BAC Information

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BAC

Clone NameB6Ng01-102P01
Chromosome11 (Build37)
Map Location 8,250,438 - 8,386,171
singlet/doubletdoublet
Overlap geneLOC665380, Tns3
Upstream genenone
Downstream geneLOC638720, Pkd1l1, LOC624800, Hus1, Sunc1, OTTMUSG00000005148, Upp1, LOC626887, LOC100041469, Abca13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102P01.bB6Ng01-102P01.g
ACCDH911685DH911686
length719989
definitionDH911685|Mus musculus domesticus DNA, BAC clone: B6Ng01-102P01, 5' end.DH911686|Mus musculus domesticus DNA, BAC clone: B6Ng01-102P01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,385,457 - 8,386,171)(8,250,438 - 8,251,076)
sequence
gaattctttggggacacttttcagtggtccagtattgcttgactcgacat
atgggaggccttgggacttttccctgcaaggggtggggagctaccaggtc
acagttcttctaggacagctatactgctgtacagtcactaccatcctgtg
gcttctcaactttctctactcctcccagagaagactttaacccattagtg
atcacccaaccttagcgggcagcacactaacttacttccctagattagct
gttcttgcttctggtataaatgcagttgtatactatgtagctcttcttgg
ccggtttcttttacagagcacattatgtttaaaggtctgtgattattgga
gattcattcctgtttatggctaaataatactccatagttgatctattcat
ctatcagtgacactaggattctatcagcatttggctgttgtgaatattga
tggtatgcgcatgtgtgcacacatacctgtttgaatacctattggcttat
taccagatatggatttactgggtcacagggcggttcttgctgagtttgct
ggagaaaccacctccagccttctatatggacagcttctctccagaagcat
ttggtctgttgtcatctcgtaagagacccaggtttctaggaaggccacct
ctgagtattccatatagtggaggccaaatcccttttctcttcatctggat
gaaatagactctgacagtt

gaattcaacctctgacactttcctttaaaaaaagggaagaaatgagtgag
tgttggtctccgagaatttggcactggcactctttcccaaaagtttctta
aagctagacctgggtggaaattaccttcttgaagtgggaatttgtaatgt
ttgtctggaaattgtctaatgagaggatgtcttactgaagcagacacaca
tattgtttttctggcagctgcctggtaaaagggtatgtgatgttttgctg
gagtggacacttgagaggatgtgtgatgtttggaaagagtatcagtagaa
tccaacagacagtggatgacattcttgcattggttcgccttgcaactctt
ttgctggtcttcatcaggctttgctaaggctgttcttcactgacaacact
ctttaattggttcagcttgctttcttctctaatcttcacttgtcatgact
ttgtagaaagaaatatgccaaagaatttcgacagaggataggtgtccgcc
ggcctgggagggctttgcctgagcatctgctggagaaatcttggataccg
gactccactgagactactcttcacaggtgagagtgtggactacaaaagct
aacagcttctgggacaggcgggagccacagagcttctgaggcagccccct
tttcgggctccagacatccgggcaccatccctgccagaggagaggtgtcc
aaccggcctgggagggctttgcctgagcatctgcaggagacatcttggct
tctggactccaccgagactagtcagcacaggtgagagtgcggacaacaga
ggctaacagcttctgggacaggtcctgtttcaggccttcatcttctgcca
ggaggtaagtctgaatgccagatatcggtacaccttccctgaaagaggag
agtctacctgcagagagtgctctgaccactgaaactcagagagagctagt
ctctcggtctgctggtagagaataacagaattcatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_8385457_8386171
seq2: B6Ng01-102P01.b_45_763 (reverse)

seq1  AACTGTCAGAGTCT-CTTCATCCAGATGAAGAGAAA--GGATTTGGCCTC  47
      ||||||||||||||  ||||||||||||||||||||  ||||||||||||
seq2  AACTGTCAGAGTCTATTTCATCCAGATGAAGAGAAAAGGGATTTGGCCTC  50

seq1  CACTATATGGAATACTCAGAGGTGGCCTTCCTAG-AACCTGGGTCTCTTA  96
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CACTATATGGAATACTCAGAGGTGGCCTTCCTAGAAACCTGGGTCTCTTA  100

seq1  CGAGATGACAACAGACCAAATGCTTCTGGAGAGAAGCTGTCCATATAGAA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATGACAACAGACCAAATGCTTCTGGAGAGAAGCTGTCCATATAGAA  150

seq1  GGCTGGAGGTGGTTTCTCCAGCAAACTCAGCAAGAACCGCCCTGTGACCC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAGGTGGTTTCTCCAGCAAACTCAGCAAGAACCGCCCTGTGACCC  200

seq1  AGTAAATCCATATCTGGTAATAAGCCAATAGGTATTCAAACAGGTATGTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATCCATATCTGGTAATAAGCCAATAGGTATTCAAACAGGTATGTG  250

seq1  TGCACACATGCGCATACCATCAATATTCACAACAGCCAAATGCTGATAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACATGCGCATACCATCAATATTCACAACAGCCAAATGCTGATAGA  300

seq1  ATCCTAGTGTCACTGATAGATGAATAGATCAACTATGGAGTATTATTTAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGTGTCACTGATAGATGAATAGATCAACTATGGAGTATTATTTAG  350

seq1  CCATAAACAGGAATGAATCTCCAATAATCACAGACCTTTAAACATAATGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAACAGGAATGAATCTCCAATAATCACAGACCTTTAAACATAATGT  400

seq1  GCTCTGTAAAAGAAACCGGCCAAGAAGAGCTACATAGTATACAACTGCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTAAAAGAAACCGGCCAAGAAGAGCTACATAGTATACAACTGCAT  450

seq1  TTATACCAGAAGCAAGAACAGCTAATCTAGGGAAGTAAGTTAGTGTGCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCAGAAGCAAGAACAGCTAATCTAGGGAAGTAAGTTAGTGTGCTG  500

seq1  CCCGCTAAGGTTGGGTGATCACTAATGGGTTAAAGTCTTCTCTGGGAGGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTAAGGTTGGGTGATCACTAATGGGTTAAAGTCTTCTCTGGGAGGA  550

seq1  GTAGAGAAAGTTGAGAAGCCACAGGATGGTAGTGACTGTACAGCAGTATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGAAAGTTGAGAAGCCACAGGATGGTAGTGACTGTACAGCAGTATA  600

seq1  GCTGTCCTAGAAGAACTGTGACCTGGTAGCTCCCCACCCCTTGCAGGGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTAGAAGAACTGTGACCTGGTAGCTCCCCACCCCTTGCAGGGAA  650

seq1  AAGTCCCAAGGCCTCCCATATGTCGAGTCAAGCAATACTGGACCACTGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCAAGGCCTCCCATATGTCGAGTCAAGCAATACTGGACCACTGAA  700

seq1  AAGTGTCCCCAAAGAATTC  715
      |||||||||||||||||||
seq2  AAGTGTCCCCAAAGAATTC  719


seq1: chr11_8250438_8251076
seq2: B6Ng01-102P01.g_66_704

seq1  GAATTCAACCTCTGACACTTTCCTTTAAAAAAAGGGAAGAAATGAGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTCTGACACTTTCCTTTAAAAAAAGGGAAGAAATGAGTGAG  50

seq1  TGTTGGTCTCCGAGAATTTGGCACTGGCACTCTTTCCCAAAAGTTTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTCTCCGAGAATTTGGCACTGGCACTCTTTCCCAAAAGTTTCTTA  100

seq1  AAGCTAGACCTGGGTGGAAATTACCTTCTTGAAGTGGGAATTTGTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGACCTGGGTGGAAATTACCTTCTTGAAGTGGGAATTTGTAATGT  150

seq1  TTGTCTGGAAATTGTCTAATGAGAGGATGTCTTACTGAAGCAGACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGGAAATTGTCTAATGAGAGGATGTCTTACTGAAGCAGACACACA  200

seq1  TATTGTTTTTCTGGCAGCTGCCTGGTAAAAGGGTATGTGATGTTTTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTTTTCTGGCAGCTGCCTGGTAAAAGGGTATGTGATGTTTTGCTG  250

seq1  GAGTGGACACTTGAGAGGATGTGTGATGTTTGGAAAGAGTATCAGTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGACACTTGAGAGGATGTGTGATGTTTGGAAAGAGTATCAGTAGAA  300

seq1  TCCAACAGACAGTGGATGACATTCTTGCATTGGTTCGCCTTGCAACTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAGACAGTGGATGACATTCTTGCATTGGTTCGCCTTGCAACTCTT  350

seq1  TTGCTGGTCTTCATCAGGCTTTGCTAAGGCTGTTCTTCACTGACAACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGTCTTCATCAGGCTTTGCTAAGGCTGTTCTTCACTGACAACACT  400

seq1  CTTTAATTGGTTCAGCTTGCTTTCTTCTCTAATCTTCACTTGTCATGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTGGTTCAGCTTGCTTTCTTCTCTAATCTTCACTTGTCATGACT  450

seq1  TTGTAGAAAGAAATATGCCAAAGAATTTCGACAGAGGATAGGTGTCCGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAAAGAAATATGCCAAAGAATTTCGACAGAGGATAGGTGTCCGCC  500

seq1  GGCCTGGGAGGGCTTTGCCTGAGCATCTGCTGGAGAAATCTTGGATACCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGGAGGGCTTTGCCTGAGCATCTGCTGGAGAAATCTTGGATACCG  550

seq1  GACTCCACTGAGACTACTCTTCACAGGTGAGAGTGTGGACTACAAAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCACTGAGACTACTCTTCACAGGTGAGAGTGTGGACTACAAAAGCT  600

seq1  AACAGCTTCTGGGACAGGCGGGAGCCACAGAGCTTCTGA  639
      |||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTTCTGGGACAGGCGGGAGCCACAGAGCTTCTGA  639


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