BAC Information

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BAC

Clone NameB6Ng01-099A07
Chromosome11 (Build37)
Map Location 73,392,870 - 73,394,076
singlet/doubletsinglet
Overlap genenone
Upstream geneUbe2g1, Ankfy1, Cyb5d2, Zzef1, LOC627119, Atp2a3, P2rx1, LOC100043309, Camkk1, 1200014J11Rik, Itgae, Gsg2, P2rx5, Tmem93, Tax1bp3, Ctns, Carkl, Trpv1, Trpv3, Aspa, Spata22, Olfr20, Olfr376, Olfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1, Olfr380, Olfr381, Olfr382, Olfr383-ps1
Downstream geneOlfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099A07.bB6Ng01-099A07.g
ACCDH908931DH908932
length1,181449
definitionDH908931|Mus musculus domesticus DNA, BAC clone: B6Ng01-099A07, 5' end.DH908932|Mus musculus domesticus DNA, BAC clone: B6Ng01-099A07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacataagttgcatgtatattaactgctagggccattttcatgg
gagattctcacctgctattcaggtcgacacttgtgaaaataacaattaaa
gaagtgaagttcattaagtcaggagcagcaagcttgacacttggcctctg
ctttaaaatctctgcttctgggcctcaatcaattagatatgggcccactg
gttcacagaataataattctaagaaaataactgcataattttacctatat
tgttcttccctttgaagccaaacataagtaccaagtagtaaactcttaga
acagttgcactaatgacaataagcagaatggagacaccagcaattggaat
cagccagatagtgtcagtggaaggatttcaaaccttgctttgtttcttta
attttcttctctttggatcagctacagatggatcttagatccttggacat
attagatagccacttttccactgggctaaatgcccagccctgcccccaca
gtgatttgtgcttctctggagatgccaagcctccagcaggcactacttga
caacattccactatttggatgacctggcctgacctgtcactgcccttggt
agaattttgccacacaacttttgcttgtgtttctgacatgcttaatattt
gaattcctcagcaaaggcaaggcctggggtaaagtaacaattcatataaa
agctgatgtcgatacaaataaaactaatggtagttctctgagagattacc
tatgcaagaaatagagtcttccatacgacctattacttaagttgaattaa
taagaatcagatacaggatttgagatgaaaatattaaagaaaaaacttag
gaatattccaggagctgaaaaatcataactgagtcactaacattttttca
tataaattatttttattaaaaattttcatagaacactcttattagaatgt
gttaacttttttattttattttttaaatattttattacatattttcctca
tacatttccaatgctataccaaaagtcccaacaccctccttcccatttcc
ctaccacccattcccatttttggccctgcgtcccctgtgctgggcatata
agtttgcagtcaatggctttcttcagtgatgccactacgcatctttgatt
attatgcagcttgagtcagattcgggtactg
ttctggcaccagattgagcagatgcagagacccacggccaagctttatgc
ataaagacagtataaattgaagtattccactgtgtccctctcctcagaga
tggggaaaccatatggaagagggggaggaaagattgtaggagtcaaagga
gctggaggataccaggagatcatggtcccaccaaattaactaaacaattg
ctcacagggttcccaaagcctgacaaggcaagcaggggtgtggggcgcag
gggtgtggggcaatgggctatgcacagacagtctggtctccatccagtct
taggtctccagcttaggtcttgaaccccggtggaacccggtgggtggtaa
tttccacctacatgggatggaaggccttaaatcatgtctcctggatccct
ggctcctgtcgaaattactgccccacagccgccaggggagctctgtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_73392870_73394076
seq2: B6Ng01-099A07.b_46_1226 (reverse)

seq1  CAGTACCCCGGAGCTCTTGACTCTAGCTGCATATATATCAAAAGATGGCG  50
      ||||| |||| | |   |||||| ||||||||| |||   |||||| |||
seq2  CAGTA-CCCGAATC---TGACTCAAGCTGCATA-ATAATCAAAGAT-GCG  44

seq1  TAGTTGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATA  100
      ||||  | ||||||||  |||| ||  ||||| ||| ||||||| |||||
seq2  TAGT--GGCATCACTG--AAGAAAG--CCATT-GAC-TGCAAAC-TTATA  85

seq1  TGCCCCAGCACAGGGGAACGCCAGGGCCAAAAAATGGGAATGGGTGGGTA  150
      || ||||||||||||| ||| ||||||| |||||||||||||||| ||||
seq2  TG-CCCAGCACAGGGG-ACG-CAGGGCC-AAAAATGGGAATGGGT-GGTA  130

seq1  GGGAAATGGGAAGGAGGGTGTTGGGGACTTTTGGTATAGCATTGGAAATG  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGGAAATGGGAAGGAGGGTGTT-GGGACTTTTGGTATAGCATTGGAAATG  179

seq1  TAATTGAGGAAAATATGTAATAAAAAATATTTAAAAAATAAAATAAAAAA  250
      ||  |||||||||||||||||  |||||||||||||||||||||||||||
seq2  TA--TGAGGAAAATATGTAAT--AAAATATTTAAAAAATAAAATAAAAAA  225

seq1  GTTAACACATTCTTAATAAGAGTGTTCTATGAAAATTTTTAATAAAAATA  300
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTTAACACATTC-TAATAAGAGTGTTCTATGAAAATTTTTAATAAAAATA  274

seq1  ATTTATATGAAAAAATGTTAGTGACTCAGTTATGATTTTTCAGCTCCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATGAAAAAATGTTAGTGACTCAGTTATGATTTTTCAGCTCCTGG  324

seq1  AATATTCCTAAGTTTTTTCTTTAATATTTTCATCTCAAATCCTGTATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCCTAAGTTTTTTCTTTAATATTTTCATCTCAAATCCTGTATCTG  374

seq1  ATTCTTATTAATTCAACTTAAGTAATAGGTCGTATGGAAGACTCTATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATTAATTCAACTTAAGTAATAGGTCGTATGGAAGACTCTATTTC  424

seq1  TTGCATAGGTAATCTCTCAGAGAACTACCATTAGTTTTATTTGTATCGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAGGTAATCTCTCAGAGAACTACCATTAGTTTTATTTGTATCGAC  474

seq1  ATCAGCTTTTATATGAATTGTTACTTTACCCCAGGCCTTGCCTTTGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTTTTATATGAATTGTTACTTTACCCCAGGCCTTGCCTTTGCTGA  524

seq1  GGAATTCAAATATTAAGCATGTCAGAAACACAAGCAAAAGTTGTGTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCAAATATTAAGCATGTCAGAAACACAAGCAAAAGTTGTGTGGCA  574

seq1  AAATTCTACCAAGGGCAGTGACAGGTCAGGCCAGGTCATCCAAATAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTACCAAGGGCAGTGACAGGTCAGGCCAGGTCATCCAAATAGTGG  624

seq1  AATGTTGTCAAGTAGTGCCTGCTGGAGGCTTGGCATCTCCAGAGAAGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGTCAAGTAGTGCCTGCTGGAGGCTTGGCATCTCCAGAGAAGCAC  674

seq1  AAATCACTGTGGGGGCAGGGCTGGGCATTTAGCCCAGTGGAAAAGTGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACTGTGGGGGCAGGGCTGGGCATTTAGCCCAGTGGAAAAGTGGCT  724

seq1  ATCTAATATGTCCAAGGATCTAAGATCCATCTGTAGCTGATCCAAAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATATGTCCAAGGATCTAAGATCCATCTGTAGCTGATCCAAAGAGA  774

seq1  AGAAAATTAAAGAAACAAAGCAAGGTTTGAAATCCTTCCACTGACACTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTAAAGAAACAAAGCAAGGTTTGAAATCCTTCCACTGACACTAT  824

seq1  CTGGCTGATTCCAATTGCTGGTGTCTCCATTCTGCTTATTGTCATTAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGATTCCAATTGCTGGTGTCTCCATTCTGCTTATTGTCATTAGTG  874

seq1  CAACTGTTCTAAGAGTTTACTACTTGGTACTTATGTTTGGCTTCAAAGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTTCTAAGAGTTTACTACTTGGTACTTATGTTTGGCTTCAAAGGG  924

seq1  AAGAACAATATAGGTAAAATTATGCAGTTATTTTCTTAGAATTATTATTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAATATAGGTAAAATTATGCAGTTATTTTCTTAGAATTATTATTC  974

seq1  TGTGAACCAGTGGGCCCATATCTAATTGATTGAGGCCCAGAAGCAGAGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACCAGTGGGCCCATATCTAATTGATTGAGGCCCAGAAGCAGAGAT  1024

seq1  TTTAAAGCAGAGGCCAAGTGTCAAGCTTGCTGCTCCTGACTTAATGAACT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCAGAGGCCAAGTGTCAAGCTTGCTGCTCCTGACTTAATGAACT  1074

seq1  TCACTTCTTTAATTGTTATTTTCACAAGTGTCGACCTGAATAGCAGGTGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTTTAATTGTTATTTTCACAAGTGTCGACCTGAATAGCAGGTGA  1124

seq1  GAATCTCCCATGAAAATGGCCCTAGCAGTTAATATACATGCAACTTATGT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCCCATGAAAATGGCCCTAGCAGTTAATATACATGCAACTTATGT  1174

seq1  GGAATTC  1207
      |||||||
seq2  GGAATTC  1181