BAC Information

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BAC

Clone NameB6Ng01-103B14
Chromosome11 (Build37)
Map Location 32,437,202 - 32,580,912
singlet/doubletdoublet
Overlap geneStk10, Fbxw11
Upstream gene2310022M17Rik, Cpeb4, 4930524B15Rik, Nsg2, LOC669207, Il9r, 3300001G02Rik, Rhbdf1, Mpg, Mare, Hba-x, Hba-a1, F830116E18Rik, Hbq1, Sh3pxd2b, Ubtd2, 1700007I06Rik
Downstream geneLOC666616, 1700008A04Rik, LOC666620, LOC670035, LOC432548, Fgf18, Npm1, LOC666646, Tlx3, Ranbp17, LOC666258, Anp32c, LOC669306, LOC666269, Gabrp, D130052B06Rik, Kcnip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103B14.bB6Ng01-103B14.g
ACCDH911795DH911796
length7601,008
definitionDH911795|Mus musculus domesticus DNA, BAC clone: B6Ng01-103B14, 5' end.DH911796|Mus musculus domesticus DNA, BAC clone: B6Ng01-103B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,437,202 - 32,437,960)(32,579,892 - 32,580,912)
sequence
gaattcaaaatgaggctcatgggtgacatgttttcagagttcttgtcgtg
agcagtcatttctgtgagatggggcagaggggagaggaagtgtttagttc
tacagtggaaggcactgtcctcagcacagtctggtgcagagggtgaggcg
atgactttgatttctggggatcgctttggcgctctaagcttttaaagggt
taattaaaatggtggggggggggtaaatgactaaaaaagaaaagaaaaga
aaagtcactgtaagttgctagcttactatgtttatattcttcagtgctga
atccaaacactgtggacactagggaaacttctcgccacgaatctgtatcc
ccagcctgggcttctttctgtgtctgttcctggttgtttgaaagagggtc
tttctgtgttccccaggctgacctcaagcacctggccttaagcaatcttc
cttccttagtcccctatgtggctggtgatacaggcacaggctgctgggct
tggcttttttttttttttttcattttattttttaaactactaacaaatcc
aatcgcacacctttaatctcagcccttgggaggtggagcaggtggatttc
tgaggcggccagcctggcatatagagtgagttccagtatagccaggacta
cacggagaagccctgtctggaaactaaacaaaacaaaaacaactaaccaa
acaaatataaataaataaataaataggattgatcaattcttattcccttt
tggactatag
gaattctctgctggccttggcctggaaaactgggtgggccctgaggacag
gtatcagatctggccttttttttttttttttgagttggctcaagctgatg
gttcccagtagcataaagctgtggtcttcataaacctccatttgtgaggt
ttgcagtacagggtttagttgtgagtcccacccccctctttttttttaaa
tgggggagaaaaggtaaaccgaaagatgtttcaaaacagaaaattgtttt
aattatgaaaccctcttaactcaaaactgttaaaggcagccaaatgggaa
atagagtattttgttttgtttttcaaaggtttaacaattaaacaaacatg
agaatcacaactttgtagtgaggggaaagaattaaagggcaggagaagaa
aggggagcaagaaagggcccttcaagacctgtttgctcagaaggccttcc
tagtactcctcctccatggggggtccaggccggaggaaagcagagggtta
cacagaacatttagcagacttaacattgcattaaacacactactgcaagt
ttcaacaaatgttcatggcatacgtaaaaacacatttacaacaagaaaga
agagaggcacctggagacatctgacactgggcatgctctgcaggcaactc
agtgcgcacatgctctctaccaggttggcgcagcctagccacaaagacct
tggcacagaacactgcaggatgacaaaaaggaaggaagagaagaagcagt
tagaggccgcaacaagtcactccttcacacaggcagcttgagtgttagtc
agggcaggggtgcacccatgcagtttagaggccagggatggtcctaagtt
tcctgaaccctggggagcaggcccttttctgtcttatggacagggttttg
cactgccaaccactcgtttcacggaatacagtaaacagatcaagaggaga
gatgcttaaatgaaaccgagagggactggagtctgagcatgagcagacac
ggagagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_32437202_32437960
seq2: B6Ng01-103B14.b_47_806

seq1  GAATTCAAAATGAGGCTCATGGGTGACATGTTTTCAGAGTTCTTGTCGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATGAGGCTCATGGGTGACATGTTTTCAGAGTTCTTGTCGTG  50

seq1  AGCAGTCATTTCTGTGAGATGGGGCAGAGGGGAGAGGAAGTGTTTAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCATTTCTGTGAGATGGGGCAGAGGGGAGAGGAAGTGTTTAGTTC  100

seq1  TACAGTGGAAGGCACTGTCCTCAGCACAGTCTGGTGCAGAGGGTGAGGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGGAAGGCACTGTCCTCAGCACAGTCTGGTGCAGAGGGTGAGGCG  150

seq1  ATGACTTTGATTTCTGGGGATCGCTTTGGCGCTCTAAGCTTTTAAAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTGATTTCTGGGGATCGCTTTGGCGCTCTAAGCTTTTAAAGGGT  200

seq1  TAATTAAAATGGTGGGGGGGGGGTAAATGACTAAAAAAGAAAAGAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAATGGTGGGGGGGGGGTAAATGACTAAAAAAGAAAAGAAAAGA  250

seq1  AAAGTCACTGTAAGTTGCTAGCTTACTATGTTTATATTCTTCAGTGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACTGTAAGTTGCTAGCTTACTATGTTTATATTCTTCAGTGCTGA  300

seq1  ATCCAAACACTGTGGACACTAGGGAAACTTCTCGCCACGAATCTGTATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAACACTGTGGACACTAGGGAAACTTCTCGCCACGAATCTGTATCC  350

seq1  CCAGCCTGGGCTTCTTTCTGTGTCTGTTCCTGGTTGTTTGAAAGAGGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTGGGCTTCTTTCTGTGTCTGTTCCTGGTTGTTTGAAAGAGGGTC  400

seq1  TTTCTGTGTTCCCCAGGCTGACCTCAAGCACCTGGCCTTAAGCAATCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGTTCCCCAGGCTGACCTCAAGCACCTGGCCTTAAGCAATCTTC  450

seq1  CTTCCTTAGTCCCCTATGTGGCTGGTGATACAGGCACAGGCTGCTGGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTAGTCCCCTATGTGGCTGGTGATACAGGCACAGGCTGCTGGGCT  500

seq1  TGGCTTTTTTTTTTTTTTTTCATTTTATTTTTTAAACTACTAACAAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTTTTTTTTTTTTTCATTTTATTTTTTAAACTACTAACAAATCC  550

seq1  AATCGCACACCTTTAATCTCAGCCCTTGGGAGGTGGAGCAGGTGGATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCACACCTTTAATCTCAGCCCTTGGGAGGTGGAGCAGGTGGATTTC  600

seq1  TGAGGCGGCCAGCCTGGCATATAGAGTGAGTTCCAGGATAGCCAGGACTA  650
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGAGGCGGCCAGCCTGGCATATAGAGTGAGTTCCAGTATAGCCAGGACTA  650

seq1  CACGGAGAAGCCCTGTCTGGAAACAAAACAAAAC-AAAACAACTAACCAA  699
      |||||||||||||||||||||||| ||||||||| |||||||||||||||
seq2  CACGGAGAAGCCCTGTCTGGAAACTAAACAAAACAAAAACAACTAACCAA  700

seq1  ACAAATATAAATAAATAAATAAATAGAATTGATCAATTCTTATCCCTTCA  749
      |||||||||||||||||||||||||| |||||||||||||||| || |  
seq2  ACAAATATAAATAAATAAATAAATAGGATTGATCAATTCTTATTCCCTTT  750

seq1  GGGACTATAG  759
       |||||||||
seq2  TGGACTATAG  760

seq1: chr11_32579892_32580912
seq2: B6Ng01-103B14.g_69_1076 (reverse)

seq1  CACTCTCCCCGGTGGTCTTGCCTCATGCTCAGACTCCCAGTTCCCTCTCG  50
      ||||||||   || ||||   |||||||||||||| |||| |||||||||
seq2  CACTCTCC---GT-GTCT--GCTCATGCTCAGACT-CCAG-TCCCTCTCG  42

seq1  GGTTTTCATTTAAGCATTCTCTCCCTCTTGATTCTGTTTACTGTATTCCG  100
      |  ||||||||||||| ||||| |||||||| ||||||||||||||||||
seq2  G--TTTCATTTAAGCA-TCTCT-CCTCTTGA-TCTGTTTACTGTATTCCG  87

seq1  TGAAACGAGTGGTTGGCAGTGCAAAACCCTGTCCATAAGACAGAAAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACGAGTGGTTGGCAGTGCAAAACCCTGTCCATAAGACAGAAAAGGG  137

seq1  CCTGCTCCCCAGGGTTCAGGAAACTTAGGACCATCCCTGGCCTCTAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCCCCAGGGTTCAGGAAACTTAGGACCATCCCTGGCCTCTAAACT  187

seq1  GCATGGGTGCACCCCTGCCCTGACTAACACTCAAGCTGCCTGTGTGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGTGCACCCCTGCCCTGACTAACACTCAAGCTGCCTGTGTGAAGG  237

seq1  AGTGACTTGTTGCGGCCTCTAACTGCTTCTTCTCTTCCTTCCTTTTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTTGTTGCGGCCTCTAACTGCTTCTTCTCTTCCTTCCTTTTTGTC  287

seq1  ATCCTGCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCAGTGTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCT  337

seq1  GGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGAGCATGTGCGCACTGAGTTGCCTGCAGAGCATGCCCAGTGTCA  387

seq1  GATGTCTCCAGGTGCCTCTCTTCTTTCTTGTTGTAAATGTGTTTTTACGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTCCAGGTGCCTCTCTTCTTTCTTGTTGTAAATGTGTTTTTACGT  437

seq1  ATGCCATGAACATTTGTTGAAACTTGCAGTAGTGTGTTTAATGCAATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATGAACATTTGTTGAAACTTGCAGTAGTGTGTTTAATGCAATGTT  487

seq1  AAGTCTGCTAAATGTTCTGTGTAACCCTCTGCTTTCCTCCGGCCTGGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGCTAAATGTTCTGTGTAACCCTCTGCTTTCCTCCGGCCTGGACC  537

seq1  CCCCATGGAGGAGGAGTACTAGGAAGGCCTTCTGAGCAAACAGGTCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGGAGGAGGAGTACTAGGAAGGCCTTCTGAGCAAACAGGTCTTGA  587

seq1  AGGGCCCTTTCTTGCTCCCCTTTCTTCTCCTGCCCTTTAATTCTTTCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCTTTCTTGCTCCCCTTTCTTCTCCTGCCCTTTAATTCTTTCCCC  637

seq1  TCACTACAAAGTTGTGATTCTCATGTTTGTTTAATTGTTAAACCTTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTACAAAGTTGTGATTCTCATGTTTGTTTAATTGTTAAACCTTTGAA  687

seq1  AAACAAAACAAAATACTCTATTTCCCATTTGGCTGCCTTTAACAGTTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAATACTCTATTTCCCATTTGGCTGCCTTTAACAGTTTTG  737

seq1  AGTTAAGAGGGTTTCATAATTAAAACAATTTTCTGTTTTGAAACATCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGAGGGTTTCATAATTAAAACAATTTTCTGTTTTGAAACATCTTT  787

seq1  CGGTTTACCTTTTCTCCCCCATTTAAAAAAAAAGAGGGGGGTGGGACTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTACCTTTTCTCCCCCATTTAAAAAAAAAGAGGGGGGTGGGACTCA  837

seq1  CAACTAAACCCTGTACTGCAAACCTCACAAATGGAGGTTTATGAAGACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAAACCCTGTACTGCAAACCTCACAAATGGAGGTTTATGAAGACCA  887

seq1  CAGCTTTATGCTACTGGGAACCATCAGCTTGAGCCAACTCAAAAAAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTATGCTACTGGGAACCATCAGCTTGAGCCAACTCAAAAAAAAAA  937

seq1  AAAAAAGGCCAGATCTGATACCTGTCCTCAGGGCCCACCCAGTTTTCCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGCCAGATCTGATACCTGTCCTCAGGGCCCACCCAGTTTTCCAG  987

seq1  GCCAAGGCCAGCAGAGAATTC  1021
      |||||||||||||||||||||
seq2  GCCAAGGCCAGCAGAGAATTC  1008