 10,625,917)(10,465,784 - 10,465,853)
sequence
gaattcaaggtcagaactcactgtagtatctgcgaaggaaatgcttttac
agataacccaataatatcagccacattgagcatgatggattaattttatt
aaggcacacgaaggttatttgtttcatgctgaaatttttcagacttgaga
tatcttaataaatattctacacaccagaaatcatcttaactcagcatctt
aataattgcgtgttccaaactgtgaaagtcgggtttgtcatctagggaat
gtggctacttaatgcaagtatcagaagagacagctaataaatgcagatta
tgaaagcacgcagaggcatcctttgcttatggaaaatgctagaaggtaga
tgacaagtgcattaacctgaaagtggttttcagtaaaaaggaacaagtgc
ttactaatccagtgttctaaatgggttaaataaaaattactctttctaat
tgatagtttggaacagctcacaaaacacgtacacatcaactggtttctaa
aatatttttgatggtctagaaagttatttcacaattaacatggtcaggac
tccaaacttggcctttcaaatgcaaatgaattatctacagttctgtatct
cttgagatgttttcagtaaacttacaaaatatgtgttcacatcagctttt
gcctctgagccctcctactcccagattaatctttatcaggatgccaccca
ttctcttgctcaaacacatttataatgtgtttaagaaaagttgttatctc
aacagacaaaaccaactccccaaatatttcttctgttacagtctagaatt
gacttctctagagttgcgtctcctctccaggctgactggtcttctgatta
gtaatgtagcaaggtaagactctcatggtctagagatggcataagttgtt
aattttgccccttcccctgaaattcaaaattcaataccaagactaacttt
cttctctatgtagatgactggtcaaacagactgactgatattcattaaaa
catagttttttggtctttatatttaagtacttgggttagaca
attgtctttcacttttgacagttatgacttcctgtgtgacttagcctggt
ctcatatacatatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_10624882_10625917
seq2: B6Ng01-098I16.b_43_1084 (reverse)

seq1  TGTCTAACCCAGGTACTAAAATATAAAGA-CAAAAACCTATG-TTTAATG  48
      ||||||||||| ||||| ||||||||||| |||||| ||||| |||||||
seq2  TGTCTAACCCAAGTACTTAAATATAAAGACCAAAAAACTATGTTTTAATG  50

seq1  AATAATCAGTCAGTCTGTTTGACCAGTCATCTACATAGAGAAG-AAGTTA  97
      ||| ||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAT-ATCAGTCAGTCTGTTTGACCAGTCATCTACATAGAGAAGAAAGTTA  99

seq1  GTCTTGGTATTGAATTTTGAATTTCAGGGGAAGGGGCAAAATTAACAAC-  146
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTCTTGGTATTGAATTTTGAATTTCAGGGGAAGGGGCAAAATTAACAACT  149

seq1  TATGCCATCTCTAGACCATGAGAGTCTTACCTTGCTACATTACTTATCAG  196
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATGCCATCTCTAGACCATGAGAGTCTTACCTTGCTACATTACTAATCAG  199

seq1  AAGACCAGTCAGCCTGGAGAGGAGACGCAACTCTAGAGAAGTCAATTCTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGTCAGCCTGGAGAGGAGACGCAACTCTAGAGAAGTCAATTCTA  249

seq1  GACTGTAACAGAAGAAATATTTGGGGAGTTGGTTTTGTCTGTTGAGATAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTAACAGAAGAAATATTTGGGGAGTTGGTTTTGTCTGTTGAGATAA  299

seq1  CAACTTTTCTT-AACACATTATAAATGTGTTTGAGCAAGAGAATGGGTGG  345
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTTCTTAAACACATTATAAATGTGTTTGAGCAAGAGAATGGGTGG  349

seq1  CATCCTGATAAAGATTAATCTGGGAGTAGGAGGGCTCAGAGGCAAAAGCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGATAAAGATTAATCTGGGAGTAGGAGGGCTCAGAGGCAAAAGCT  399

seq1  GATGTGAACACATATTTTGTAAGTTTACTGAAAACATCTCAAGAGATACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAACACATATTTTGTAAGTTTACTGAAAACATCTCAAGAGATACA  449

seq1  GAACTGTAGATAATTCATTTGCATTTGAAAGGCCAAGTTTGGAGTCCTGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTAGATAATTCATTTGCATTTGAAAGGCCAAGTTTGGAGTCCTGA  499

seq1  CCATGTTAATTGTGAAATAACTTTCTAGACCATC-AAAATATTTTAGAAA  544
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCATGTTAATTGTGAAATAACTTTCTAGACCATCAAAAATATTTTAGAAA  549

seq1  CCAGTTGATGTGTACGTGTTTTGTGAGCTGTTCCAAACTATCAATTAGAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGATGTGTACGTGTTTTGTGAGCTGTTCCAAACTATCAATTAGAA  599

seq1  AGAGTAATTTTTATTTAACCCATTTAGAACACTGGATTAGTAAGCACTTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAATTTTTATTTAACCCATTTAGAACACTGGATTAGTAAGCACTTG  649

seq1  TTCCTTTTTACTGAAAACCACTTTCAGGTTAATGCACTTGTCATCTACCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTACTGAAAACCACTTTCAGGTTAATGCACTTGTCATCTACCT  699

seq1  TCTAGCATTTTCCATAAGCAAAGGATGCCTCTGCGTGCTTTCATAATCTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCATTTTCCATAAGCAAAGGATGCCTCTGCGTGCTTTCATAATCTG  749

seq1  CATTTATTAGCTGTCTCTTCTGATACTTGCATTAAGTAGCCACATTCCCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTAGCTGTCTCTTCTGATACTTGCATTAAGTAGCCACATTCCCT  799

seq1  AGATGACAAACCCGACTTTCACAGTTTGGAACACGCAATTATTAAGATGC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACAAACCCGACTTTCACAGTTTGGAACACGCAATTATTAAGATGC  849

seq1  TGAGTTAAGATGATTTCTGGTGTGTAGAATATTTATTAAGATATCTCAAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTAAGATGATTTCTGGTGTGTAGAATATTTATTAAGATATCTCAAG  899

seq1  TCTGAAAAATTTCAGCATGAAACAAATAACCTTCGTGTGCCTTAATAAAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAATTTCAGCATGAAACAAATAACCTTCGTGTGCCTTAATAAAA  949

seq1  TTAATCCATCATGCTC-CTGTGGCTGATATTATTGGGTTATCTGTAAAAG  993
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  TTAATCCATCATGCTCAATGTGGCTGATATTATTGGGTTATCTGTAAAAG  999

seq1  CATTTCCTTCGCAGATACTACAGTGAGTTCTGACCTTGAATTC  1036
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTTCGCAGATACTACAGTGAGTTCTGACCTTGAATTC  1042

seq1: chr11_10465784_10465853
seq2: B6Ng01-098I16.g_75_144

seq1  ATTGTCTTTCACTTTTGACAGTTATGACTTCCTGTGTGACTTAGCCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTTTCACTTTTGACAGTTATGACTTCCTGTGTGACTTAGCCTGGT  50

seq1  CTCATATACATATGTGTGTG  70
      ||||||||||||||||||||
seq2  CTCATATACATATGTGTGTG  70