BAC Information

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BAC

Clone NameB6Ng01-101B23
Chromosome11 (Build37)
Map Location 36,651,180 - 36,742,559
singlet/doubletdoublet
Overlap geneOdz2
Upstream geneWwc1, LOC636532
Downstream geneLOC100039148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101B23.bB6Ng01-101B23.g
ACCDH910410DH910411
length1,0101,094
definitionDH910410|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B23, 5' end.DH910411|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,741,544 - 36,742,559)(36,651,180 - 36,652,311)
sequence
gaattcaaaaacattacattccttcctaccagtagagtagcttgcaattt
gaaccagaaagaactactccaagcagaaccaattaaccatttgagtttaa
gaaattctttctggaccaaagtcttcctcttctactgaatattacctata
aaagtgtttaaaaatgctcacttttattttatgtgtatgagtgttttgcc
tgtatgcatatatattcaccacatgtgtgtctggtgcctgcagaagccag
aagagtgtttaggatatcctggagctagagttagatgtggttgtcaactg
cccagtatgcatgattgggaaccaaatctgggtcctttataagaagaata
agtactctgaaccactgagcccactctctttaatgacaaacatccttaca
aagagtgactatcacttcaaatgtctaccatgaacaaaatacctaaataa
ttttatataccctataaatgtatttgaaagttgctatccctaaaacatac
tagtgtatagtcattcaaccctgagggggagtttaggctaggagactgac
cccatccatcccaaaatattacacatttaagatgtcaaaaatcaaacaaa
caaaacatgctgttttcttctgtcagcactgcctgccagactgttgtgca
aacactaggcagcatgatacatctctttccatttctaaattctgcttagt
gtatggcaggaaacccatatagcttatagccagagctcatacagaccttc
ctgtaaatgtagtcctaggctgtgtctgatatatagcttctatgagatga
agtctagggtttgtagggatagcttttcagtcacaaaaacattgctttca
cccagaacctgagcttggttcccagcatccaagtggcagctcacaactgc
ctgaaactcctgttccaggggatccaatgccatctgccatcttctggtat
ctgtggttatctacatgtatatgctaacaaaccagaacatagcaaacaaa
ggaaaactca
gaattcaactgtaatactttatgagacagcgcattctataaagtgattgc
acgtatatttggtttttttttttcaagatgcacagaagtgttcactggat
ttggagggaaaatatacagaacacatagtggtctaaaatgctatttcttg
gctggtacctggtccaaaagtaagtactttagcacatctctaacacactc
aataagcttgctattattaactaaagactgcatttcaagtacattatggc
atcactcgaagtaatagcaactgaaatgtacctacttaatggaatcgatc
tttcataaagaccgcagtaaagtattatcagaagtcacttattgaacttt
atttctcaatgatataataaaaagaagcatgtcaggaataaaaatgccgt
ttgtcatctgcatctctggcacctcagaaatggtatccaagagcaggggt
gggccctcctcacacattacaatgagagtaaggactagccatttccttaa
gcctcgggacaaaagagtcttcaatgcctagagtaaaacactagtgtgat
ccactgatgcacatagttctacgttcctgggaaagaccaatgtcacagcg
tttctttccctaataagacaccccagggttccagttctaagctttcccat
acttctaggagtccaagtcatttgagagattctccttgattatttttttc
tgccctatttctctggtttgtagccagtaatttttggttttcatggtcta
tttgctaactgtgatgtttttcgaagacaatacaacatctgcaatagacc
ccaagtgaactagggggaacagtatagatgaggcactttcacaagaaaaa
gaatcagtctggggaatgcgatacctcagatatggtagttgagtattccg
tggccagaatgtagacactgaaaactctttcactatcgtccctatagtaa
tggaaatgggttttctttaagcaagcaaacaaacaacaaacaccacacca
cacacacacaaactttgagagttgtgacttgctgccactaagatctattc
attcagtaataaggctataataggaaatcttagagtagctttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_36741544_36742559
seq2: B6Ng01-101B23.b_44_1053 (reverse)

seq1  TGAGTTTTTCTTTTGTTTTGCTATTGTTTCTGGTTTTGTTAGCATATACA  50
      |||||||| ||||   ||||||||   |||||| ||||||||||||||||
seq2  TGAGTTTTCCTTT--GTTTGCTAT--GTTCTGG-TTTGTTAGCATATACA  45

seq1  TGTAGATAAACCACAGATACCAGAAGATGGCAGATGGCATTGGATCCCCT  100
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAT-AACCACAGATACCAGAAGATGGCAGATGGCATTGGATCCCCT  94

seq1  GGAACAGGAGTTTCAGGCAGTTGTGAGCTGCCACTTGGATGCTGGGAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGGAGTTTCAGGCAGTTGTGAGCTGCCACTTGGATGCTGGGAACC  144

seq1  AAGCTCAGGTTCTGGGTGAAAGCAATGTTTTTGTGACTGAAAAGCTATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAGGTTCTGGGTGAAAGCAATGTTTTTGTGACTGAAAAGCTATCC  194

seq1  CTACAAACCCTAGACTTCATCTCATAGAAGCTATATATCAGACACAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAACCCTAGACTTCATCTCATAGAAGCTATATATCAGACACAGCCT  244

seq1  AGGACTACATTTACAGGAAGGTCTGTATGAGCTCTGGCTATAAGCTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTACATTTACAGGAAGGTCTGTATGAGCTCTGGCTATAAGCTATAT  294

seq1  GGGTTTCCTGCCATACACTAAGCAGAATTTAGAAATGGAAAGAGATGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCCTGCCATACACTAAGCAGAATTTAGAAATGGAAAGAGATGTAT  344

seq1  CATGCTGCCTAGTGTTTGCACAACAGTCTGGCAGGCAGTGCTGACAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGCCTAGTGTTTGCACAACAGTCTGGCAGGCAGTGCTGACAGAAG  394

seq1  AAAACAGCATGTTTTGTTTGTTTGATTTTTGACATCTTAAATGTGTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCATGTTTTGTTTGTTTGATTTTTGACATCTTAAATGTGTAATA  444

seq1  TTTTGGGATGGATGGGGTCAGTCTCCTAGCCTAAACTCCCCCTCAGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGATGGATGGGGTCAGTCTCCTAGCCTAAACTCCCCCTCAGGGTT  494

seq1  GAATGACTATACACTAGTATGTTTTAGGGATAGCAACTTTCAAATACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACTATACACTAGTATGTTTTAGGGATAGCAACTTTCAAATACATT  544

seq1  TATAGGGTATATAAAATTATTTAGGTATTTTGTTCATGGTAGACATTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGTATATAAAATTATTTAGGTATTTTGTTCATGGTAGACATTTGA  594

seq1  AGTGATAGTCACTCTTTGTAAGGATGTTTGTCATTAAAGAGAGTGGGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAGTCACTCTTTGTAAGGATGTTTGTCATTAAAGAGAGTGGGCTC  644

seq1  AGTGGTTCAGAGTACTTATTCTTCTTATAAAGGACCCAGATTTGGTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTCAGAGTACTTATTCTTCTTATAAAGGACCCAGATTTGGTTCCC  694

seq1  AATCATGCATACTGGGCAGTTGACAACCACATCTAACTCTAGCTCCAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGCATACTGGGCAGTTGACAACCACATCTAACTCTAGCTCCAGGA  744

seq1  TATCCTAAACACTCTTCTGGCTTCTGCAGGCACCAGACACACATGTGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAAACACTCTTCTGGCTTCTGCAGGCACCAGACACACATGTGGTG  794

seq1  AATATATATGCATACAGGCAAAACACTCATACACATAAAATAAAAGTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATGCATACAGGCAAAACACTCATACACATAAAATAAAAGTGAG  844

seq1  CATTTTTAAACACTTTTATAGGTAATATTCAGTAGAAGAGGAAGACTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAAACACTTTTATAGGTAATATTCAGTAGAAGAGGAAGACTTTG  894

seq1  GTCCAGAAAGAATTTCTTAAACTCAAATGGTTAATTGGTTCTGCTTGGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAAAGAATTTCTTAAACTCAAATGGTTAATTGGTTCTGCTTGGAG  944

seq1  TAGTTCTTTCTGGTTCAAATTGCAAGCTACTCTACTGGTAGGAAGGAATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTTCTGGTTCAAATTGCAAGCTACTCTACTGGTAGGAAGGAATG  994

seq1  TAATGTTTTTGAATTC  1016
      ||||||||||||||||
seq2  TAATGTTTTTGAATTC  1010

seq1: chr11_36651180_36652311
seq2: B6Ng01-101B23.g_70_1163

seq1  GAATTCAACTGTAATACTTTATGAGACAGCGCATTCTATAAAGTGATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGTAATACTTTATGAGACAGCGCATTCTATAAAGTGATTGC  50

seq1  ACGTATATTTGGTTTTTTTTTTTCAAGATGCACAGAAGTGTTCACTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATATTTGGTTTTTTTTTTTCAAGATGCACAGAAGTGTTCACTGGAT  100

seq1  TTGGAGGGAAAATATACAGAACACATAGTGGTCTAAAATGCTATTTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGGAAAATATACAGAACACATAGTGGTCTAAAATGCTATTTCTTG  150

seq1  GCTGGTACCTGGTCCAAAAGTAAGTACTTTAGCACATCTCTAACACACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTACCTGGTCCAAAAGTAAGTACTTTAGCACATCTCTAACACACTC  200

seq1  AATAAGCTTGCTATTATTAACTAAAGACTGCATTTCAAGTACATTATGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCTTGCTATTATTAACTAAAGACTGCATTTCAAGTACATTATGGC  250

seq1  ATCACTCGAAGTAATAGCAACTGAAATGTACCTACTTAATGGAATCGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCGAAGTAATAGCAACTGAAATGTACCTACTTAATGGAATCGATC  300

seq1  TTTCATAAAGACCGCAGTAAAGTATTATCAGAAGTCACTTATTGAACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAAAGACCGCAGTAAAGTATTATCAGAAGTCACTTATTGAACTTT  350

seq1  ATTTCTCAATGATATAATAAAAAGAAGCATGTCAGGAATAAAAATGCCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAATGATATAATAAAAAGAAGCATGTCAGGAATAAAAATGCCGT  400

seq1  TTGTCATCTGCATCTCTGGCACCTCAGAAATGGTATCCAAGAGCAGGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATCTGCATCTCTGGCACCTCAGAAATGGTATCCAAGAGCAGGGGT  450

seq1  GGGCCCTCCTCACACATTACAATGAGAGTAAGGACTAGCCATTTCCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTCCTCACACATTACAATGAGAGTAAGGACTAGCCATTTCCTTAA  500

seq1  GCCTCGGGACAAAAGAGTCTTCAATGCCTAGAGTAAAACACTAGTGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGGGACAAAAGAGTCTTCAATGCCTAGAGTAAAACACTAGTGTGAT  550

seq1  CCACTGATGCACATAGTTCTACGTTCCTGGGAAAGACCAATGTCACAGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGATGCACATAGTTCTACGTTCCTGGGAAAGACCAATGTCACAGCG  600

seq1  TTTCTTTCCCTAATAAGACACCCCAGGGTTCCAGTTCTAAGCTTTCCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCCTAATAAGACACCCCAGGGTTCCAGTTCTAAGCTTTCCCAT  650

seq1  ACTTCTAGGAGTCCAAGTCATTTGAGAGATTCTCCTTGATTATTTTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAGGAGTCCAAGTCATTTGAGAGATTCTCCTTGATTATTTTTTTC  700

seq1  TGCCCTATTTCTCTGGTTTGTAGCCAGTAATTTTTGGTTTTCATGGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTATTTCTCTGGTTTGTAGCCAGTAATTTTTGGTTTTCATGGTCTA  750

seq1  TTTGCTAACTGTGATG-TTTTCGAAGACAATACAACATCTGCAATAGACC  799
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTGCTAACTGTGATGTTTTTCGAAGACAATACAACATCTGCAATAGACC  800

seq1  CCAAGTGAACTAGGGGGAACAGTATAGATGAGGCAC-TTCACAAGAAAAA  848
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCAAGTGAACTAGGGGGAACAGTATAGATGAGGCACTTTCACAAGAAAAA  850

seq1  GAATCAGTCTGGGGAATGCGATACCTCAGATATGGTAGTTGAGTATTTCC  898
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAATCAGTCTGGGGAATGCGATACCTCAGATATGGTAGTTGAGTA-TTCC  899

seq1  GTGGCCAGAATGTAGACACTGAAAACTCTTTTCACCTATCGTCCCTAATA  948
      |||||||||||||||||||||||||||| ||||| ||||||||||| |||
seq2  GTGGCCAGAATGTAGACACTGAAAACTC-TTTCA-CTATCGTCCCT-ATA  946

seq1  GTAAATGGAAATGGGTTTTCTTTAAAAGCAAAGCAAAACAAAACAAAACA  998
      || ||||||||||||||||||||  |||| ||||           |||||
seq2  GT-AATGGAAATGGGTTTTCTTT--AAGC-AAGC-----------AAACA  981

seq1  AACAACAACAACAACAACAACAACAACAAAAACCTTTGGAGAAGTCTGTG  1048
      ||||||||  || || || |||   ||| ||||  || ||| ||| ||||
seq2  AACAACAAACACCAC-ACCACACACACACAAAC--TTTGAG-AGT-TGTG  1026

seq1  AACTTTGCTTGCCCACTAAAGATTCTATTTCATTCAAGTTAATTAAGTCA  1098
      |   |||||   ||||| |||| |||| ||||||| |||  | |||| | 
seq2  A--CTTGCT--GCCACT-AAGA-TCTA-TTCATTC-AGT--AATAAGGC-  1065

seq1  TATATTAGGAGACATCCTTAGGAAGTAGCTTTGT  1132
      |||| |||||   |  |||||  |||||||||||
seq2  TATAATAGGA---AATCTTAG--AGTAGCTTTGT  1094