BAC Information

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BAC

Clone NameB6Ng01-101G16
Chromosome11 (Build37)
Map Location 74,420,292 - 74,551,944
singlet/doubletdoublet
Overlap geneE130309D14Rik, 1300001I01Rik, Pafah1b1
Upstream geneOlfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4
Downstream geneMett10d, Mnt, Rutbc1, Tsr1, Srr, LOC100042478, Smg6, LOC100043429, LOC627835, Hic1, LOC668604, Ovca2, Dph1, Rtn4rl1, Rpa1, Smyd4, Serpinf1, LOC100043447, Serpinf2, Wdr81, LOC100042498, 2010305C02Rik, Prpf8, Rilp, Scarf1, Slc43a2, Pitpna, LOC654359, Pps, Myo1c, Crk, Ywhae
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101G16.bB6Ng01-101G16.g
ACCDH910607DH910608
length1,187961
definitionDH910607|Mus musculus domesticus DNA, BAC clone: B6Ng01-101G16, 5' end.DH910608|Mus musculus domesticus DNA, BAC clone: B6Ng01-101G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,550,756 - 74,551,944)(74,420,292 - 74,421,258)
sequence
gaattctaggtcagtactctgctactgatctctatacctaaccttatgac
tgacatttcaaaaatgtatttattattattacgtatggcatgtacatgtg
tgactttgcatacacatgtacatccatgcagtatgcatgaggtagtccta
acttgtttcctactgtggtaataagcaccactgccaaaaactagctgcga
aggagagggttttttcatccatgtcacagcccatcaggggtaagagctca
agtagggcaggaacctgggagcaagaactggagtggaagctgtaggtgag
tgctgcttgctctatgtggctcgctcagtctgctctacagcccaggacga
cctgcccagggatggcactgatctaaatggcctctgccctcccacatcaa
tcattaatcaagaaaatgcccatagacttgcctaaagactgtctgatgga
ggcattttctcaatgaaagctccctcttcctggatgatgctagtctgtgt
caagtcaacaaaacaaaacacaaaacaaaacaaaacaaaacaaaaaccct
aagaaaccaaaacaaaacctagcacacaaggcttggatagcctgtgcttt
atctactgcaaaggccagaagagagcatcagatcacaaaattatggaatg
aggtgggtgcctaggagatcagtaagcattaggaactgctaagccatctc
cctagtcccatcaaacacatctgtgatctaagcactgaggaggtagatgc
agaaagatcaggaatttggaatcatccttagccacagagtaagtttaaat
tcagtctagattgtttgagactctgtctcaaaaatccaagtgagagccat
ttatttgggactgggtgtggtctcttatactagaactctctcagtgtaca
cagaccctggtctcaacctccagcacacatccatgtacacaaaaagaatc
tctctccgtgatgcagccagcatgtgcttctccttgttggaatcgtattt
cattatgtggctggatcacaggtattttttcatttattcaactgacaggt
agttggttattttataggtacttagcaattgtgagttaagttagcatcat
ggatgcactcaattgttttttgcaaaaggtgggaaaggaaactggagctt
aagggggattaacaaaactatgggatccgagaaagcc
gaattcaaggccagccaggtctacatagtgagtttcaggacatcttgggc
tacatagtgagatccttttccaaaattttttttattaatgatggtaaaag
ctgaagaaagccgggtggtggtggtgcacgcctttaatcccagcacttgg
ggggcagaggcaggtggatttctgagttcgaggccagcctggtctacaga
gtgagttccaggacagccagggctacacagagaaaccctgtctcaaaaaa
ccaaaaaaaaaaaaaaaaaaaaaaaaaagctgaagaaaattaataagttg
ggtatcatcaaaatctaaattggggctagagagaggttctaaattcaatt
cccagcaaccacaaggcaattcagagaatatgagttctgatgccctcttc
tggcatgcaggtgtatatgtaaatacagcactcatatacattaagtaatt
gaataaaataatctaaagcctttaaggctggggagattgcttgcataagt
aaagtgcttgcacacaaacgtaaggacctgagtttggatcctgagcaccc
atgtaaagagcagagcctgggaggccgagacaggaggatctctggggatg
gctggataaccagtctagccaataggtgagctatagtgttttgagagata
ctgtcaaaaaataaagggaagtgattgaaaaagacactcaaattgatgtg
tgcatgtctgtctgtctgtctgtctgtctattcgtactttgtactacaaa
ggatacaggcaagaaagaaaagaaagcaaggcacattggcacaccttgca
gtctcagttactgaggaagctgagacaggagggttgtcttaagttttact
gctgttgacagacccattactaagcaggtctataaataaaccaaaataaa
acatttcttggggctggcttacaggttcagaggttcagtccattatcatc
aaggtggaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_74550756_74551944
seq2: B6Ng01-101G16.b_42_1228 (reverse)

seq1  GGCTTTCTCAGATACCATTAGTTTTTGTTAATCCCCTCTAGCCTCCTGTT  50
      ||||||||| ||| ||| ||| ||||||||||||||  ||  |||| |||
seq2  GGCTTTCTCGGATCCCA-TAG-TTTTGTTAATCCCCCTTAAGCTCCAGTT  48

seq1  CCCTTTCCCACCTTTTGCAAAAAACAATTTGATGCAATCATTGATGCTAA  100
       ||||||||||||||||||||||||||||   ||| |||  |||||||||
seq2  TCCTTTCCCACCTTTTGCAAAAAACAATTGAGTGC-ATCCATGATGCTAA  97

seq1  CTTTACTCACAATTGCTAAGTA-CTATAAATATACCAACTACCTGTCAGT  149
      ||| |||||||||||||||||| |||||||   |||||||||||||||||
seq2  CTTAACTCACAATTGCTAAGTACCTATAAAATAACCAACTACCTGTCAGT  147

seq1  TG-ATAAATGGATAAATACCTGTGATCCAGCCACATAATGAAATACGATT  198
      || ||||||| | |||||||||||||||||||||||||||||||||||||
seq2  TGAATAAATGAAAAAATACCTGTGATCCAGCCACATAATGAAATACGATT  197

seq1  CCAACAAGGAGAAGCACATGCTGGCTGCATCACGGAGAGAGATTCTTTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGGAGAAGCACATGCTGGCTGCATCACGGAGAGAGATTCTTTTT  247

seq1  GTGTACATGGATGTGGTGCTGGAGGTTGAGACCAGGGTCTGTGTACACTG  298
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTGTACATGGATGT-GTGCTGGAGGTTGAGACCAGGGTCTGTGTACACTG  296

seq1  AGAGAGTTCTAGTATAAGAGACCACACCCAGTCCCAAATAAATGGCTCTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTCTAGTATAAGAGACCACACCCAGTCCCAAATAAATGGCTCTC  346

seq1  ACTTGGATTTTTGAGACAGAGTCTCAAACAATCTAGACTGAATTTAAACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGATTTTTGAGACAGAGTCTCAAACAATCTAGACTGAATTTAAACT  396

seq1  TACTCTGTGGCTAAGGATGATTCCAAATTCCTGATCTTTCTGCATCTACC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGTGGCTAAGGATGATTCCAAATTCCTGATCTTTCTGCATCTACC  446

seq1  TCCTCAGTGCTTAGATCACAGATGTGTTTGATGGGACTAGGGAGATGGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGTGCTTAGATCACAGATGTGTTTGATGGGACTAGGGAGATGGCT  496

seq1  TAGCAGTTCCTAATGCTTACTGATCTCCTAGGCACCCACCTCATTCCATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTTCCTAATGCTTACTGATCTCCTAGGCACCCACCTCATTCCATA  546

seq1  ATTTTGTGATCTGATGCTCTCTTCTGGCCTTTGCAGTAGATAAAGCACAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGATCTGATGCTCTCTTCTGGCCTTTGCAGTAGATAAAGCACAG  596

seq1  GCTATCCAAGCCTTGTGTGCTAGGTTTTGTTTTGGTTTCTTAGGGTTTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCAAGCCTTGTGTGCTAGGTTTTGTTTTGGTTTCTTAGGGTTTTT  646

seq1  GTTTTGTTTTGTTTTGTTTTGTGTTTTGTTTTGTTGACTTGACACAGACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGTTTTGTTTTGTGTTTTGTTTTGTTGACTTGACACAGACT  696

seq1  AGCATCATCCAGGAAGAGGGAGCTTTCATTGAGAAAATGCCTCCATCAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATCCAGGAAGAGGGAGCTTTCATTGAGAAAATGCCTCCATCAGA  746

seq1  CAGTCTTTAGGCAAGTCTATGGGCATTTTCTTGATTAATGATTGATGTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTAGGCAAGTCTATGGGCATTTTCTTGATTAATGATTGATGTGG  796

seq1  GAGGGCAGAGGCCATTTAGATCAGTGCCATCCCTGGGCAGGTCGTCCTGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAGAGGCCATTTAGATCAGTGCCATCCCTGGGCAGGTCGTCCTGG  846

seq1  GCTGTAGAGCAGACTGAGCGAGCCACATAGAGCAAGCAGCACTCACCTAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGAGCAGACTGAGCGAGCCACATAGAGCAAGCAGCACTCACCTAC  896

seq1  AGCTTCCACTCCAGTTCTTGCTCCCAGGTTCCTGCCCTACTTGAGCTCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCACTCCAGTTCTTGCTCCCAGGTTCCTGCCCTACTTGAGCTCTT  946

seq1  ACCCCTGATGGGCTGTGACATGGATGAAAAAACCCTCTCCTTCGCAGCTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGATGGGCTGTGACATGGATGAAAAAACCCTCTCCTTCGCAGCTA  996

seq1  GTTTTTGGCAGTGGTGCTTATTACCACAGTAGGAAACAAGTTAGGACTAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGCAGTGGTGCTTATTACCACAGTAGGAAACAAGTTAGGACTAC  1046

seq1  CTCATGCATACTGCATGGATGTACATGTGTATGCAAAGTCACACATGTAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCATACTGCATGGATGTACATGTGTATGCAAAGTCACACATGTAC  1096

seq1  ATGCCATACGTAATAATAATAAATACATTTTTGAAATGTCAGTCATAAGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATACGTAATAATAATAAATACATTTTTGAAATGTCAGTCATAAGG  1146

seq1  TTAGGTATAGAGATCAGTAGCAGAGTACTGACCTAGAATTC  1189
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTATAGAGATCAGTAGCAGAGTACTGACCTAGAATTC  1187

seq1: chr11_74420292_74421258
seq2: B6Ng01-101G16.g_68_1028

seq1  GAATTCAAGGCCAGCCAGGTCTACATAGTGAGTTTCAGGACATCTTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGCCAGGTCTACATAGTGAGTTTCAGGACATCTTGGGC  50

seq1  TACATAGTGAGATCCTTTTCCAAAATTTTTTTTATTAATGATGGTAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGTGAGATCCTTTTCCAAAATTTTTTTTATTAATGATGGTAAAAG  100

seq1  CTGAAGAAAGCCGGGTGGTGGTGGTGCACGCCTTTAATCCCAGCACTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAAGCCGGGTGGTGGTGGTGCACGCCTTTAATCCCAGCACTTGG  150

seq1  GGGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGA  200

seq1  GTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAA  250

seq1  CCAAAAAAAAAAAAAAAAAAAAAAAAAAGCTGAAGAAAATTAATAAGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAAAAAAAAAAAAAAAAAAAAAAGCTGAAGAAAATTAATAAGTTG  300

seq1  GGTATCATCAAAATCTAAATTGGGGCTAGAGAGAGGTTCTAAATTCAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCATCAAAATCTAAATTGGGGCTAGAGAGAGGTTCTAAATTCAATT  350

seq1  CCCAGCAACCACAAGGCAATTCAGAGAATATGAGTTCTGATGCCCTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAACCACAAGGCAATTCAGAGAATATGAGTTCTGATGCCCTCTTC  400

seq1  TGGCATGCAGGTGTATATGTAAATACAGCACTCATATACATTAAGTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGCAGGTGTATATGTAAATACAGCACTCATATACATTAAGTAATT  450

seq1  GAATAAAATAATCTAAAGCCTTTAAGGCTGGGGAGATTGCTTGCATAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAATAATCTAAAGCCTTTAAGGCTGGGGAGATTGCTTGCATAAGT  500

seq1  AAAGTGCTTGCACACAAACGTAAGGACCTGAGTTTGGATCCTGAGCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTTGCACACAAACGTAAGGACCTGAGTTTGGATCCTGAGCACCC  550

seq1  ATGTAAAGAGCAGAGCCTGGGAGGCCGAGACAGGAGGATCTCTGGGGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAGAGCAGAGCCTGGGAGGCCGAGACAGGAGGATCTCTGGGGATG  600

seq1  GCTGGATAACCAGTCTAGCCAATAGGTGAGCTATAGTGTTTATGAGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCTGGATAACCAGTCTAGCCAATAGGTGAGCTATAGTGTTT-TGAGAGAT  649

seq1  ACTGTCAAAAAATAAAGGGAAGTGATTGAAAAAGACACTCAATATTGATG  700
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACTGTCAAAAAATAAAGGGAAGTGATTGAAAAAGACACTCAA-ATTGATG  698

seq1  TGTGCATGTCTGTCTGTCTGTCTGTCTGTCTATTCGTACTTTGTACTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGTCTGTCTGTCTGTCTGTCTGTCTATTCGTACTTTGTACTACA  748

seq1  AAGGATACAGGCAAGAAAGAAAAGAAAGCAAGGCACAGTGGCACACCTTG  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGGATACAGGCAAGAAAGAAAAGAAAGCAAGGCACATTGGCACACCTTG  798

seq1  CAGTCTCAGTTACTGAGGAAGCTGAGACAGGAGGGTTGTCTTAGGGTTTT  850
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  CAGTCTCAGTTACTGAGGAAGCTGAGACAGGAGGGTTGTCTTA-AGTTTT  847

seq1  ACTGCTGTGAACAGACACCATGACCAAGCAAGTCTTATAAAAAAACAAAA  900
      ||||||||  |||||| |||| || ||||| ||| |||||| |||| |||
seq2  ACTGCTGTTGACAGAC-CCATTACTAAGCAGGTC-TATAAATAAACCAAA  895

seq1  ACAAAAACATTTCTTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATT  950
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TAAAACATTTCTTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATT  944

seq1  ATCATCAAGGTGGAAGC  967
      |||||||||||||||||
seq2  ATCATCAAGGTGGAAGC  961