BAC Information

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BAC

Clone NameB6Ng01-106N07
Chromosome11 (Build37)
Map Location 4,439,537 - 4,440,296
singlet/doubletsinglet
Overlap geneMtmr3
Upstream geneMap1lc3-5, LOC625608, Tug1, Morc2a, LOC664900, Osbp2, LOC664920, 4921536K21Rik, Dusp18, Slc35e4, Tcn2, LOC100041720, Pes1, Gal3st1, Sec14l4, Sec14l3, 1700020C11Rik, Sec14l2, LOC625729, Rnf215, 4930562D19Rik, Sf3a1, Tbc1d10a, 2410008K03Rik, LOC625760, Osm, Lif, Hormad2
Downstream geneLOC100041006, OTTMUSG00000005065, Ascc2, 1110020P15Rik, Zmat5, Cabp7, Nf2, Nipsnap1, Thoc5, Nefh, Ap1b1, Rasl10a, Gas2l1, Ewsr1, Rhbdd3, Emid1, Kremen1, Znrf3, LOC100042016, LOC382478, Xbp1, Ccdc117
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106N07.bB6Ng01-106N07.g
ACCDH914459DH914460
length1,222841
definitionDH914459|Mus musculus domesticus DNA, BAC clone: B6Ng01-106N07, 5' end.DH914460|Mus musculus domesticus DNA, BAC clone: B6Ng01-106N07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgaaagaccacagattacaaccccgactaaccagctaaacttcc
catcacaattgatggagaaagaaaaaaaaagtttcaagggaaaaaaaaaa
acaaatttaaacaatttctgtccacaaattaaattctacagaaggcacta
gaaagaaaaaaaatctgtccgaaataaaaattagtgacacctgagagggc
aaaaatgataagcaatcgcagaacagttaatcaaacaaagaggaggggga
tgtgaactcacctaaacaaaataatagaaattaataaacactgcttaaaa
ataactttcaataacaattgtcttaatttcctaattaaaaaaaagacaca
ggaaaacaggatctaactttttgctctacaaaagaaacacacctcaccac
caaagacgcctttatcttaggataaaaggatgtaaaaagatattataagt
aaaaagaaccaagaagcaagtaggcatagatattttaatatctgaaaaaa
cagatttcaaacaaaaactaatcagaaaagatgggaaggatactacatat
acactaaaaaaaaaaatccacaaagagtataattctaaacatttatgcac
caaacacaaggatgcccaatttcataagtgaaacactactacagctaaaa
atatatattgatcctcacaaagtgatgatgggtgattttaatacctgact
ctttgcagtagataggtcatccagaaaaaaactaaatgtagaaatggtag
agttaagtaacatctaaatcaaatgtacctagcagacatctacggaacac
ttcacccagatattaaatatgccttctcagcagcctttggaacctactcc
acacttgatcttaggcaaaaggcagagaagcgattggaacctactccaag
actgcacatatgaggacacaaaccaagtctcacagatacagaaaattgaa
ataacaccttgcctcttatctgattaccttgggtatcaacagatcaaaga
gcagagtatacaaactcaggagctacttacactgatgatatagatcagaa
gaatctagtagaaatttaactttagactgatcaatgaaacactacgacca
ttggagacggttctagagcattctgcactatggctataacaacaccaatc
ttgagattcaatatacctagccttgaacccgaagacatatttctagaaga
tgggaagaataacaaacttcag
gaattcccagagatcttcctgtctctgctgagattaaatgtgtgtgccac
cacaccccactcattttttatttgcgtatattaagcatatataacaatgg
acaaaatatatacatttttcagacatgcatatattttgggtatgcttgcc
cccagagcctttttgtcctttatactgtctcactaattcttatgtcatgt
ctttcctttccttcatctctctccccctttttccccttccttcctccttt
cacaacccactgagtttatttagggctgcctgagtgaaatgttatttatg
atcaccttactagtggctgtactactgaagaaaatgcctctcctgtctcc
agccccattacctttgtttacattgtcaggaaaggatggggcctcttggc
cctatgatctgtacctcttgtcctccccacatgccactcttgatactgtt
gaccagccttgtgttcagttactgagagtttgagagtgcagtagcctggc
tggggagatggctcagaggataaagggtttctgtgcaaacatgaagtcca
gaggttagatctccagcaccaaataaaagctgcttttctctaattctagt
gcttcagagtcacagactggtgcaaactggctagctagagaatgaaatca
gtgaacccccagttcagcagcagatcctgccttagtaaataaagtggtga
gtgatttagatacccactgtcaacctttggcttccaacttcatgtgtgta
catgcaccaacacgtgagaatacatgcatgcacacatacttgaataccac
aaacacaggttgagggggggtgtctgttggggggtagaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_4439537_4440296
seq2: B6Ng01-106N07.g_151_911 (reverse)

seq1  CCTTCTACCCCCC-ACAGACACCCCCCCTCAACCTGTGTTTGTGGTATTC  49
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCTTCTACCCCCCAACAGACACCCCCCCTCAACCTGTGTTTGTGGTATTC  50

seq1  AAGTATGTGTGCATGCATGTATTCTCACGTGTTGGTGCATGTACACACAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGTGTGCATGCATGTATTCTCACGTGTTGGTGCATGTACACACAT  100

seq1  GAAGTTGGAAGCCAAAGGTTGACAGTGGGTATCTAAATCACTCACCACTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGGAAGCCAAAGGTTGACAGTGGGTATCTAAATCACTCACCACTT  150

seq1  TATTTACTAAGGCAGGATCTGCTGCTGAACTGGGGGTTCACTGATTTCAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTAAGGCAGGATCTGCTGCTGAACTGGGGGTTCACTGATTTCAT  200

seq1  TCTCTAGCTAGCCAGTTTGCACCAGTCTGTGACTCTGAAGCACTAGAATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGCTAGCCAGTTTGCACCAGTCTGTGACTCTGAAGCACTAGAATT  250

seq1  AGAGAAAAGCAGCTTTTATTTGGTGCTGGAGATCTAACCTCTGGACTTCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGCAGCTTTTATTTGGTGCTGGAGATCTAACCTCTGGACTTCA  300

seq1  TGTTTGCACAGAAACCCTTTATCCTCTGAGCCATCTCCCCAGCCAGGCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCACAGAAACCCTTTATCCTCTGAGCCATCTCCCCAGCCAGGCTA  350

seq1  CTGCACTCTCAAACTCTCAGTAACTGAACACAAGGCTGGTCAACAGTATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTCTCAAACTCTCAGTAACTGAACACAAGGCTGGTCAACAGTATC  400

seq1  AAGAGTGGCATGTGGGGAGGACAAGAGGTACAGATCATAGGGCCAAGAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGGCATGTGGGGAGGACAAGAGGTACAGATCATAGGGCCAAGAGG  450

seq1  CCCCATCCTTTCCTGACAATGTAAACAAAGGTAATGGGGCTGGAGACAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCCTTTCCTGACAATGTAAACAAAGGTAATGGGGCTGGAGACAGG  500

seq1  AGAGGCATTTTCTTCAGTAGTACAGCCACTAGTAAGGTGATCATAAATAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCATTTTCTTCAGTAGTACAGCCACTAGTAAGGTGATCATAAATAA  550

seq1  CATTTCACTCAGGCAGCCCTAAATAAACTCAGTGGGTTGTGAAAGGAGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCACTCAGGCAGCCCTAAATAAACTCAGTGGGTTGTGAAAGGAGGA  600

seq1  AGGAAGGGGAAAAAGGGGGAGAGAGATGAAGGAAAGGAAAGACATGACAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGGAAAAAGGGGGAGAGAGATGAAGGAAAGGAAAGACATGACAT  650

seq1  AAGAATTAGTGAGACAGTATAAAGGACAAAAAGGCTCTGGGGGCAAGCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTAGTGAGACAGTATAAAGGACAAAAAGGCTCTGGGGGCAAGCAT  700

seq1  ACCCAAAATATATGCATGTCTGAAAAATGTATATATTTTGTCCATTGTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAAATATATGCATGTCTGAAAAATGTATATATTTTGTCCATTGTTA  750

seq1  TATATGCTTAA  760
      |||||||||||
seq2  TATATGCTTAA  761