BAC Information

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BAC

Clone NameB6Ng01-103J13
Chromosome11 (Build37)
Map Location 30,649,933 - 30,651,072
singlet/doubletsinglet
Overlap genenone
Upstream geneC230094A16Rik, 4931440F15Rik, Spnb2, EG666427, LOC666432, 4930505A04Rik, Acyp2, LOC654445, LOC666452, LOC666470
Downstream geneLOC631243, Psme4, Gpr75, LOC100042469, 4933407N01Rik, Asb3, Chac2, Stc2, 2310022M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103J13.bB6Ng01-103J13.g
ACCDH912133DH912134
length1,2461,119
definitionDH912133|Mus musculus domesticus DNA, BAC clone: B6Ng01-103J13, 5' end.DH912134|Mus musculus domesticus DNA, BAC clone: B6Ng01-103J13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgtaattcttaggcaaatggatggaattataaaatttcattct
gagtgaggtaatccagtcacaaaagaatacacatggtatacactcactga
taagtggttattagcccaaaagcttagaacatccaagatacaattcacag
accacatgaagctcataaaaaatgagtagaccaatggaacagaattgaag
acccagagatgaatccacacacctatggtcacttgatctttgacaaggga
gctaaaaccatccagtggaaaaaagacagcattttcaacaaatggtgctg
gcacaactggcggttatcatgtagaagaatgagaattgatccatttctat
ctccttgtactaaggtcaaatctaagtggattaaggaactccacataaaa
ccagagacactgaaacttatagaggagaaaatagggaaaagcctcgaaga
tatgggtacaggggaaaaattcctggatagaacagcaatggcttgtgctg
taagatcaagaatcgataaatgggacctcataaaattgcaaagcttctgc
aaagcaaaagacaccgtcaataagacaaaaaggccaccaacagattggga
aaggatctttacctatcccaaatcggataggggactaatatccaatatat
ataaagaactcaagaaggtggactccagaaaatcaaataaccccattaaa
aatggggctcagaactgaacaaagaattctcacctgaggaataccgaatg
gcagagaagcacctgaaaaaatgttcaacatccttaatcatcagggaaat
gcaaatcaaaacaacactgagattccacttcactccagtcagaatggcta
agatcaaaaactcaggtgacagcagatgctggcgaggatgtggagaaagg
ggaacactcctccattgttggtgggattgcaagcttgtacaccactctgg
aaatcagtctggcggttcctcagaaattggacatagtactaccggaggac
cccgcatactctctgggcatatatccagaagatgtcccatcggtagaagc
acacatgctccactatgttcatagcagccttgttatatagccagaagctg
gaaggaccagatgccctcacgaggattgatacgaaaatgtggtaataccc
atggaatactaactcagctatttaaattgattatgatctaggcaatggat
tgaactgggaggcatacttctggtagtgagtactcatctccaccag
gaattcttatcagtcttgtggttcatatatccagataccccaagccagaa
aaacaggtaaagcaataagaaacagagtaaaaactagaatggaaaacata
gagccaaacaacagaaaatatgagacagcaacatttaacaactgcagccc
tctgctttactagttcaccagtctgatcaagagaaaaatttttatagctt
tcttgtaaaaccaactagaggctggggctctctgagttcttggttctgag
atccattctgggtccttctaaaccctaggctttgctcccagtgtcaggaa
ttcctgagctctattgtgtaacttaggcattggaatcctgtcaacaggca
ccatggggtcctctggggcccaaagcaggtcagaaaagaaaagcttttgt
tgccctgataattaaggtcaaaaatctaccattgtctggatagccttctg
gacttggtacaagtccctttaccatcatagctcctcaatctctgaccttg
tctggggtgttcaaacaaaacacacacacacacacctctacctgtggaat
gtcacatagctatggttagattacaggttcagcttcctttctcctgatag
gaacctgttagcacctgggattcctgaaatgcttctccatgctaatgaga
catcttggtaccttacacccaattacctttgcctatccatactcctaccc
ccccccctcccacaaaattataaaacccttgagtcacctcaaggaaactt
gatctgtctccccacagctggtcccagtgtgtcatcattaccatatgtac
tcacagggtttctgaaccgccccatccattgtctccgctccatttaccct
catggactaatattgcccaatgagtcacagctggcggcactggatgaact
ccaattaaccaaaataccagtgggctctctcctgtaaaggaatttagatg
tttgctacccagtataaaagacacacaatccaggtgttttacttacagct
gtaagcctagattgggcaggtttgagctacatctcagtcaatgctctgta
atactgttttcctacgtgtgctcatggtcatctcctctatggctgttcct
cccgattgtctccctcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_30649933_30651072
seq2: B6Ng01-103J13.g_70_1188 (reverse)

seq1  AAGGAGGGAGGACAAAACGGGGAGGAAACAGCCATGAGAGGAGATGAACC  50
      ||||||||||   | ||  |||||| ||||||||| |||||||||| |||
seq2  AAGGAGGGAG---ACAATCGGGAGG-AACAGCCAT-AGAGGAGATG-ACC  44

seq1  ATGAGCACACGGTTAGGAGAAACAGTATGTAACAAGGAGCATTTGACTGA  100
      |||||||||||  ||||| ||||||||  | |||  ||||| ||||||||
seq2  ATGAGCACACG--TAGGA-AAACAGTA--TTACA--GAGCA-TTGACTGA  86

seq1  GATGTAGCTCCAAAACCTGCCCAATCTAGGCTTACAGCTTGTAAGTAAAA  150
      ||||||||||  |||||||||||||||||||||||||| |||||||||||
seq2  GATGTAGCTC--AAACCTGCCCAATCTAGGCTTACAGC-TGTAAGTAAAA  133

seq1  CACCTGGATTGTGTGTCTTTTATACTGGGTAGCAAACATCTTAAATTCCT  200
      |||||||||||||||||||||||||||||||||||||||| |||||||| 
seq2  CACCTGGATTGTGTGTCTTTTATACTGGGTAGCAAACATC-TAAATTCC-  181

seq1  TTTACAGGAGAGAGCCCACTGGTTATTTTTGGTTAATTGGAGTTCATCCA  250
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  TTTACAGGAGAGAGCCCACTGGT--ATTTTGGTTAATTGGAGTTCATCCA  229

seq1  GTGCCGCCAGCTGTGACTCATTGGGCAATATTAGTCCATGAGGGTAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCGCCAGCTGTGACTCATTGGGCAATATTAGTCCATGAGGGTAAATG  279

seq1  GAGCGGAGACAATGGATGGGGCGGTTCAGAAACCCTGTGAGTACATATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGGAGACAATGGATGGGGCGGTTCAGAAACCCTGTGAGTACATATGG  329

seq1  TAATGATGACACACTGGGACCAGCTGTGGGGAGACAGATCAAGTTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGACACACTGGGACCAGCTGTGGGGAGACAGATCAAGTTTCCTT  379

seq1  GAGGTGACTCAAGGGTTTTATAATTTTGTGGGAGGGGGGGGGGTAGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGACTCAAGGGTTTTATAATTTTGTGGGAGGGGGGGGGGTAGGAGT  429

seq1  ATGGATAGGCAAAGGTAATTGGGTGTAAGGTACCAAGATGTCTCATTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAGGCAAAGGTAATTGGGTGTAAGGTACCAAGATGTCTCATTAGC  479

seq1  ATGGAGAAGCATTTCAGGAATCCCAGGTGCTAACAGGTTCCTATCAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAAGCATTTCAGGAATCCCAGGTGCTAACAGGTTCCTATCAGGAG  529

seq1  AAAGGAAGCTGAACCTGTAATCTAACCATAGCTATGTGACATTCCACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGCTGAACCTGTAATCTAACCATAGCTATGTGACATTCCACAGG  579

seq1  TAGAGGTGTGTGTGTGTGTGTTTTGTTTGAACACCCCAGACAAGGTCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTGTGTGTGTGTGTGTTTTGTTTGAACACCCCAGACAAGGTCAGA  629

seq1  GATTGAGGAGCTATGATGGTAAAGGGACTTGTACCAAGTCCAGAAGGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAGGAGCTATGATGGTAAAGGGACTTGTACCAAGTCCAGAAGGCTA  679

seq1  TCCAGACAATGGTAGATTTTTGACCTTAATTATCAGGGCAACAAAAGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACAATGGTAGATTTTTGACCTTAATTATCAGGGCAACAAAAGCTT  729

seq1  TTCTTTTCTGACCTGCTTTGGGCCCCAGAGGACCCCATGGTGCCTGTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTGACCTGCTTTGGGCCCCAGAGGACCCCATGGTGCCTGTTGA  779

seq1  CAGGATTCCAATGCCTAAGTTACACAATAGAGCTCAGGAATTCCTGACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTCCAATGCCTAAGTTACACAATAGAGCTCAGGAATTCCTGACAC  829

seq1  TGGGAGCAAAGCCTAGGGTTTAGAAGGACCCAGAATGGATCTCAGAACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCAAAGCCTAGGGTTTAGAAGGACCCAGAATGGATCTCAGAACCA  879

seq1  AGAACTCAGAGAGCCCCAGCCTCTAGTTGGTTTTACAAGAAAGCTATAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAGAGAGCCCCAGCCTCTAGTTGGTTTTACAAGAAAGCTATAAA  929

seq1  AATTTTTCTCTTGATCAGACTGGTGAACTAGTAAAGCAGAGGGCTGCAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTCTTGATCAGACTGGTGAACTAGTAAAGCAGAGGGCTGCAGT  979

seq1  TGTTAAATGTTGCTGTCTCATATTTTCTGTTGTTTGGCTCTATGTTTTCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATGTTGCTGTCTCATATTTTCTGTTGTTTGGCTCTATGTTTTCC  1029

seq1  ATTCTAGTTTTTACTCTGTTTCTTATTGCTTTACCTGTTTTTCTGGCTTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGTTTTTACTCTGTTTCTTATTGCTTTACCTGTTTTTCTGGCTTG  1079

seq1  GGGTATCTGGATATATGAACCACAAGACTGATAAGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCTGGATATATGAACCACAAGACTGATAAGAATTC  1119