BAC Information

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BAC

Clone NameB6Ng01-100M24
Chromosome11 (Build37)
Map Location 56,654,155 - 56,815,860
singlet/doubletdoublet
Overlap genenone
Upstream geneNmur2, LOC100040816, LOC624168
Downstream geneGria1, LOC667878, 1810073G14Rik, Mfap3, Galnt10, Sap30l, Hand1, LOC624605, Larp1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100M24.bB6Ng01-100M24.g
ACCDH910195DH910196
length7351,079
definitionDH910195|Mus musculus domesticus DNA, BAC clone: B6Ng01-100M24, 5' end.DH910196|Mus musculus domesticus DNA, BAC clone: B6Ng01-100M24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,815,127 - 56,815,860)(56,654,155 - 56,655,227)
sequence
gaattccagaacattcttcaagcgttcgcactgcctgattgtgctgaccc
agcacctagctgtctcctcactgagatgtgtctcccagaggcagagacca
aacagacaaccctgcatccttctaacttctacagtgtagcttttctacag
agaacagtttagagcctgccccttttgaaggtaattgttttgtttgtttg
tttgtttgttttagttttgtgtgtgcatgtgctcacatgtgtgtttgtgc
gtgtgtttgtgtgtgtgtgtgcttgtgtacgtgtgtgcaggccaggggtt
aatgtgtaaaggcaggcaggcaactgtggataccagaagatggatttaga
tctgaaactgcttttttttttttttttttttttttttttttttttttttt
tttcagaatagacaaaactcacccctggtctaaataagctgccaataaac
tgtagctaaccacaaatatattttgaagggcaggggtttacaaaaaatgg
ggccaaggactacatacaccgcttttcatttaatgcttactgcgatcttt
gaggcatttccatccccttttcatggagcaggaaagggaggtttagggag
ccaatgtttttttactggaggccccgcactcaaagagcactgggactcat
ctgcaaagcccgcctttttgactccagaatccagctctaaatgtgagtgg
aaagaaacacggggcagtgttgaagtttcatttgg
gaattccacacccacagggggaagaagctacaggctctgctacctcatga
acttccagcctctgaaggaacacagatatctctgaagtattctgttatgg
cctgtttatagttttgacagtgatcatgtggattttaatataatgatctg
ctggtggctgaactttgaaatgtggccacttccctgtatatagacaagag
atattcagtggaaaggaattcttttttctctttttctccattagtagaat
tgtgaaatccatctccctttccctcttcccttccacccctcctgccccag
ccccctccccccacatacacatttacacggtggtatgtggggaaatgttc
tttagcaaaggacagcaactctctcatcttgtctgtctcttctgtctgaa
ccacactaagagggcagcttcagatggacagagcttcaacagggtctttc
aaccttgacttattagatgagtaattggcctaagacagattctgatccca
gaagtgtagtgggttcctctggaggggaagccagcaggcttgggacaggg
agagcatgtgatgctacaagcaggtagccagcccattagagaagcgtgag
cttgtgttttaaacatgacaaccatcatgccatctgtattttctgtaatt
attacctttctgttctctgagtattaaggttgcttttgaaaatgtcagcc
tgtctcagctgaacaaagaaaaccaagagagcttgcttctattcatgcat
tcgaagattttcacaaggaggtgagagtgttagctttaaaggttcctgag
tagtgggaaccaacagagcctgatggaaaggagatctctgggagaaagat
cccggcccctttaagtggccactgctctctggtgtgacagctttctgcat
ttactctcccaggctgcaaaagcctttgcattttcaaaatgtttcaaaat
caaattttctattatacaaaaagttctacacatcacagggaaagtaagga
aactctcataaatgcagaggtagaggggtcaaaccagccttggatgcctg
gactcatccggaggttcctttctctatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_56815127_56815860
seq2: B6Ng01-100M24.b_44_778 (reverse)

seq1  CCAAATGAAACCTCAACACTG-CCCGTGCTTCTTTCCACTCACATTTAGA  49
      ||||||||||| ||||||||| |||||| |||||||||||||||||||||
seq2  CCAAATGAAACTTCAACACTGCCCCGTGTTTCTTTCCACTCACATTTAGA  50

seq1  GCTGGGTTCTGGAGTCAGAAAGGCTGGCTTTGCAGATGAGTCCCAGTGCT  99
      ||||| ||||||||||| |||||| |||||||||||||||||||||||||
seq2  GCTGGATTCTGGAGTCAAAAAGGCGGGCTTTGCAGATGAGTCCCAGTGCT  100

seq1  CTTTGAGCTGCGTGGCCTCCAGT-GAGAAACATTGGCTCCCTGAACCTCC  148
      ||||||| |||| ||||||||||  | ||||||||||||||| |||||||
seq2  CTTTGAG-TGCGGGGCCTCCAGTAAAAAAACATTGGCTCCCTAAACCTCC  149

seq1  CTTTCCTGCTCCATGAAATGGGGATGGAAATGCCTCAGAGATCGCAGTAA  198
      |||||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  CTTTCCTGCTCCATGAAAAGGGGATGGAAATGCCTCAAAGATCGCAGTAA  199

seq1  GCATTAAATGAAAAGCTGTGTATGTAGTCCTTGGCACCATGTCTTGTAAA  248
      |||||||||||||||| |||||||||||||||||| |||| | |||||||
seq2  GCATTAAATGAAAAGCGGTGTATGTAGTCCTTGGCCCCATTTTTTGTAAA  249

seq1  CCACTGACCTTCAATATATATTTGTGGTTAGCTACAGTTTATTGGCAGCT  298
      || ||| ||||||| |||||||||||||||||||||||||||||||||||
seq2  CCCCTGCCCTTCAAAATATATTTGTGGTTAGCTACAGTTTATTGGCAGCT  299

seq1  TATTTAGACCAGGGCTGAGCTCTGACTACTCAGAAAAAAAAAAAAAAAAA  348
      |||||||||||||| |||| | || ||| || ||||||||||||||||||
seq2  TATTTAGACCAGGGGTGAGTTTTGTCTATTCTGAAAAAAAAAAAAAAAAA  349

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAGCAGTTTCAGATCTAAATCCATCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAAGCAGTTTCAGATCTAAATCCATCTT  399

seq1  CTGGTATCCACAGTTGCCTGCCTGCCTTTACACATTAACCCCTGGCCTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATCCACAGTTGCCTGCCTGCCTTTACACATTAACCCCTGGCCTGC  449

seq1  ACACACGTACACAAGCACACACACACACAAACACACGCACAAACACACAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGTACACAAGCACACACACACACAAACACACGCACAAACACACAT  499

seq1  GTGAGCACATGCACACACAAAACTAAAACAAACAAACAAACAAACAAAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCACATGCACACACAAAACTAAAACAAACAAACAAACAAACAAAAC  549

seq1  AATTACCTTCAAAAGGGGCAGGCTCTAAACTGTTCTCTGTAGAAAAGCTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCTTCAAAAGGGGCAGGCTCTAAACTGTTCTCTGTAGAAAAGCTA  599

seq1  CACTGTAGAAGTTAGAAGGATGCAGGGTTGTCTGTTTGGTCTCTGCCTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAGAAGTTAGAAGGATGCAGGGTTGTCTGTTTGGTCTCTGCCTCT  649

seq1  GGGAGACACATCTCAGTGAGGAGACAGCTAGGTGCTGGGTCAGCACAATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACACATCTCAGTGAGGAGACAGCTAGGTGCTGGGTCAGCACAATC  699

seq1  AGGCAGTGCGAACGCTTGAAGAATGTTCTGGAATTC  734
      ||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTGCGAACGCTTGAAGAATGTTCTGGAATTC  735

seq1: chr11_56654155_56655227
seq2: B6Ng01-100M24.g_69_1147

seq1  GAATTCCACACCCACAGGGGGAAGAAGCTACAGGCTCTGCTACCTCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCCACAGGGGGAAGAAGCTACAGGCTCTGCTACCTCATGA  50

seq1  ACTTCCAGCCTCTGAAGGAACACAGATATCTCTGAAGTATTCTGTTATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAGCCTCTGAAGGAACACAGATATCTCTGAAGTATTCTGTTATGG  100

seq1  CCTGTTTATAGTTTTGACAGTGATCATGTGGATTTTAATATAATGATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTATAGTTTTGACAGTGATCATGTGGATTTTAATATAATGATCTG  150

seq1  CTGGTGGCTGAACTTTGAAATGTGGCCACTTCCCTGTATATAGACAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGCTGAACTTTGAAATGTGGCCACTTCCCTGTATATAGACAAGAG  200

seq1  ATATTCAGTGGAAAGGAATTCTTTTTTCTCTTTTTCTCCATTAGTAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAGTGGAAAGGAATTCTTTTTTCTCTTTTTCTCCATTAGTAGAAT  250

seq1  TGTGAAATCCATCTCCCTTTCCCTCTTCCCTTCCACCCCTCCTGCCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATCCATCTCCCTTTCCCTCTTCCCTTCCACCCCTCCTGCCCCAG  300

seq1  CCCCCTCCCCCCACATACACATTTACACGGTGGTATGTGGGGAAATGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCCCCACATACACATTTACACGGTGGTATGTGGGGAAATGTTC  350

seq1  TTTAGCAAAGGACAGCAACTCTCTCATCTTGTCTGTCTCTTCTGTCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAAAGGACAGCAACTCTCTCATCTTGTCTGTCTCTTCTGTCTGAA  400

seq1  CCACACTAAGAGGGCAGCTTCAGATGGACAGAGCTTCAACAGGGTCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTAAGAGGGCAGCTTCAGATGGACAGAGCTTCAACAGGGTCTTTC  450

seq1  AACCTTGACTTATTAGATGAGTAATTGGCCTAAGACAGATTCTGATCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGACTTATTAGATGAGTAATTGGCCTAAGACAGATTCTGATCCCA  500

seq1  GAAGTGTAGTGGGTTCCTCTGGAGGGGAAGCCAGCAGGCTTGGGACAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTAGTGGGTTCCTCTGGAGGGGAAGCCAGCAGGCTTGGGACAGGG  550

seq1  AGAGCATGTGATGCTACAAGCAGGTAGCCAGCCCATTAGAGAAGCGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATGTGATGCTACAAGCAGGTAGCCAGCCCATTAGAGAAGCGTGAG  600

seq1  CTTGTGTTTTAAACATGACAACCATCATGCCATCTGTATTTTCTGTAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTTTAAACATGACAACCATCATGCCATCTGTATTTTCTGTAATT  650

seq1  ATTACCTTTCTGTTCTCTGAGTATTAAGGTTGC-TTTGAAAATGTCAGCC  699
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTACCTTTCTGTTCTCTGAGTATTAAGGTTGCTTTTGAAAATGTCAGCC  700

seq1  TGTCTCAGCTGAACAAAGAAAACCAAGAGAGCTTGCTTCTATTCATGCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGCTGAACAAAGAAAACCAAGAGAGCTTGCTTCTATTCATGCAT  750

seq1  TCGAAGA-TTTCACAAGGAGGTGAGAGTGTTAGCTTTAAAGGTTCCTGAG  798
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGATTTTCACAAGGAGGTGAGAGTGTTAGCTTTAAAGGTTCCTGAG  800

seq1  TAGTGGGAACCAACAGAGCCTGATGGGAAAGGAGATCTCTGGGAGAAAGA  848
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAGTGGGAACCAACAGAGCCTGAT-GGAAAGGAGATCTCTGGGAGAAAGA  849

seq1  ATCCCGCCCCTTTAAGTGGCCACTGCTCTCT-GTGTGACAGCTTTCTGCA  897
        || |||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCCCGGCCCCTTTAAGTGGCCACTGCTCTCTGGTGTGACAGCTTTCTGCA  899

seq1  TTTTACTCTCCCAGGCTGCAAAAGCCTTTGCATTTTCAAAATGTTTTCAA  947
       |||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  -TTTACTCTCCCAGGCTGCAAAAGCCTTTGCATTTTCAAAATG-TTTCAA  947

seq1  AATCAAATTTTCTATTATACAAAAAGTTCTACACATCACA-GGAAAGT-A  995
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  AATCAAATTTTCTATTATACAAAAAGTTCTACACATCACAGGGAAAGTAA  997

seq1  GGAAACTCACATAAATGCA-AAGTAGAGGGTCAAAACCAGCCTT-GATGC  1043
      |||||||| |||||||||| | ||||||||   ||||||||||| |||||
seq2  GGAAACTCTCATAAATGCAGAGGTAGAGGGGTCAAACCAGCCTTGGATGC  1047

seq1  --TGACACATCCTGAGGTTTCCTTCTCTATCA  1073
         ||| ||||| |||||| | ||||||||||
seq2  CTGGACTCATCCGGAGGTTCCTTTCTCTATCA  1079